TCONS_00051735 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00051735
Unique Name	TCONS_00051735
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1194

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_203:128413..145779-

transcript sequence

>TCONS_00051735 ID=TCONS_00051735|Name=TCONS_00051735|organism=Clytia hemisphaerica|type=transcript|length=1194bp
TATTCACTCCTAAATCATACTATGTCTATCGCTGACGAGGAAGCGAAAAC
CCTAGTACATGATGATTATAAGGATTTTTGAGTGTAAGGTGTTCAGGCTG
AACTCAACTGTACGACTTTGAATGGTGgcagaaaatcaaaattcaaaaaa
acacgACAGGACGAGTCAACTTTATTCCAGATTTACTTTTTCCTAAGTAT
GATTCCAGTAAAAGAACTACAATACTCAGAAAAATATGATGATGGGGAGT
ATGAGTATAGGCACGTTATAATTCCAAGAAAATATGTGAAGCTAGTTCCA
CAAAATCATCTGATGACAGAAACAGAATGGAGAAATTTGGGAATTCTACA
ATCACCGGGATGGAAACATTATCTCCTTCATTCACCAGaaCCACATATTT
TGTTATTCAAACGTAAACTAACAAACACTGTACCACTTGGAAATGCTACC
AATCGAGCACCGCCTCAAATGGAGGTCTAATCTGCAGTTTCAATTTGAGT
GGAACAAAAGAGTGGATTCGACTAGGAGTTGTTTTATTGGTCAAGGAAAG
AAGATTTTAACCCTCTACTAACTTACTAACTTATAGTTATAGGATGGCAA
ATAAGGTTATTTTTAAAGAGTTTATATTGTACATTGAGAGCCATGTTTTT
AcgattttattttcttaacaCTTGTATCGAACACTTTGGATTTGCAACAT
ATAAGTATTATAGATATTTGATAGATTGTCAATATATACGATGTGAGTAC
ACCAAAGGGTATTAAAGGTGAAAATATAGCCGGAATATTTATGATCAGGA
AAGATTTTATTTAGGGGGAAAGACCGGTGTCTAACCAGGAACATCATAAt
taaagagaaaagtttgcagCCTGGATATCAAGGTGAGggaaaatttcacc
atccacTTTTGACTGTGGAAAATTTACTTTagaaaatttgcaattttccc
CGACCTTTGATTTCCATTTAACTTAATTTTTGGACAAATAATGAGCCCTG
TTTGGAAGTGGCTCTATCGGGcgttatcattgtttttttgaaaCTACTTT
CAACATAGAGATccttattgtaaagtttttcgaGTAATGTTTTACATATA
TTAGACTTTCATAATTTTGTTttaactgtacataaaaatgaaacttttat
gAAAAGCGTTAAATCTTTAAGCAAATTAATTGCTTCAAGCTATA

Run BLAST on NCBI

transcript from alignment at scaffold_203:128413..145779-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00051735 ID=TCONS_00051735|Name=TCONS_00051735|organism=Clytia hemisphaerica|type=transcript|length=17367bp|location=Sequence derived from alignment at scaffold_203:128413..145779- (Clytia hemisphaerica)
TATTCACTCCTAAATCATACTATGTCTATCGCTGACGAGGAAGCGAAAAC
CCTAGTACATGATGATTATAAGGATTTTTGAGTGTAAGGTGTTCAGGCTG
AACTCAACTGTACGACTTTGAATGGTGGCAGAAAATCAAAATTCAAAAAA
ACACGACAGGACGAGTCAACTTTATTCCAGATTTACTTTTTCCTAAGTAT
GATTCCAGTAAAAGAACTACAATACTCAGAAAAATATGATGATGGGGAGT
ATGAGTATAGGTTTGTATTCATTGTTTTAGTTAATTATCTTCATACAAGG
