TCONS_00051755 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051755
Unique NameTCONS_00051755
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051755 ID=TCONS_00051755|Name=TCONS_00051755|organism=Clytia hemisphaerica|type=transcript|length=309bp
TTTTGGCCAGCAACTCCCTCTAATGTTCATCTATCAACCCTCTTAATGga
aaaaagataaagaaagttTATGAGCTATCGATATATACATCAAAGTTTCT
TGGAAAGTAAGTATTTCATCTCGTGGAATAGAAGCTCAAAAAGAACAAGT
AGTCAGTCATCTTATTATTTAGAGGTGGTAATTGGTAACAATCGTTCATA
TTCCTGTCGTTTTAAATCTTTGACCATTTGGAAGGTTTTTACAACTAATG
GATAAGCTGGTATATTCCATTTCCCTGATCCGTGCCCGGTCGGTCCAGAC
ATGATTTTA
Run BLAST on NCBI

transcript from alignment at scaffold_204:23899..24680-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051755 ID=TCONS_00051755|Name=TCONS_00051755|organism=Clytia hemisphaerica|type=transcript|length=782bp|location=Sequence derived from alignment at scaffold_204:23899..24680- (Clytia hemisphaerica)
TTTTGGCCAGCAACTCCCTCTAATGTTCATCTATCAACCCTCTTAATGGT
TTAAACTTATGACTTTTAGTTTTCGCAAAATATTCACGGATATGCGTCCC
GTAATTACCCCGGATTTTGGGGTAAAAACGGGACACCCCCGGGGTAAAAA
CGGGACGCGTCCCGCATTTACCCCTCGTTGTTTTCTGCCTAGTGGGTTAA
AAACGGGACATGAACTAAACTTCGATTAAATGCTGATAAGTATCTAAAAT
ACGTCTTAACACTTTCTTAATGTCACAAATGAGGGTCTTTAATGTATATA
TTAGATATAAGGATCGCCTAGAAAAGAGAATTCTTAAGCAGTTTAGGCGG
AATCAGGCATTTGACTTAAGATCGGGATCGGGATCGGGAAGATATTAAAA
GACCACCAGTATATCATTAATGCTAATTTGTTTTTTTTTGTTTTTTTTGC
TTCAGGAAAAAAGATAAAGAAAGTTTATGAGCTANAATGCTAATTTGTTT
TTTTTTTGTTTTTTGCTTCAGGAAAAAAGATAAAGAAAGTTTATGAGCTA
TCGATATATACATCAAAGTTTCTTGGAAAGTAAGTATTTCATCTCGTGGA
ATAGAAGCTCAAAAAGAACAAGTAGTCAGTCATCTTATTATTTAGAGGTG
GTAATTGGTAACAATCGTTCATATTCCTGTCGTTTTAAATCTTTGACCAT
TTGGAAGGTTTTTACAACTAATGGATAAGCTGGTATATTCCATTTCCCTG
ATCCGTGCCCGGTCGGTCCAGACATGATTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032764XLOC_032764Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051755-exon-scaffold_204-1575043694:24633..24680TCONS_00051755-exon-scaffold_204-1575043694:24633..24680Clytia hemisphaericaexon
TCONS_00051755-exon-scaffold_204-1575043694:23899..24159TCONS_00051755-exon-scaffold_204-1575043694:23899..24159Clytia hemisphaericaexon
TCONS_00051755-exon-scaffold_204-1510915933:24633..24680TCONS_00051755-exon-scaffold_204-1510915933:24633..24680Clytia hemisphaericaexon
TCONS_00051755-exon-scaffold_204-1510915933:23899..24159TCONS_00051755-exon-scaffold_204-1510915933:23899..24159Clytia hemisphaericaexon
TCONS_00051755-exon-scaffold_204-1491911889:24633..24680TCONS_00051755-exon-scaffold_204-1491911889:24633..24680Clytia hemisphaericaexon
TCONS_00051755-exon-scaffold_204-1491911889:23899..24159TCONS_00051755-exon-scaffold_204-1491911889:23899..24159Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_204supercontigscaffold_204:23899..24680 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.92891	6.5701	9.23452	11.7842	2.86922	0.90915	2.2795	0.426808	12.5504	4.07148	22.9927	12.989	14.8577	17.3892	26.1763	19.6638	25.5552	27.2846	36.1874	30.7673	16.114	19.0643	11.7909	16.9874	0	0.339786	21.8805	21.2757	16.5305	13.233
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051755 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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