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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051800 ID=TCONS_00051800|Name=TCONS_00051800|organism=Clytia hemisphaerica|type=transcript|length=1911bp AGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGAAATCGAGGCTTTC GTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAAACACTACATTGTA TCTTTCAATGATGGTGTACTTATCACAGATTGTCCAATCTCTCTGCATCA AATATGAAAGTGAGCATTACAGGAGACTTCAAGACACCTTGATTGATGGT AAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGAATGATATCTGGCC AGGCCCTTCATGGTCATCTCTTGAATATAATGGACAATGGAAGATTTTGC ATTATGACGTTGAGAAATTCTTTGCACCAACCTCACTGAGTGCTTACCGT AACAAGGATTCCATTGTTGTCAACATTGTGCGAGATCATatttcaaatga gaaaaaactgCTGTGCAATATCTCATTTCACGATTGGAAAGAATTTGGTA TTTTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCAATCAGCATTCT ATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAACTACCTGAATCTTC TTACATGACTGCTCAATTGATGGACTTTGAAACTGGTGACGTCGTATCCA GTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATACGCTGAAAAACCCT AATATAAAGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGTGTGGA TTTCGATGTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTGGCTAG ATACTCCGAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAAACACA CCGACTAGAAGGATTTCATTTTTGTCATACCATGAGAAGTCAAATAACCA GAAAGTGGACTTTATGGAGAATGTAACAGTCAAATCTTTGTATAATGTCT GGCATTAAAATGTCCTTTTGCAAACAATAGACAATGAAAGGCATTCAAAT AGAATTTGAAGCCTAGTGAGGATAGGCTTGACTTGGTTAATGGAAAATTA TTCccatttcaattttgtttgtgtttacctttaaaagctatttcaaaagt aaaaaaagcaaaacaaaatgccAGCCATTTTTGATAAAGCAGAAGATTGT CGCCCAGAATGGACCAATGCCAAAGCTGAATTCGATGATGTGGATGAGCA TTTGGTTATCTGTGGAAAACCCGTCATGGAAAGATGGGAAACCCCTTACA TGCATGCATTAGCTGATATTGCTGCTAGCAGAGGTGGTCGTGTTCTCGAG CTTGGATTCGGAATGGCAATCTCCGGATCACGTATTGAAACGTACAAAGT GGACGAGCACGTGATCGTTGAATGCAACGATGGAGTgttcgaaaaattga aagtctTTGCTAAAAATGCACCGAACAAAGTGACACCCTTGAAAGgattt tggCAAGATGTTGTTCCCACTTTACCTGACGCAAGTTTTGACGCCATTTT GTATGACACTTTTCCCTTGTCGGACGACACGTGGCATACACATCAATTCG AATTCATCAATGGGCATGCGCAAAGGCTACTCAAACCAGGTGGTATTTTG ACTTATTGCAATCTAACATCATGGGGAGAAAATTTAAAAGGGCAATATGA TGATATCGAAAAAATGTTCCGAGAAACGCAAATTCCGAAATTGGAAGAAG CAGgatttaaaaaggaaaatatttcttggagGCTTTTGGATATTGTTCCA GAAAAAGAATGCAGATATTATCAATTTAACAAAATGTTGGCACCAACTTG TGTCAAAAAATAAACTGTATATGACCTCGTGTTAAAAGGGCACTAGCTTT GTTAATATTGTTTGTCATTGATATCTACTCTACGTATTTTTCTTTATGTa actttgtatatttttttttttcatttttgacagcaaagatattcttcatt tttcttaatca Run BLAST on NCBI transcript from alignment at scaffold_205:24215..42216+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051800 ID=TCONS_00051800|Name=TCONS_00051800|organism=Clytia hemisphaerica|type=transcript|length=18002bp|location=Sequence derived from alignment at scaffold_205:24215..42216+ (Clytia hemisphaerica) AGAGCTACTGTTATTCTTCCTTTCCAGGAAACATGGAAATCGAGGCTTTC