GAATCTCAATCTAGCCCAGTTTGCATCAATTGTAAAAGGGGTTACGCACG
ATACGAAAATCTCGTGTTCGCAAGCGAAAGGTTTTTTACACTATATACCG
TAGGTTTGCTAAACTTCCTTATATTCCCAGCGAAACTTTCCGATTGCTAG
TGTACAACGGAAAAGGACCAAAACGCCACAAAAGTAGATTTAACACGATT
TCTGCCGGAGACGCCTAGAAGCGAAAAGATCCCGGAGATAGGGCAGGTAT
GTTTTCCCAGGAATGAGAAAGTTAGCCATTTTTTACGATACAATTTTAAA
AAGTAGTACCCAGCCGTTTGCGTGATGCGTGATCGGGAAATAATTAGAGG
CATGATTTGGGCTATTTTCGCGATACTTGCGTGGTGAACAAACCTTTTTT
GGTAATTTTCATGATTGTCACGAGAGCAAGGAAAATTTCTATCAATGCAT
TTCAAACATGTAAAAACTCTGGTGAACCAAAAGAAAGTTGATATTCTATT
TTCAAAACAAACTGCTTTTTTTCAACTCAAATATCTTAAAATTTCGACCT
AAAATGAGAACATCATAAGGATTTTTTGAGAAAAAAAAATGTCTTATGAT
ACTTTGTGCAAAGTAACGGAATTTCGTTCCGTCTTTTTCTCTTTTCTCTT
TTTCTTAAATCAGGGGGCAATGTATATCTACAAAAATTGATCTTGTTTAT
CAAAAATTGAGAATATTTTACAATAAGAAAACCAAAGGAAAATTTATATT
TTCAAAATAGATGAAATATTTTGCATATACTTTCATATATAAAATATTGG
AAAAAAGGTTTAATATATATATAAAATATTGGAGAAAAGGTAAAATATAT
AAAATATTGAAAAAAAGGTAAAAAATTCGGTTGGTTCGAAACGCAGGAGA
CAGGACGCAGGAGACAGGACACAGGACGCAGGACACAGGACGCAGGTCAT
ACAAACTACAGACCGGAAAATTGTAACATACNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTGTCACATGTCAATGACATTGAAAA
GATAACTGCTACTATACATGCGTGATTTATGTGTAATATATAATACAAGT
ATTACAGGTCCGTGTTATACACGGCACAGAATGCAAAAGCACGTGGCAAG
TATGTGGATAGATTTTGACCTTTAAAAAGGTTCTATACCAATGAAATACC
TTCATAATGATATTTCTAACAATTACAAGTGTTTTTCAAACATTTTCTTT
GTCTTTTACAGCAATTAAAGCTGACCTGTCAGCACTGTCCTGTGTCCTGT
GTCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGTAAAAAATTATAGCATCCAAAAGTTAT
ATTTTTTGAAATGCATGCCAAAAAGTAAAAAACTTTCAAAACAGGGAAAC
AATTTCATAATTTCCAACATACACTTTGTTGAATATAAGAACAATTTTAT
AAGAACAATGCTGAGCCTGAAAACTACTCAATTTCAAGCAATATAGGGGT
CAAAGTAATAAAAATTGGGTATAATGCCTAAAATACCTCACTTACATCCT
ATTAATAAGAATATGATAGAGGCTCAAAAGTGCAAAAAAAAAAAAGANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAAAAATTTTACTGGTTCTTATATTAAAAAAAGTGTAATGCAAAAGAAG
AAAAAACAAATCTCATATATACTGGGAAACATTTTCATAATCTGAAAGAA
CGTAGAAAGGAAAAAATTCCCCTAGTAGAAGGCATTTTATAATTTTCAAA
AGCATGCTGCAAAAGCAAAAAATGTCACATACTGTAATTGGCAATCATAA
TTTCCAAAAATATCAAAAAGAAAAAAAGTCGTCATGTCGGATATTGCTTA
AAAAAATTTTCAATTGAGGCGAAAATAAAAAAAAGTAGTGTTTTCGGAAA
CCAGCCGGGTGAAAAATAATAATTTTCTGATCCGTTCGCAGACTATGGGT
TCATCAATCTGTAGTTCATTATAAAAATAATCAAGTTGGATTTGTGAAGA
TTTGTTTGTTAGTAATTGATACATTATGGTATATTCAGGGCTTACTTCTT
ACTGTTTGTACATAAAAGTTATCTTTAAAGTTCTATTTCAATGATCTTAT
