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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051796 ID=TCONS_00051796|Name=TCONS_00051796|organism=Clytia hemisphaerica|type=transcript|length=2123bpRun BLAST on NCBI protein sequence of TCONS_00051796-protein >TCONS_00051796-protein ID=TCONS_00051796-protein|Name=TCONS_00051796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=372bp PLHVKYLDVPHGAHVDKKCRRKLESLLSPDGFIYEKAIRDLDPSIVYGEDRun BLAST on NCBI transcript from alignment at scaffold_205:22389..42216+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00051796 ID=TCONS_00051796|Name=TCONS_00051796|organism=Clytia hemisphaerica|type=transcript|length=19828bp|location=Sequence derived from alignment at scaffold_205:22389..42216+ (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_205:22389..42216+ >TCONS_00051796 ID=TCONS_00051796|Name=TCONS_00051796|organism=Clytia hemisphaerica|type=CDS|length=6714bp|location=Sequence derived from alignment at scaffold_205:22389..42216+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
No biomaterial libraries express this feature.
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00051796 vs. Swiss-Prot (Human)
Match: GAMT (Guanidinoacetate N-methyltransferase OS=Homo sapiens GN=GAMT PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 4.434e-96 Identity = 139/227 (61.23%), Postives = 171/227 (75.33%), Query Frame = 2
Query: 1289 IFDKAEDCRPEWTNAKAEFDDVDEHLVICGKPVMERWETPYMHALADIAASRGGRVLELGFGMAISGSRIETYKVDEHVIVECNDGVFEKLKVFAKNAPNKVTPLKGFWQDVVPTLPDASFDAILYDTFPLSDDTWHTHQFEFINGHAQRLLKPGGILTYCNLTSWGENLKGQYDDIEKMFRETQIPKLEEAGFKKENISWRLLDIVPEKECRYYQFNKMLAPTCVK 1969
IF E+C P W A A +D D HL I GKPVMERWETPYMHALA A+S+GGRVLE+GFGMAI+ S+++ +DEH I+ECNDGVF++L+ +A +KV PLKG W+DV PTLPD FD ILYDT+PLS++TWHTHQF FI HA RLLKPGG+LTYCNLTSWGE +K +Y DI MF ETQ+P L EAGF++ENI ++ +VP +CRYY F +M+ P K
Sbjct: 9 IFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTK 235 The following BLAST results are available for this feature:
BLAST of TCONS_00051796 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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