GTTCGCCAGCATTTCGAATTACCGCGATCCAGTAAAAACACTACATTGTA
TCTTTCAATGATGGTGTACTTATCACAGATTGTCCAATCTCTCTGCATCA
AATATGAAAGTGAGCATTACAGGAGACTTCAAGACACCTTGATTGATGGT
AAAGGGCATACAATGGGAGCTTTGTATTGGCAATTGAATGATATCTGGCC
AGGCCCTTCATGGTCATCTCTTGAATATAATGGACAATGGAAGGTAATAT
TATATCAAAACTTCTatagttgatgctctctaattcgattggATTGGATT
TTAATCCaataagggagcgtattgaATAATAGATTTTTATGTCGTCTGTG
ACTTTTAATATTATCGAGTAATGGAGCgcatcgaatagtagaaagtcgaa
taagagagcatcaactatatttttttttatttcatttataaccgtattac
ttcaaataatgcccccttcttttaaacgcccctcaaataaacgccctctT
TGAATAAACGCCTCCCCACTAGGAAGGGCGTTTACTTCAATGGGATTAAT
TtcgtggggattaaatttcgcggtttagcTCATCTGCGAAATTTNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttatttggcacctaagagt
aatgtagcatctttaatggtaaatctTTTTGGTTTGTCGTTatacttctc
agtgcgttttagacattaatgatatgcccttgataatacacttgcattat
aaaatcattgtaaaggagagatcaacaataagaaatttaaacaagcacaa
aatggctgggctgaaagaactcaaaaattaataaagtgcctcgaaatgcc
ttcactACATTTCagtgaatttttttagaaatcaatgaaaaagtacatca
agataatactgtgaaaatttaaagccagcaccaaaatttatcattcaaac
tgacaggaaagttgtgagagtaagtaagtatttatttatcatttaacact
acaaaaaagatacaagtgatgatatgcacaaaaaatatatgaagggagac
cgccttatagtctagctaatcaaaaagatgcggccacctaagtACAGATT
Gcgtttataacacttcatgaattatttataaatatttatatatcttgaat
atagttcttataattttaaatctggcgaaaaactattgtttccacaaaat
acccctagaatatgtccaaaattacttcaagtgttctattgggtacagat
taagatatctagcaatgagaaaactttttttgaaggaaaataataAACTG
ACAATCTTGATGCTCTGATAAAGGtcggagacagagatagaacagcaatt
aactgaaaagacaatgcggtacatattccagccgcggttTTTTTATATAC
TATGGTTTCTCTTCAATGTCTTCTTTCCTAGTACACAATTATTCTTTTCA
ATGATTTCATTTGGCCTTCTTGATAGACCGTTAAAAAATTTCTTCGTATG
CAAACTACGGATGTGGCAAATCATTCCTTCTACAAGAATGCAAGTTGATG
TATTCGTTCTTTTTATAAAGTTTGACAGAGAATAATTACTTGTGGTTTTG
CTCTTTTGCTCCCTTTTAACCGTTCAGAATTCCCTTTTGACAAATTTGAT
GCAATGATTgatgttatctttttttctctttcattgCATCCTGTGTGAGA
TGtaatcataatttttttgaattagcCCGATATATGCTATTTTATATGAA
TGGACTCGAATGACATACTggccaaaatataaaaaatataccgTCAACTT
ATTTGTAataaatggctgtaacttttgatagaattcgaatcaagttgcgg
ttGTGTGCTCGTTAAatagatattcgtgagtggaatattatcaagtaaaa
aaattgagatttagggcattttccaaacatttttatATGTACTTAATGGT
CAATGGTTCTTCGTCGTTGCTCAAGATTTTCAGAAACACACCATATATTT
ACATATACACgaacgtccaaagttttgaagcgttcggatgttcttaacat
tttgagttttaagcctaaaaatgttcttagcatgttcttattttcgtcat
ttttgataactttgtcCATTTGCCTataaaattgggtgttttacaGTCCG
CGAAGCCTAacattcttaacttgttcctaacattttggtcatcgaagcct
tatgtatgttcttatatagttttagAAAGTTTTAGTCAAGTAGATCAGCT
AATTTGACATTGAATTATGTCACTAATATGTGAAAATAGTCAATATAGGA
GATTTTTGTCctgaaaaagaaacattttcaatCCATTCGGCTCTTTCCTC
TGTGAAAACTTACCTTTATGCCTAATCATGATATTTGTAGAAATTGTTCG
CAGTGTTCTTTATCGGCaagtatttttctttctgtttacaGATTTTGCAT
TATGACGTTGAGAAATTCTTTGCACCAACCTCACTGAGTGCTTACCGTAA
CAAGGATTCCATTGTTGTCAACATTGTGCGAGATCATatttcaaatgaga
aaaaactgCTGTGCAATATCTCATTTCACGATTGGAAAGAATTTGGTATT
