TCONS_00051800 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051800
Unique NameTCONS_00051800
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1911

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051800 ID=TCONS_00051800|Name=TCONS_00051800|organism=Clytia hemisphaerica|type=transcript|length=1911bp
AGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGAAATCGAGGCTTTC
GTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAAACACTACATTGTA
TCTTTCAATGATGGTGTACTTATCACAGATTGTCCAATCTCTCTGCATCA
AATATGAAAGTGAGCATTACAGGAGACTTCAAGACACCTTGATTGATGGT
AAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGAATGATATCTGGCC
AGGCCCTTCATGGTCATCTCTTGAATATAATGGACAATGGAAGATTTTGC
ATTATGACGTTGAGAAATTCTTTGCACCAACCTCACTGAGTGCTTACCGT
AACAAGGATTCCATTGTTGTCAACATTGTGCGAGATCATatttcaaatga
gaaaaaactgCTGTGCAATATCTCATTTCACGATTGGAAAGAATTTGGTA
TTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCAATCAGCATTCT
ATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAACTACCTGAATCTTC
TTACATGACTGCTCAATTGATGGACTTTGAAACTGGTGACGTCGTATCCA
GTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATACGCTGAAAAACCCT
AATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGTGTGGA
TTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTGGCTAG
ATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAAACACA
CCGACTAGAAGGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCA
GAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCT
GGCATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAAT
AGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTA
TTCccatttcaattttgtttgtgtttacctttaaaagctatttcaaaagt
aaaaaaagcaaaacaaaatgccAGCCATTTTTGATAAAGCAGAAGATTGT
CGCCCAGAATGGACCAATGCCAAAGCTGAATTCGATGATGTGGATGAGCA
TTTGGTTATCTGTGGAAAACCCGTCATGGAAAGATGGGAAACCCCTTACA
TGCATGCATTAGCTGATATTGCTGCTAGCAGAGGTGGTCGTGTTCTCGAG
CTTGGATTCGGAATGGCAATCTCCGGATCACGTATTGAAACGTACAAAGT
GGACGAGCACGTGATCGTTGAATGCAACGATGGAGTgttcgaaaaattga
aagtctTTGCTAAAAATGCACCGAACAAAGTGACACCCTTGAAAGgattt
tggCAAGATGTTGTTCCCACTTTACCTGACGCAAGTTTTGACGCCATTTT
GTATGACACTTTTCCCTTGTCGGACGACACGTGGCATACACATCAATTCG
AATTCATCAATGGGCATGCGCAAAGGCTACTCAAACCAGGTGGTATTTTG
ACTTATTGCAATCTAACATCATGGGGAGAAAATTTAAAAGGGCAATATGA
TGATATCGAAAAAATGTTCCGAGAAACGCAAATTCCGAAATTGGAAGAAG
CAGgatttaaaaaggaaaatatttcttggagGCTTTTGGATATTGTTCCA
GAAAAAGAATGCAGATATTATCAATTTAACAAAATGTTGGCACCAACTTG
TGTCAAAAAATAAACTGTATATGACCTCGTGTTAAAAGGGCACTAGCTTT
GTTAATATTGTTTGTCATTGATATCTACTCTACGTATTTTTCTTTATGTa
actttgtatatttttttttttcatttttgacagcaaagatattcttcatt
tttcttaatca
Run BLAST on NCBI

transcript from alignment at scaffold_205:24215..42216+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051800 ID=TCONS_00051800|Name=TCONS_00051800|organism=Clytia hemisphaerica|type=transcript|length=18002bp|location=Sequence derived from alignment at scaffold_205:24215..42216+ (Clytia hemisphaerica)
AGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGAAATCGAGGCTTTC
GTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAAACACTACATTGTA
TCTTTCAATGATGGTGTACTTATCACAGATTGTCCAATCTCTCTGCATCA
AATATGAAAGTGAGCATTACAGGAGACTTCAAGACACCTTGATTGATGGT
AAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGAATGATATCTGGCC
AGGCCCTTCATGGTCATCTCTTGAATATAATGGACAATGGAAGGTAATAT
TATATCAAAACTTCTatagttgatgctctctaattcgattggATTGGATT
TTAATCCaataagggagcgtattgaATAATAGATTTTTATGTCGTCTGTG
ACTTTTAATATTATCGAGTAATGGAGCgcatcgaatagtagaaagtcgaa
taagagagcatcaactatatttttttttatttcatttataaccgtattac
ttcaaataatgcccccttcttttaaacgcccctcaaataaacgccctctT
TGAATAAACGCCTCCCCACTAGGAAGGGCGTTTACTTCAATGGGATTAAT
TtcgtggggattaaatttcgcggtttagcTCATCTGCGAAATTTNNNNNN
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aatgtagcatctttaatggtaaatctTTTTGGTTTGTCGTTatacttctc
agtgcgttttagacattaatgatatgcccttgataatacacttgcattat
aaaatcattgtaaaggagagatcaacaataagaaatttaaacaagcacaa
aatggctgggctgaaagaactcaaaaattaataaagtgcctcgaaatgcc
ttcactACATTTCagtgaatttttttagaaatcaatgaaaaagtacatca
agataatactgtgaaaatttaaagccagcaccaaaatttatcattcaaac
tgacaggaaagttgtgagagtaagtaagtatttatttatcatttaacact
acaaaaaagatacaagtgatgatatgcacaaaaaatatatgaagggagac
cgccttatagtctagctaatcaaaaagatgcggccacctaagtACAGATT
Gcgtttataacacttcatgaattatttataaatatttatatatcttgaat
atagttcttataattttaaatctggcgaaaaactattgtttccacaaaat
acccctagaatatgtccaaaattacttcaagtgttctattgggtacagat
taagatatctagcaatgagaaaactttttttgaaggaaaataataAACTG
ACAATCTTGATGCTCTGATAAAGGtcggagacagagatagaacagcaatt
aactgaaaagacaatgcggtacatattccagccgcggttTTTTTATATAC
TATGGTTTCTCTTCAATGTCTTCTTTCCTAGTACACAATTATTCTTTTCA
ATGATTTCATTTGGCCTTCTTGATAGACCGTTAAAAAATTTCTTCGTATG
CAAACTACGGATGTGGCAAATCATTCCTTCTACAAGAATGCAAGTTGATG
TATTCGTTCTTTTTATAAAGTTTGACAGAGAATAATTACTTGTGGTTTTG
CTCTTTTGCTCCCTTTTAACCGTTCAGAATTCCCTTTTGACAAATTTGAT
GCAATGATTgatgttatctttttttctctttcattgCATCCTGTGTGAGA
TGtaatcataatttttttgaattagcCCGATATATGCTATTTTATATGAA
TGGACTCGAATGACATACTggccaaaatataaaaaatataccgTCAACTT
ATTTGTAataaatggctgtaacttttgatagaattcgaatcaagttgcgg
ttGTGTGCTCGTTAAatagatattcgtgagtggaatattatcaagtaaaa
aaattgagatttagggcattttccaaacatttttatATGTACTTAATGGT
CAATGGTTCTTCGTCGTTGCTCAAGATTTTCAGAAACACACCATATATTT
ACATATACACgaacgtccaaagttttgaagcgttcggatgttcttaacat
tttgagttttaagcctaaaaatgttcttagcatgttcttattttcgtcat
ttttgataactttgtcCATTTGCCTataaaattgggtgttttacaGTCCG
CGAAGCCTAacattcttaacttgttcctaacattttggtcatcgaagcct
tatgtatgttcttatatagttttagAAAGTTTTAGTCAAGTAGATCAGCT
AATTTGACATTGAATTATGTCACTAATATGTGAAAATAGTCAATATAGGA
GATTTTTGTCctgaaaaagaaacattttcaatCCATTCGGCTCTTTCCTC
TGTGAAAACTTACCTTTATGCCTAATCATGATATTTGTAGAAATTGTTCG
CAGTGTTCTTTATCGGCaagtatttttctttctgtttacaGATTTTGCAT
TATGACGTTGAGAAATTCTTTGCACCAACCTCACTGAGTGCTTACCGTAA
CAAGGATTCCATTGTTGTCAACATTGTGCGAGATCATatttcaaatgaga
aaaaactgCTGTGCAATATCTCATTTCACGATTGGAAAGAATTTGGTATT
TTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCAATCAGCATTCTGT
AATCTATCGTTACTTTTATTTGTTTCTTGATTTATAGGGGAATACAAGCA