TACTTAAAAAAGTTATCAAAAAAATCAAATAAAATTTTTTTTTCTGGCCG
GCCGCATGAAAGCTTTTTTCCTTCACCCGCATTCCGGAAACACTACATTT
TTTTATTTTTGCCTTACACAACCAAAGATTTTCCACGTTTAAAATGCACG
TGAAAAAAAATGTCCACAGCAAAAATTTCCACGTTTTAAACGCACGTGCA
AGAAAATGTCCAAATTCACAACCAAAAGCTTTCCACGTTTTAAACACACG
TGGAAGAAAATGTCCAAATTCACAGCAAAAATTTCCACGTTTTAAACGCA
CGTGGAAGAAGATGTCCACAGCAAAAATTTCCACGTTTTAAACACACGAC
GCAAGAAAATGTCCAAATTCACAACCAAAAGTTTTCCACGTTTAAAATGC
ATTTTAAAACACCAAGGGAAATCAATCATCAATGTACTGTATCAATCAGT
AAATTTTGCTCGGGGTTTAAATTTTTACATTATTAAGCTAACCAGTTCAT
ATCCAACCACAACCATTTCCTTGGCTTGGCTTGGGTGCCGCATATCTATA
CCATCATCTGACCATCATAAAAAAGTGAGTTCAAACTTTTTTGATGTTGC
AAGTATTACATTTTTCCAATATAGCATGGTCAGATTTATCCACAAATATT
CAGTCACTGTTAGAATTTGTGTAAATATACGGGCAAAATGAAAGTTGATA
AAATGTCCTGTTTTTCAAGAGATTGCATCAATCTAATCTCTCATGCCAAA
CCAAACGAAACATCAAATCCAGGAAGGAATAATAAGAAAACTTCATCATC
AACCATTTCTTGTAATAATCACACAAAAATCATGATCCAATTCAGCTCAT
TAAAGCATAGAAACCAAAGAAAAATAGCGAAAGAGCAGTAGCAACCAGTT
GTTTATTTTTGCCGCCATCTTTGTTTTGACTGTTAAAAAGCAGTATGGTC
CGATCAACAANTTAAGTACCATACTAAAGCGAATAAAATCTAATACAATT
GAATCAATCGAACGTAATCGAATACAATCGAACGTAATCGAAGCAATCGA
ACGGCAAATCCTGGGTAATATTCGATTGCCACTNTGTTTTGACTGTTAAA
AAGCAGTATGGTCCGATCAACAATACGCTTCCGAACCGGGCGACGTTTCC
CGATCGAGAAGGATACTTATATTTTCCCCCGACGTTTCTCGAAGAAATGA
CGTCTTCATCGTCGTATNTTGCGTTCGACAATCGAATTGCAATTATTCGA
TTGCGTTCAATTGCGTTCGATTGATTCGGCGTTCGATTCGTTCGATTGAC
ACCGTCTGGCAATATGCATTATGTTACGACCCTGCCTATGCCCCGGACAG
TCCGGGGCAAATGTCTAGGGTCTGAAAAAAATAACTTTTTCCCCGGACCT
ATGTCCGGGGCTCCAATTTTTGCGCCATAAATTTACCCCGGACGTATATC
GCCGAGCACACTTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGTAAAAATCGATTTTATCACTCCGCATA
TCAGCTTTTTTTTCCCGCGCTTTTGCCAAAAGAATCGCACTCGCTCGCTG
CGCTCGCTCGTGCGTAATTATGCAATATCCAGACGGTGTCAATCGAACAA
CTTCGAACAAAAATCGCAATCGAGCCAATCGAACGTAATCGAACGCGATC
GAATAATTGCGATTCGATTGTCGAACGTAATCGAATCTCAATCGAACGGC
CGATTCCTGGGTAATACCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAC
CCCGGACTGTCCGGGGCATAGGCAGGGTCGTATTATGTTTTATGCATTTT
GAACCTGCCGGTGTGTCGTGGCACACAACACGTTTGCTGCTCAAGATCTC
GAGTGCACAACTCTGAAAAAGACGAGTGCAGGTGCAAAATTTATAGTTTT
CAGGTGCAAGAGTACAGAGTTCCGCTATTTTCTCTTAGCCCTGGCAATTC
AGCTTTTTTTGCTGCGGCAATCATACTCTTTATCAAATTTGCTGAGGCAA
AACAGCATTTTGCCGCGGCATTTTTTTGTTTATTGAATTTTGACTTGAGA
AACTCCCATACAGCCTATGTCATCCAAAGTACTAGACGTCTCCTATATTA
