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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051820 ID=TCONS_00051820|Name=TCONS_00051820|organism=Clytia hemisphaerica|type=transcript|length=973bp
ttcgttgaatttggatcaatttctaaacacctgatcttatgaccggacat
gtcaatgattaattgtggacaaaatttattgacaacaagggcgtggcttC
GATGCTAATTTCATTGTGAGAGACGAGCCTCTAAAGACATTGATAAAGTC
TACCACTACAAGGTCGGAAAGAATACAGGCCATTATGCATGCATCCTACA
AAAGATTTGTTAAAGATGCAGAAGAGGAGTTGGACATTTTTGGTCTGTCG
TATTAACAGAGCCAATCTTACACCTTACGCATCATTGAAGGCCTAACCTA
TAGAGAGAAAGTTGACCCTGATGATCTCACTAGTTTTGGTGGGAAACAGC
GACTGCCCATCGTCTTCAACAGACAAAACTATCTCGAGACGGTCCAGTAT
TGTGTTCTTCCCGAGCTGCTGATACACTTTCAAATGGAAAACTTCCATCT
GACGTATCAGCAAGCTACAGAAAAACTTTATGGAAACCGCAGAATGACCA
CCCACCATGTGAATTTACTTTTATGCGTAAGGAGACTTCCACTATTTTTT
GCTCAAGAATTTCAGATACATATGAAATTGGCTTTTATTTTCCGAGACAG
GTAATGCAACAAGAATTCAACGTGCACTAATATCTAGTagaatcagcatg
aaaaactaAATTATCCAGTAAGACCACACGAACCAGTTAAgtatattttt
cttaaaacgaTTTGAATGATAACAATCCTAAGTGACAAGTGCGGGTATCT
TTTACAGCAACGAAAAACGGATGGGGCATCCTTCAATGGCATATTCATCC
AATGTAGAGCGGCAGATATCCTGTTGGAAAAACGAACAGATGCTTTAGTT
TTCAAGACGAACAAAAACTTTATCCCGATGAAAGTTGTAAGAGTTCTTTA
GTTACGAGATCCTTTTTCTTAACAAAAAAGTACTAAATATATCTTTCAGA
ACGAAGGCCAACCACCATAAATC Run BLAST on NCBI transcript from alignment at scaffold_205:269527..270499+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051820 ID=TCONS_00051820|Name=TCONS_00051820|organism=Clytia hemisphaerica|type=transcript|length=973bp|location=Sequence derived from alignment at scaffold_205:269527..270499+ (Clytia hemisphaerica)
ttcgttgaatttggatcaatttctaaacacctgatcttatgaccggacat
gtcaatgattaattgtggacaaaatttattgacaacaagggcgtggcttC
GATGCTAATTTCATTGTGAGAGACGAGCCTCTAAAGACATTGATAAAGTC
TACCACTACAAGGTCGGAAAGAATACAGGCCATTATGCATGCATCCTACA
AAAGATTTGTTAAAGATGCAGAAGAGGAGTTGGACATTTTTGGTCTGTCG
TATTAACAGAGCCAATCTTACACCTTACGCATCATTGAAGGCCTAACCTA
TAGAGAGAAAGTTGACCCTGATGATCTCACTAGTTTTGGTGGGAAACAGC
GACTGCCCATCGTCTTCAACAGACAAAACTATCTCGAGACGGTCCAGTAT
TGTGTTCTTCCCGAGCTGCTGATACACTTTCAAATGGAAAACTTCCATCT
GACGTATCAGCAAGCTACAGAAAAACTTTATGGAAACCGCAGAATGACCA
CCCACCATGTGAATTTACTTTTATGCGTAAGGAGACTTCCACTATTTTTT
GCTCAAGAATTTCAGATACATATGAAATTGGCTTTTATTTTCCGAGACAG
GTAATGCAACAAGAATTCAACGTGCACTAATATCTAGTagaatcagcatg
aaaaactaAATTATCCAGTAAGACCACACGAACCAGTTAAgtatattttt
cttaaaacgaTTTGAATGATAACAATCCTAAGTGACAAGTGCGGGTATCT
TTTACAGCAACGAAAAACGGATGGGGCATCCTTCAATGGCATATTCATCC
AATGTAGAGCGGCAGATATCCTGTTGGAAAAACGAACAGATGCTTTAGTT
TTCAAGACGAACAAAAACTTTATCCCGATGAAAGTTGTAAGAGTTCTTTA
GTTACGAGATCCTTTTTCTTAACAAAAAAGTACTAAATATATCTTTCAGA
ACGAAGGCCAACCACCATAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051820-exon-scaffold_205-1491911889:269527..270499 | TCONS_00051820-exon-scaffold_205-1491911889:269527..270499 | Clytia hemisphaerica | exon |
| TCONS_00051820-exon-scaffold_205-1510915933:269527..270499 | TCONS_00051820-exon-scaffold_205-1510915933:269527..270499 | Clytia hemisphaerica | exon |
| TCONS_00051820-exon-scaffold_205-1575043694:269527..270499 | TCONS_00051820-exon-scaffold_205-1575043694:269527..270499 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_205 | supercontig | scaffold_205:269527..270499 + |
Blast
The following BLAST results are available for this feature:
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