TTGCTACGGATGAGAAACAGCTGAGGGCTAAAAAGGAATCTTAAGATACC
TTGGATTTCGGCTTATAGATTTAATCTAGAGCCTTTTTTATTTATGTACA
CATTTTCAAGAGGATAGGACCTTCGCCTCTAGCCTATGGCTATATCTCAC
CGATTATTACAATATATTTCGGTCGATTTTATCTTATCTCAGATGGTAAA
TCTTGAGAAGTGATAAACTTCATTCCCTAGCTTACGTTCACTTAAAGTTT
TAACTAACATCAATGGTTCCCTGTTTATCCTAGTAGAAAGGTCAAATTCT
TATCTCAAAATTCCCATTTTCAGTATCTGTCTATGTTGATTTAAGAGTGC
ACAGTGTTAAACCTTTTGAAATGCACTTTGCATCTGTATAGAAAATGAAA
GATTGCTGTCACACCCATTACTTCGTGAGCTTTCCAGTTTATGattcttg
aaaatgttttagATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAACT
ACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGTG
ACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATACG
CTGAAAAACCCTAATATAAAGGTACTTACTATATagatattttccttttt
tatgaGCAAAGGTCATGAAACTAGGCATATCTTATGAGCACTAGAATTAA
TCTCGTTTCGATAGCCTTGATTCACTTGATTATattttgataactgaaaa
ttaattcacgTAGGAATAGGAAAACAGCTCAGACCTACTTATCGAGGATA
TCTTGGTCGGATTATGATTCAAATCTATAGAGTTTTTGTCTACAATTAAG
TAATAAATAATCTTTTAATTATGTCTTCAAATTCTTCATGCAACAGAATT
CTGGCtggaaaacttttttcgctaCCCAATGCTTTTGATTTGAAACccaa
ttagaattttttttcgtaaAAAATGATATCAAACATGAGGAACTTATGCA
TCTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTATAATCCCAAAAGA
ATCcctaaatttgataccttcttactgatcaaaatatattttctctaTTT
AGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGTGTGGATTTCGAT
GTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTGGCTAGATACTCC
GAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAAACACACCGACTA
GAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTAAATGACCAAAGC
GTCTGTTttatatacacccctgtctcacaaccctaGTGAAACTTCTTCCC
ATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaattctattgttctt
agtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAGCAAATCAATTTT
ACAGTTGTCTGAAATTGTAGggaattttttcccaccggggacgaagtttt
gtccaaattttccgGTGGGGTTAGAGTGGGGGTgtcaccgggtctgtgac
acatgggTGTTGTTTACCGATCTCGATATCCTTTTCTGTTACTCGCAGTA
AATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAAACAAACACACAAA
GTGtgtgaatattttgaaagtaatCTATAAAACAGAAAGGTCTTGAACTC
CAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTCATTTTTATGAATG
AACTTATTATCAATGGACCCGTTTTCAGAAAACTATGAGCTTTGGAAAAT
ATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAGCTTAGAATATTGA
GTATTGTGAACACTTTCATTTATTTTTCCGAATTTTTCAAAGCCTTCCCA
GCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATGGAAGTCGTGACCT
GAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTCACTAGGGATGTTC
AGACGTAAAGTAAAGTACTCAAAAAATAAGcattgatttcaaatatataA
TTCTGTGACGCCAATTTCCATAACTTGAACACGCGCGGGGAACAAAGATT
TGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTTGACTGAAGGGACA
ATGAAACTTGgtcgagttaaggaaacatttgagttatagaggatcgagtt
aaagagactccgctGTGCTCATGGCCCCCGTCACCAGGGGAGCCAGGGGG
NTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTATAATCCCAAAAGAA
TCcctaaatttgataccttcttactgatcaaaatatattttctctaTTTA
GTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGTGTGGAATTCGATG
TAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTGGCTAGATACTCCG
AATCGGGGTCGATTTCGGGAAAACGGGATACTTATAAACACACCGACTAG
AAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTAAATGACCAAAGCG
TCTGTTttatatacacccctgtctcacaaccctaGTGAAACTTCTTCCCA
TGAAAAGTTCTATCGAAATCCCGATGGGGATaagaattctattgttctta
gtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAGCAAAGTCAATTTT
ACAGTTGTCTGAAATTGTAGggaattttttcccaccggggacgaagtttt
gtccaaattttccgGTGGGGTTAGAGTGGGGGGTgtcaccgggtctgtga
cacatgggTGTTGTTTACCGATCTCGATATCCTTTTCTGTTACTCGCAGT
AAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAAACAAACACACAA
AGTGtgtgaatattttgaaagtaatCTATAAAACAGAAAGGTCTTGAACT
CCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTCATTTTTATGAAT
GAACTTATTATCAATGGACCCGTTTTCAGAAAACTATGAGCTTTGGAAAA
TATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAGCTTAGAATATTG
AGTATTGTGAACACTTTCATTTATTTTTCCGAATTTTTCAAAGCCTTCCC
AGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATGGAAGTCGTGACC
TGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTCACTAGGGATGTT
CAGACGTAAAGTAAAGTACTCAAAAAATAAGcattgatttcaaatatata
ATTCTGTGACGCCAATTTCCATAACTTGAACACGCGCGGGGAACAAAGAT
TTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTTGACTGAAGGGAC
AATGAAACTTGgtcgagttaaggaaacatttgagttatagaggatcgagt
taaagagactccgctGTGCTCATGGCCCCCGTCACCAGGGGAGCCAGGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNcccccccccccaatattttgcaaagtatttttttttta
ctttagaaaatcttatatataccgtttagaggggtgaaataagggtaaaa
agtcgaaaattttcttcgtcgcccatccggtgggcgacatttttttttgg
ccccctcaattcgatttgcacgccgggggccatgcTATGAAAATTGGTtt
acatcaaaaaatttctgCACAAAACCTCTTTTTGTTGTAAAAAACTTAGT
TAATAATCGGTATCTTGACAAATTAATTCTGAAGACCAAATTATTTTAAA
GTCACAGTCTtgtcaaaatataattttgtgaTATTTCTTTTTATAGATTT
CATTTTTGTCATACCATGAGAAGTCAAATAACCAGAAAGTGGACTTTATG
GAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGCATTAAAATGTCCT
TTTGCAAACAATAGACAATGAAAGGCATTCAAATAGAATTTGAAGCCTAG
TGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTCccatttcaatttt
gtttgtgtttacctttaaaaggtaacatttttaaattgtttttgtttcat
ttagaaatattttaagactgtttttcgATATGAGTATTAAGTTTCTATGA
TATGATTGAAATGACATTTTAGTCCATTTATGACGTTGATGTTTGACAAA
GCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATGAGCCTGGAGAGGA
GGTTCTTCCAAATATGAAAAAAGATCACGTGATTATACGCCTGACTATAA
AATAAGATTTTATATGATAATATAATTATTAATTGGACATATTGTGCTTC
TTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGGGGatgtaccgggt
gcgccaaGAAAAAGTATACAAAGTGTACAGTATAGTAGGCCTGATTGGTG
CTAAAAAAGTTTCTTGGTTAAAATAGTGCAAATTTGGAAATCGAATAACT
CCCGCTCAGTACAGAAATCGGCCATTATCGTCTTCTATAGTCTCCTATAT
TATTCTTCGAAAGCTTTAATTGGTTTTGGCCTAAagtgagtttgaaattt
ccgaAAAAAGATTAGACTCTTGGGTTGTAGCCTGGTTTTCACGAAATGGG
TCAGGAAATAACGGCTATacccttttttggacctaccccggtggggtgga
ggtcctataaattaacccgtgttcgttagttagttagttagttaccaact
tttctcgagattggctcatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNcccccccccccaatattttgcaaagtattttttttttactt
tagaaaatcttatatataccgtttagaggggtgaaataagggtaaaaagt
cgaaaattttcttcgtcgcccatccggtgggcgacatttttttttggccc