TTGTGGAACAAGACCTGGTTGTTAGATTTGTCATCCAATCAGCATTCTGT
AATCTATCGTTACTTTTATTTGTTTCTTGATTTATAGGGGAATACAAGCA
TTGCTACGGATGAGAAACAGCTGAGGGCTAAAAAGGAATCTTAAGATACC
TTGGATTTCGGCTTATAGATTTAATCTAGAGCCTTTTTTATTTATGTACA
CATTTTCAAGAGGATAGGACCTTCGCCTCTAGCCTATGGCTATATCTCAC
CGATTATTACAATATATTTCGGTCGATTTTATCTTATCTCAGATGGTAAA
TCTTGAGAAGTGATAAACTTCATTCCCTAGCTTACGTTCACTTAAAGTTT
TAACTAACATCAATGGTTCCCTGTTTATCCTAGTAGAAAGGTCAAATTCT
TATCTCAAAATTCCCATTTTCAGTATCTGTCTATGTTGATTTAAGAGTGC
ACAGTGTTAAACCTTTTGAAATGCACTTTGCATCTGTATAGAAAATGAAA
GATTGCTGTCACACCCATTACTTCGTGAGCTTTCCAGTTTATGattcttg
aaaatgttttagATTGAGATCTTTCAAAAGAGCATAACCGAGTTGCAACT
ACCTGAATCTTCTTACATGACTGCTCAATTGATGGACTTTGAAACTGGTG
ACGTCGTATCCAGTACTGAATTGTTTCTGTCAAACTTCTCTGGTGATACG
CTGAAAAACCCTAATATAAAGGTACTTACTATATagatattttccttttt
tatgaGCAAAGGTCATGAAACTAGGCATATCTTATGAGCACTAGAATTAA
TCTCGTTTCGATAGCCTTGATTCACTTGATTATattttgataactgaaaa
ttaattcacgTAGGAATAGGAAAACAGCTCAGACCTACTTATCGAGGATA
TCTTGGTCGGATTATGATTCAAATCTATAGAGTTTTTGTCTACAATTAAG
TAATAAATAATCTTTTAATTATGTCTTCAAATTCTTCATGCAACAGAATT
CTGGCtggaaaacttttttcgctaCCCAATGCTTTTGATTTGAAACccaa
ttagaattttttttcgtaaAAAATGATATCAAACATGAGGAACTTATGCA
TCTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTATAATCCCAAAAGA
ATCcctaaatttgataccttcttactgatcaaaatatattttctctaTTT
AGTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGTGTGGATTTCGAT
GTAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTGGCTAGATACTCC
GAATCGGGGTCGATTTCGGGAAAACGGGATACTTATAAACACACCGACTA
GAAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTAAATGACCAAAGC
GTCTGTTttatatacacccctgtctcacaaccctaGTGAAACTTCTTCCC
ATGAAAAGTTCTATCGAAATCCCGATGGGGATaagaattctattgttctt
agtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAGCAAATCAATTTT
ACAGTTGTCTGAAATTGTAGggaattttttcccaccggggacgaagtttt
gtccaaattttccgGTGGGGTTAGAGTGGGGGTgtcaccgggtctgtgac
acatgggTGTTGTTTACCGATCTCGATATCCTTTTCTGTTACTCGCAGTA
AATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAAACAAACACACAAA
GTGtgtgaatattttgaaagtaatCTATAAAACAGAAAGGTCTTGAACTC
CAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTCATTTTTATGAATG
AACTTATTATCAATGGACCCGTTTTCAGAAAACTATGAGCTTTGGAAAAT
ATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAGCTTAGAATATTGA
GTATTGTGAACACTTTCATTTATTTTTCCGAATTTTTCAAAGCCTTCCCA
GCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATGGAAGTCGTGACCT
GAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTCACTAGGGATGTTC
AGACGTAAAGTAAAGTACTCAAAAAATAAGcattgatttcaaatatataA
TTCTGTGACGCCAATTTCCATAACTTGAACACGCGCGGGGAACAAAGATT
TGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTTGACTGAAGGGACA
ATGAAACTTGgtcgagttaaggaaacatttgagttatagaggatcgagtt
aaagagactccgctGTGCTCATGGCCCCCGTCACCAGGGGAGCCAGGGGG
NTAACTTTCTTCTAGAGAATGTGATTTGACGAGGTATAATCCCAAAAGAA
