TCONS_00051779 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051779
Unique NameTCONS_00051779
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051779 ID=TCONS_00051779|Name=TCONS_00051779|organism=Clytia hemisphaerica|type=transcript|length=174bp
TAAATCCATTCGATCCAATGAACAAACTCTCGTTACTGAAACCCCCGATC
CAATCTTGACAACAACCATCCTAGAGACACTCAACGTGATGAAGAATTAC
ATCAAGGATGCTACCAAATCCAAACGTCATTTTCAAATGGTACAAGCAAA
GCAGGAAAGTGATGCTGTTGACCG
Run BLAST on NCBI

transcript from alignment at scaffold_204:112590..112763

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051779 ID=TCONS_00051779|Name=TCONS_00051779|organism=Clytia hemisphaerica|type=transcript|length=174bp|location=Sequence derived from alignment at scaffold_204:112590..112763 (Clytia hemisphaerica)
CGGTCAACAGCATCACTTTCCTGCTTTGCTTGTACCATTTGAAAATGACG
TTTGGATTTGGTAGCATCCTTGATGTAATTCTTCATCACGTTGAGTGTCT
CTAGGATGGTTGTTGTCAAGATTGGATCGGGGGTTTCAGTAACGAGAGTT
TGTTCATTGGATCGAATGGATTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032787XLOC_032787Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051779-exon-scaffold_204-1491911889:112590..112763TCONS_00051779-exon-scaffold_204-1491911889:112590..112763Clytia hemisphaericaexon
TCONS_00051779-exon-scaffold_204-1510915933:112590..112763TCONS_00051779-exon-scaffold_204-1510915933:112590..112763Clytia hemisphaericaexon
TCONS_00051779-exon-scaffold_204-1575043694:112590..112763TCONS_00051779-exon-scaffold_204-1575043694:112590..112763Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_204supercontigscaffold_204:112590..112763 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051779 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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