cctcaattcgatttgcacgccgggggccatgcTATGAAAATTGGTttaca
tcaaaaaatttctgCACAAAACCTCTTTTTGTTGTAAAAAACTTAGTTAA
TAATCGGTATCTTGACAAATTAATTCTGAAGACCAAATTATTTTAAAGTC
ACAGTCTtgtcaaaatataattttgtgaTATTTCTTTTTATAGATTTCAT
TTTTGTCATACCATGAGAAGTCAAATAACCAGAAAGTGGACTTTATGGAG
AATGTAACAGTCAAATCTTTGTATAATGTCTGGCATTAAAATGTCCTTTT
GCAAACAATAGACAATGAAAGGCATTCAAATAGAATTTGAAGCCTAGTGA
GGATAGGCTTGACTTGGTTAATGGAAAATTATTCccatttcaattttgtt
tgtgtttacctttaaaaggtaacatttttaaattgtttttgtttcattta
gaaatattttaagactgtttttcgATATGAGTATTAAGTTTCTATGATAT
GATTGAAATGACATTTTAGTCCATTTATGACGTTGATGTTTGACAAAGCT
TTTCATGTGAAAGCTGTTTTAACTTGAAGCAATGAGCCTGGAGAGGAGGT
TCTTCCAAATATGAAAAAAGATCACGTGATTATACGCCTGACTATAAAAT
AAGATTTTATATGATAATATAATTATTAATTGGACATATTGTGCTTCTTG
GTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGGGGatgtaccgggtgcg
ccaaaaaaaagtatacaaagtGTACAGTATAGTAGGCCTGATTGGTGCTA
AAAGAAGTTTCTTGGTTAAAATAGTGCAAATTTGGAAATCGAATAACTCC
CGCTCAGTACAGAAATCGGCCATTATCGTCTGCTATATAATTCTTCGAAA
GCTTTAATTGGTTTTGGTCTAAagtgagtttgaaatttccgaaaaaaaat
tagacTCTTGGGTTGTAGCCTGGTTTTTACGAAATGGGTCAGGAAATAAC
GGCTATACCCTTTTTTACTTCTGACTCGAATTTAGAGCTTTGGGTTCcaa
attttcacgatttttatGTTACCAGTTGGGCTATTACTAGCTACtattag
cgttttatctaggaAATATAAGAAAGATTTTAGCCTTatgattttagttt
caattagCAAAGATGTGCCTACCCCCTGGTTTGGTACATGTGATTATTAT
AGCAAGTTGAACCAATTAGTGATAAGTGAGGCCTGTTGTACGAAAAATCC
TGTGgtctcaaatcaaatttttataatcAGCTTATaattaaaaacaagat
aaaacttaatccgaaaattgattttgccatGGATCAATGTGGAGTCagat
cacaaacaacaaaattttcattttttgaaaaaactaatattTCGCTTATC
AACAAAAGCATCGTCAGTGTGATAGTAATACTGAAAATGTTGAAcaaatt
tctagaaaaatcaACTAGCGGAACAAATTCAAGTCTCTAGAGTCCTTTTC
CAACGTTGTTTACGAGTTTAAATGTCCTGGATGCTCTTCCAAATACATGG
GAAAAAGTGATCGTACCCTATCTTGTTTTCTATACTGTTTGAAGAAGAGT
GTTTGAGCTGACATAAAAAGGTTTTTGTTTGACGTGGTGAGCGTACAAAC
atctattatttttttcatagaattaTTTTATGCTTTCTCAATTATTGAGA
CGACtttgtaaattttgtagtttatataggaagaaagaaatttgtaaaaa
actaGGCGTTATTTTATTGagaattcgaaaaataaaatttatatggTAGT
TATAAATCAATAGatagttttaaaatgttttacctATCCTGCAGCGAATC
TTTTATTTATAATgtcagccattttgaaaaatagtaaACTGGATGGCCAC
ATATCAGGATGAACTGTTTTTAACAATGATTGAAATTCAGATTTGAATAA
CTGAACTTCTGTTCACTGTGACAGGACGAATAAAGGTAGAGGAATTCGAT
CGATAACAATCATTTGATGAGAATCTAGAAACAGTATAGCGGATTATATA
TAGGGTGTCTGTCTAgtattgaaattaattttgcatCTGACACCACGTTT
GTGAACTCTGCTAGATCACTTGGCTTCAGTGTAACTAGCTAGCCTTTGGA
GGTTGTTGCTTCTGACCCGATTTTCACTGGTTGGCGTTTAAATTCGATAA
AAGAAGTTACGTGTTCGAAATCTATAATTCTCAACTATATTTCACATTCC
TTTTTagctatttcaaaagtaaaaaaagcaaaacaaaatgccAGCCATTT
TTGATAAAGCAGAAGATTGTCGCCCAGAATGGACCAATGCCAAAGCTGAA
TTCGATGATGTGGATGAGCATTTGGTTATCTGTGGAAAACCCGTCATGGA
AAGATGGGAAACCCCTTACATGCATGCATTAGCTGATATTGCTGCTAGCA
GAGGTTTGTTTTGAATCTGTCTATGTTTGAAACGCCTCAACAACCCATAG
AAATCAATTAAAGGGAATAAATTAGATTGAAGCGCTCACAGTCCATCTCT
TCCTCGTTCAAATGTTaatgataaaaatttgtttGTCCTCAGCCAAagat
acgtttttttataagaacaaattatataagaaaaaaggctttgatggcca
aaatatgtAAGAAAATGTTTACCACTGGCTAAACAGGGGTCTAAGACGAa
acatttgatttgatttgagttgAGTTGTTGTAAAACtcaaaatgaaatat