TCcctaaatttgataccttcttactgatcaaaatatattttctctaTTTA
GTGGAGAATTGACAGAACTCAGCGTAAAGAAAATGGTGTGGAATTCGATG
TAATTTTATCCTTGGACGCTCCTTCTGCATTCGTTTGGCTAGATACTCCG
AATCGGGGTCGATTTCGGGAAAACGGGATACTTATAAACACACCGACTAG
AAGGGTAAGCTGCTTACTTAACTTCTTTTGTTAGTTAAATGACCAAAGCG
TCTGTTttatatacacccctgtctcacaaccctaGTGAAACTTCTTCCCA
TGAAAAGTTCTATCGAAATCCCGATGGGGATaagaattctattgttctta
gtTCAAAAACTCCAGTGTATTTTAAATACGGACGAAGCAAAGTCAATTTT
ACAGTTGTCTGAAATTGTAGggaattttttcccaccggggacgaagtttt
gtccaaattttccgGTGGGGTTAGAGTGGGGGGTgtcaccgggtctgtga
cacatgggTGTTGTTTACCGATCTCGATATCCTTTTCTGTTACTCGCAGT
AAATCAGTGAGAAGTTCAATGTAAAGTTTGTTGAGAAAACAAACACACAA
AGTGtgtgaatattttgaaagtaatCTATAAAACAGAAAGGTCTTGAACT
CCAGTTGATTTCAAAAACAGATATATTTTGGTTGTGTCATTTTTATGAAT
GAACTTATTATCAATGGACCCGTTTTCAGAAAACTATGAGCTTTGGAAAA
TATCTGTTTCTTTTTGCCACGCCTAGACTTTCCATAAGCTTAGAATATTG
AGTATTGTGAACACTTTCATTTATTTTTCCGAATTTTTCAAAGCCTTCCC
AGCTTCTTGAGAGGAGCTGAAGTATGTTGAAGAAAATGGAAGTCGTGACC
TGAGAGACAAACCTCTAAAATGAGGAGGTTCTGTGGTCACTAGGGATGTT
CAGACGTAAAGTAAAGTACTCAAAAAATAAGcattgatttcaaatatata
ATTCTGTGACGCCAATTTCCATAACTTGAACACGCGCGGGGAACAAAGAT
TTGCTCGGGTTATGGAGTAAGATCTATAAGACATTGTTGACTGAAGGGAC
AATGAAACTTGgtcgagttaaggaaacatttgagttatagaggatcgagt
taaagagactccgctGTGCTCATGGCCCCCGTCACCAGGGGAGCCAGGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNcccccccccccaatattttgcaaagtatttttttttta
ctttagaaaatcttatatataccgtttagaggggtgaaataagggtaaaa
agtcgaaaattttcttcgtcgcccatccggtgggcgacatttttttttgg
ccccctcaattcgatttgcacgccgggggccatgcTATGAAAATTGGTtt
acatcaaaaaatttctgCACAAAACCTCTTTTTGTTGTAAAAAACTTAGT
TAATAATCGGTATCTTGACAAATTAATTCTGAAGACCAAATTATTTTAAA
GTCACAGTCTtgtcaaaatataattttgtgaTATTTCTTTTTATAGATTT
CATTTTTGTCATACCATGAGAAGTCAAATAACCAGAAAGTGGACTTTATG
GAGAATGTAACAGTCAAATCTTTGTATAATGTCTGGCATTAAAATGTCCT
TTTGCAAACAATAGACAATGAAAGGCATTCAAATAGAATTTGAAGCCTAG
TGAGGATAGGCTTGACTTGGTTAATGGAAAATTATTCccatttcaatttt
gtttgtgtttacctttaaaaggtaacatttttaaattgtttttgtttcat
ttagaaatattttaagactgtttttcgATATGAGTATTAAGTTTCTATGA
TATGATTGAAATGACATTTTAGTCCATTTATGACGTTGATGTTTGACAAA
GCTTTTCATGTGAAAGCTGTTTTAACTTGAAGCAATGAGCCTGGAGAGGA
GGTTCTTCCAAATATGAAAAAAGATCACGTGATTATACGCCTGACTATAA
AATAAGATTTTATATGATAATATAATTATTAATTGGACATATTGTGCTTC
TTGGTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGGGGatgtaccgggt
gcgccaaGAAAAAGTATACAAAGTGTACAGTATAGTAGGCCTGATTGGTG
CTAAAAAAGTTTCTTGGTTAAAATAGTGCAAATTTGGAAATCGAATAACT
CCCGCTCAGTACAGAAATCGGCCATTATCGTCTTCTATAGTCTCCTATAT
TATTCTTCGAAAGCTTTAATTGGTTTTGGCCTAAagtgagtttgaaattt
ccgaAAAAAGATTAGACTCTTGGGTTGTAGCCTGGTTTTCACGAAATGGG
TCAGGAAATAACGGCTATacccttttttggacctaccccggtggggtgga
ggtcctataaattaacccgtgttcgttagttagttagttagttaccaact
tttctcgagattggctcatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNcccccccccccaatattttgcaaagtattttttttttactt
tagaaaatcttatatataccgtttagaggggtgaaataagggtaaaaagt
cgaaaattttcttcgtcgcccatccggtgggcgacatttttttttggccc
cctcaattcgatttgcacgccgggggccatgcTATGAAAATTGGTttaca
tcaaaaaatttctgCACAAAACCTCTTTTTGTTGTAAAAAACTTAGTTAA
TAATCGGTATCTTGACAAATTAATTCTGAAGACCAAATTATTTTAAAGTC
ACAGTCTtgtcaaaatataattttgtgaTATTTCTTTTTATAGATTTCAT
TTTTGTCATACCATGAGAAGTCAAATAACCAGAAAGTGGACTTTATGGAG
AATGTAACAGTCAAATCTTTGTATAATGTCTGGCATTAAAATGTCCTTTT
GCAAACAATAGACAATGAAAGGCATTCAAATAGAATTTGAAGCCTAGTGA
GGATAGGCTTGACTTGGTTAATGGAAAATTATTCccatttcaattttgtt
tgtgtttacctttaaaaggtaacatttttaaattgtttttgtttcattta
gaaatattttaagactgtttttcgATATGAGTATTAAGTTTCTATGATAT
GATTGAAATGACATTTTAGTCCATTTATGACGTTGATGTTTGACAAAGCT
TTTCATGTGAAAGCTGTTTTAACTTGAAGCAATGAGCCTGGAGAGGAGGT
TCTTCCAAATATGAAAAAAGATCACGTGATTATACGCCTGACTATAAAAT
AAGATTTTATATGATAATATAATTATTAATTGGACATATTGTGCTTCTTG
GTAGTCTTGTGCGGTTTTGTTGAGTACTCCAAGGGGatgtaccgggtgcg
ccaaaaaaaagtatacaaagtGTACAGTATAGTAGGCCTGATTGGTGCTA
AAAGAAGTTTCTTGGTTAAAATAGTGCAAATTTGGAAATCGAATAACTCC
CGCTCAGTACAGAAATCGGCCATTATCGTCTGCTATATAATTCTTCGAAA
GCTTTAATTGGTTTTGGTCTAAagtgagtttgaaatttccgaaaaaaaat
tagacTCTTGGGTTGTAGCCTGGTTTTTACGAAATGGGTCAGGAAATAAC
GGCTATACCCTTTTTTACTTCTGACTCGAATTTAGAGCTTTGGGTTCcaa
attttcacgatttttatGTTACCAGTTGGGCTATTACTAGCTACtattag
cgttttatctaggaAATATAAGAAAGATTTTAGCCTTatgattttagttt
caattagCAAAGATGTGCCTACCCCCTGGTTTGGTACATGTGATTATTAT
AGCAAGTTGAACCAATTAGTGATAAGTGAGGCCTGTTGTACGAAAAATCC
TGTGgtctcaaatcaaatttttataatcAGCTTATaattaaaaacaagat
aaaacttaatccgaaaattgattttgccatGGATCAATGTGGAGTCagat
cacaaacaacaaaattttcattttttgaaaaaactaatattTCGCTTATC
AACAAAAGCATCGTCAGTGTGATAGTAATACTGAAAATGTTGAAcaaatt
tctagaaaaatcaACTAGCGGAACAAATTCAAGTCTCTAGAGTCCTTTTC
CAACGTTGTTTACGAGTTTAAATGTCCTGGATGCTCTTCCAAATACATGG
GAAAAAGTGATCGTACCCTATCTTGTTTTCTATACTGTTTGAAGAAGAGT
GTTTGAGCTGACATAAAAAGGTTTTTGTTTGACGTGGTGAGCGTACAAAC
atctattatttttttcatagaattaTTTTATGCTTTCTCAATTATTGAGA
CGACtttgtaaattttgtagtttatataggaagaaagaaatttgtaaaaa
actaGGCGTTATTTTATTGagaattcgaaaaataaaatttatatggTAGT
TATAAATCAATAGatagttttaaaatgttttacctATCCTGCAGCGAATC
TTTTATTTATAATgtcagccattttgaaaaatagtaaACTGGATGGCCAC
ATATCAGGATGAACTGTTTTTAACAATGATTGAAATTCAGATTTGAATAA
CTGAACTTCTGTTCACTGTGACAGGACGAATAAAGGTAGAGGAATTCGAT
CGATAACAATCATTTGATGAGAATCTAGAAACAGTATAGCGGATTATATA
TAGGGTGTCTGTCTAgtattgaaattaattttgcatCTGACACCACGTTT
GTGAACTCTGCTAGATCACTTGGCTTCAGTGTAACTAGCTAGCCTTTGGA
GGTTGTTGCTTCTGACCCGATTTTCACTGGTTGGCGTTTAAATTCGATAA
AAGAAGTTACGTGTTCGAAATCTATAATTCTCAACTATATTTCACATTCC
TTTTTagctatttcaaaagtaaaaaaagcaaaacaaaatgccAGCCATTT
TTGATAAAGCAGAAGATTGTCGCCCAGAATGGACCAATGCCAAAGCTGAA
TTCGATGATGTGGATGAGCATTTGGTTATCTGTGGAAAACCCGTCATGGA
AAGATGGGAAACCCCTTACATGCATGCATTAGCTGATATTGCTGCTAGCA
GAGGTTTGTTTTGAATCTGTCTATGTTTGAAACGCCTCAACAACCCATAG
AAATCAATTAAAGGGAATAAATTAGATTGAAGCGCTCACAGTCCATCTCT