aaaaCATCTTTAACCTTACAATACTAGGTGGTCGTGTTCTCGAGCTTGGA
TTCGGAATGGCAATCTCCGGATCACGTATTGAAACGTACAAAGTGGACGA
GCACGTGATCGTTGAATGCAACGATGGAGTgttcgaaaaattgaaagtct
TTGCTAAAAATGCACCGAACAAAGTGACACCCTTGAAAGGTAAGATAAAT
GTTAAACTTATTTTTGTTAGTTATTGTCATTGTACTATAAGAAATTCCTG
AAAACTGAAGATTCAAAACAACTGACTCTTTTTTTCAACGAGAGATTTGC
TATGATGGTAAAGGTCCCCTGTCTAAACGTCAAACCACATTTTATGCAAG
ACACTTTGAGTTATGGAAAGTCTACTATGTTTTATCGATTTTAACTACCC
TACGATGGTATTACAAAATATACCATGCACCTAATTCGTTAAAAACCCAG
ATTTGNTACCCTACGATGGTATAAAAAATATACCATGACCTAATTCGTTA
AAAAACACAGATCTGAATTTTCAACGGCAAATCTTCATTGGCACGAAAAA
ATATcgttaatttaaaaaaaaaaatttaattttaaggattttggCAAGAT
GTTGTTCCCACTTTACCTGACGCAAGTTTTGACGCCATTTTGTATGACAC
TTTTCCCTTGTCGGACGACACGTGGCATACACATCAATTCGAATTCATCA
ATGGGCATGCGCAAAGGCTACTCAAACCAGGTGGTATTTTGACTTATTGC
AATCTAACATCATGGGGAGAAAATTTAAAAGGGCAATATGATGATATCGA
AAAAATGTTCCGAGAAACGCAAATTCCGAAATTGGAAGAAGCAGgattta
aaaaggaaaatatttcttggagGCTTTTGGATATTGTTCCAGAAAAAGAA
TGCAGATATTATCAATTTAACAAAATGTTGGCACCAACTTGTGTCAAAAA
ATAAACTGTATATGACCTCGTGTTAAAAGGGCACTAGCTTTGTTAATATT
GTTTGTCATTGATATCTACTCTACGTATTTTTCTTTATGTaactttgtat
atttttttttttcatttttgacagcaaagatattcttcatttttcttaat
ca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032799XLOC_032799Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051800-exon-scaffold_205-1491911889:24215..24507TCONS_00051800-exon-scaffold_205-1491911889:24215..24507Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:24215..24507TCONS_00051800-exon-scaffold_205-1510915933:24215..24507Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:24215..24507TCONS_00051800-exon-scaffold_205-1575043694:24215..24507Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:30956..31162TCONS_00051800-exon-scaffold_205-1491911889:30956..31162Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:30956..31162TCONS_00051800-exon-scaffold_205-1510915933:30956..31162Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:30956..31162TCONS_00051800-exon-scaffold_205-1575043694:30956..31162Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:31677..31835TCONS_00051800-exon-scaffold_205-1491911889:31677..31835Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:31677..31835TCONS_00051800-exon-scaffold_205-1510915933:31677..31835Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:31677..31835TCONS_00051800-exon-scaffold_205-1575043694:31677..31835Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:32317..32469TCONS_00051800-exon-scaffold_205-1491911889:32317..32469Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:32317..32469TCONS_00051800-exon-scaffold_205-1510915933:32317..32469Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:32317..32469TCONS_00051800-exon-scaffold_205-1575043694:32317..32469Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:37061..37285TCONS_00051800-exon-scaffold_205-1491911889:37061..37285Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:37061..37285TCONS_00051800-exon-scaffold_205-1510915933:37061..37285Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:37061..37285TCONS_00051800-exon-scaffold_205-1575043694:37061..37285Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:40622..40817TCONS_00051800-exon-scaffold_205-1491911889:40622..40817Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:40622..40817TCONS_00051800-exon-scaffold_205-1510915933:40622..40817Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:40622..40817TCONS_00051800-exon-scaffold_205-1575043694:40622..40817Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:41142..41303TCONS_00051800-exon-scaffold_205-1491911889:41142..41303Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:41142..41303TCONS_00051800-exon-scaffold_205-1510915933:41142..41303Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:41142..41303TCONS_00051800-exon-scaffold_205-1575043694:41142..41303Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1491911889:41701..42216TCONS_00051800-exon-scaffold_205-1491911889:41701..42216Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1510915933:41701..42216TCONS_00051800-exon-scaffold_205-1510915933:41701..42216Clytia hemisphaericaexon
TCONS_00051800-exon-scaffold_205-1575043694:41701..42216TCONS_00051800-exon-scaffold_205-1575043694:41701..42216Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_205supercontigscaffold_205:24215..42216 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.2425	34.9918	39.3521	33.158	18.9085	15.0977	19.7369	18.2708	15.1742	13.1566	12.8347	14.1156	10.7256	10.9308	10.3606	9.57619	27.2386	26.9024	16.6122	13.1992	24.1219	20.2093	19.787	20.8117	35.1808	29.3919	11.5463	18.4628	10.1112	7.78575
Blast
[Close]
BLAST of TCONS_00051800 vs. Swiss-Prot (Human)
Match: GAMT (Guanidinoacetate N-methyltransferase OS=Homo sapiens GN=GAMT PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 8.116e-97
Identity = 139/227 (61.23%), Postives = 171/227 (75.33%), Query Frame = 3 
Query: 1077 IFDKAEDCRPEWTNAKAEFDDVDEHLVICGKPVMERWETPYMHALADIAASRGGRVLELGFGMAISGSRIETYKVDEHVIVECNDGVFEKLKVFAKNAPNKVTPLKGFWQDVVPTLPDASFDAILYDTFPLSDDTWHTHQFEFINGHAQRLLKPGGILTYCNLTSWGENLKGQYDDIEKMFRETQIPKLEEAGFKKENISWRLLDIVPEKECRYYQFNKMLAPTCVK 1757
            IF   E+C P W  A A +D  D HL I GKPVMERWETPYMHALA  A+S+GGRVLE+GFGMAI+ S+++   +DEH I+ECNDGVF++L+ +A    +KV PLKG W+DV PTLPD  FD ILYDT+PLS++TWHTHQF FI  HA RLLKPGG+LTYCNLTSWGE +K +Y DI  MF ETQ+P L EAGF++ENI   ++ +VP  +CRYY F +M+ P   K
Sbjct:    9 IFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTK 235
The following BLAST results are available for this feature:
BLAST of TCONS_00051800 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAMT8.116e-9761.23Guanidinoacetate N-methyltransferase OS=Homo sapie... [more]
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