TCCTCGTTCAAATGTTaatgataaaaatttgtttGTCCTCAGCCAAagat
acgtttttttataagaacaaattatataagaaaaaaggctttgatggcca
aaatatgtAAGAAAATGTTTACCACTGGCTAAACAGGGGTCTAAGACGAa
acatttgatttgatttgagttgAGTTGTTGTAAAACtcaaaatgaaatat
aaaaCATCTTTAACCTTACAATACTAGGTGGTCGTGTTCTCGAGCTTGGA
TTCGGAATGGCAATCTCCGGATCACGTATTGAAACGTACAAAGTGGACGA
GCACGTGATCGTTGAATGCAACGATGGAGTgttcgaaaaattgaaagtct
TTGCTAAAAATGCACCGAACAAAGTGACACCCTTGAAAGGTAAGATAAAT
GTTAAACTTATTTTTGTTAGTTATTGTCATTGTACTATAAGAAATTCCTG
AAAACTGAAGATTCAAAACAACTGACTCTTTTTTTCAACGAGAGATTTGC
TATGATGGTAAAGGTCCCCTGTCTAAACGTCAAACCACATTTTATGCAAG
ACACTTTGAGTTATGGAAAGTCTACTATGTTTTATCGATTTTAACTACCC
TACGATGGTATTACAAAATATACCATGCACCTAATTCGTTAAAAACCCAG
ATTTGNTACCCTACGATGGTATAAAAAATATACCATGACCTAATTCGTTA
AAAAACACAGATCTGAATTTTCAACGGCAAATCTTCATTGGCACGAAAAA
ATATcgttaatttaaaaaaaaaaatttaattttaaggattttggCAAGAT
GTTGTTCCCACTTTACCTGACGCAAGTTTTGACGCCATTTTGTATGACAC
TTTTCCCTTGTCGGACGACACGTGGCATACACATCAATTCGAATTCATCA
ATGGGCATGCGCAAAGGCTACTCAAACCAGGTGGTATTTTGACTTATTGC
AATCTAACATCATGGGGAGAAAATTTAAAAGGGCAATATGATGATATCGA
AAAAATGTTCCGAGAAACGCAAATTCCGAAATTGGAAGAAGCAGgattta
aaaaggaaaatatttcttggagGCTTTTGGATATTGTTCCAGAAAAAGAA
TGCAGATATTATCAATTTAACAAAATGTTGGCACCAACTTGTGTCAAAAA
ATAAACTGTATATGACCTCGTGTTAAAAGGGCACTAGCTTTGTTAATATT
GTTTGTCATTGATATCTACTCTACGTATTTTTCTTTATGTaactttgtat
atttttttttttcatttttgacagcaaagatattcttcatttttcttaat
ca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00051800-exon-scaffold_205-1491911889:24215..24507 | TCONS_00051800-exon-scaffold_205-1491911889:24215..24507 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:24215..24507 | TCONS_00051800-exon-scaffold_205-1510915933:24215..24507 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:24215..24507 | TCONS_00051800-exon-scaffold_205-1575043694:24215..24507 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:30956..31162 | TCONS_00051800-exon-scaffold_205-1491911889:30956..31162 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:30956..31162 | TCONS_00051800-exon-scaffold_205-1510915933:30956..31162 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:30956..31162 | TCONS_00051800-exon-scaffold_205-1575043694:30956..31162 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:31677..31835 | TCONS_00051800-exon-scaffold_205-1491911889:31677..31835 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:31677..31835 | TCONS_00051800-exon-scaffold_205-1510915933:31677..31835 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:31677..31835 | TCONS_00051800-exon-scaffold_205-1575043694:31677..31835 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:32317..32469 | TCONS_00051800-exon-scaffold_205-1491911889:32317..32469 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:32317..32469 | TCONS_00051800-exon-scaffold_205-1510915933:32317..32469 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:32317..32469 | TCONS_00051800-exon-scaffold_205-1575043694:32317..32469 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:37061..37285 | TCONS_00051800-exon-scaffold_205-1491911889:37061..37285 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:37061..37285 | TCONS_00051800-exon-scaffold_205-1510915933:37061..37285 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:37061..37285 | TCONS_00051800-exon-scaffold_205-1575043694:37061..37285 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:40622..40817 | TCONS_00051800-exon-scaffold_205-1491911889:40622..40817 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:40622..40817 | TCONS_00051800-exon-scaffold_205-1510915933:40622..40817 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:40622..40817 | TCONS_00051800-exon-scaffold_205-1575043694:40622..40817 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:41142..41303 | TCONS_00051800-exon-scaffold_205-1491911889:41142..41303 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:41142..41303 | TCONS_00051800-exon-scaffold_205-1510915933:41142..41303 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:41142..41303 | TCONS_00051800-exon-scaffold_205-1575043694:41142..41303 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1491911889:41701..42216 | TCONS_00051800-exon-scaffold_205-1491911889:41701..42216 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1510915933:41701..42216 | TCONS_00051800-exon-scaffold_205-1510915933:41701..42216 | Clytia hemisphaerica | exon |
TCONS_00051800-exon-scaffold_205-1575043694:41701..42216 | TCONS_00051800-exon-scaffold_205-1575043694:41701..42216 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_205 | supercontig | scaffold_205:24215..42216 + |
Blast
BLAST of TCONS_00051800 vs. Swiss-Prot (Human)
Match: GAMT (Guanidinoacetate N-methyltransferase OS=Homo sapiens GN=GAMT PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.116e-97 Identity = 139/227 (61.23%), Postives = 171/227 (75.33%), Query Frame = 3
Query: 1077 IFDKAEDCRPEWTNAKAEFDDVDEHLVICGKPVMERWETPYMHALADIAASRGGRVLELGFGMAISGSRIETYKVDEHVIVECNDGVFEKLKVFAKNAPNKVTPLKGFWQDVVPTLPDASFDAILYDTFPLSDDTWHTHQFEFINGHAQRLLKPGGILTYCNLTSWGENLKGQYDDIEKMFRETQIPKLEEAGFKKENISWRLLDIVPEKECRYYQFNKMLAPTCVK 1757
IF E+C P W A A +D D HL I GKPVMERWETPYMHALA A+S+GGRVLE+GFGMAI+ S+++ +DEH I+ECNDGVF++L+ +A +KV PLKG W+DV PTLPD FD ILYDT+PLS++TWHTHQF FI HA RLLKPGG+LTYCNLTSWGE +K +Y DI MF ETQ+P L EAGF++ENI ++ +VP +CRYY F +M+ P K
Sbjct: 9 IFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTK 235
The following BLAST results are available for this feature:
|