TCAGAAAACAAAGAACGATTTGGCACTTTTGAAGTTTCTTTGATTTTATT
AACATTTGTCAGAAAATTTACCGTGGCAAACAAGGAATAATCAAATTTAC
GGCAGCTTTTACCGTGGCATTTGCCTCGTGCCGCAGCCAATTGCAAGGAT
GGACTTACTTTTGGATACTTTTGGATGTATTTGAGCGTACCGCTCTTTGA
TCCACACCACAATCTTCATTCAATCCACAATTCCTGAAGGAAAAAATGGA
TCAGCAGAGAGATTTCATGTCTAAAATTGAGTTTGAGTCAACTCTCCTGC
ACCCTGTATAACCACAGATTTGGGGTTCATCAGGAATTTTTTGCAAGTGT
TTGTCAAGTGCATTTTTGAATTTGTCAACAGTTAAGGGGCCGTCGACAAA
CGATTTTCCTTTTTTTTAACGGCTTCTGGCCGTAAGGGGTGGGAGGGGGT
CACTGCAATGCAGTTAAAAAAGTTTTTAAAAAAGGGAAAGTCTCACTTAC
AAATTTCATCAGTCCAAAAAGTAGAAAAATGTGAAGAAAGGCTAATTGCT
AAGACCAAAGCAACCACACAACATTCACCTTATTCCCGATCACCAATTAA
ATGCTTCAACAAGAAAAATGACTGGTCACGTGACGAAAGTCAGCAATTTT
TCCCTCCCCNCACCAATTAATGCTTTGACAAGAAAAATGACTGGTCACGT
GACGAAAGTCGGCAATTTTTCCCTCCGCCTCGTTGACTCCTTGCTCCACC
CATCCCGCCCTGACTTGCTGCGGGGCTTGGAGTTTCAAAATTAGAAGGTC
ACGGCTCAAAACCACATGTTTATTTCGTGCGAAAAGAAGAACTTTGAGGA
TTACGAATCGAAAGAACATGGCGGCCATGGACCAGTGAAAGTATTTACTT
TTGAAGAATTCTTTTGGCCGCTAAGACGTAGGGGGGAGGGGGTCTAAACC
TTAACGGCCTCAGGCCATTAAAAAAAAGGAAAGTCGTTTGTTGACGGCCC
CTAAATTTTTCAAGTTTCTACTGCTCTTTGGCATTGTATTGAAAAGTTTT
GCTCCTTGCATAGTCAGGGTACTGTCACGTAATTTTGAATTGTTTGGACC
AGCTTATTTGTTAAAACACATTCGTCCTAATCTTGTATGGTCTTTAGATT
TGAAGCAATCATTGATATTTGGCACAAGATTTTCCAATATTTTCCAGGTG
TATATGATCCTGTAGCGTTCTCTCCTTCTTTGAAGTGAGTATATTTTAAG
CTTCTTTAGACTTTCCCAATAATTTTGGTGTGTTCCTTTTATTTGTTTTA
AAAATGATTTCTGGAACTCTGCAAGTCTTTGAATAAGACTAATAGTACTG
GGGTTCCATAACGCTGAGCAATAAACCAGTATAGGGATCACAAGTTATTT
ATAGAGAGTGATCATGGTATGTGTAGAGCGGGAAGTGAATGTTCGTAATA
TCCATGAAATGATGTTTTTGGCTTTTTCAATTATTAATTGATTCAATTTG
ATGTTTAAATACTTGACGATGGATTGGACAACATTCTCATCTATGTCTCC
AATGAGTATCAGGAAAATCAGGGGTCCAAGTACACTTCCTTATGGAACAC
CTGAGATAACTTCTTGATTGTTTGATTTCACACCATAAACCACTACAATT
TGTTGCCTGTCTCTCAAAAAGGACTCTATCCAATTATAGATTTTACCAGT
TATTCCTAGCCTTTTGAGTTTTGACAGAACAGTTGAATGATCCACTTTAT
CGAAAGCTTTAGAAAAGTCTAAGTAAACAACATCTACATTGGTCTCTTTG
TCAATTAAGTTTAATATAAGATGGATTAGCTGGACTGAAGTACAGCTAAT
TTTAGCAATTTTTTGCCTATTTGGCATGGGTGTCAATTTCCAAATTATAG
GTGCACCTTGTCCATGCATATTTTGTCCCAGGCGTAGTTAATCGATATAA
TCGATAATCTTGAGTAATTGATAAATAATCGTTAAGTAATCGATGGATTA
GATATCGATTAACCGATAGAATCGATAGGTAATCAGACCTTCAAAAAATC
GATTATTTCCAAGCTATCGATTACTTATCGATCACATATCGACTACATAC
CGTGAGATTGGGTAACTTGCATCAATGGAGAGGCTAACATGCATAGCCCT
CAAATGAAAGACCTGGCTGGTCATTTAAATACAAAGTTAAATCAAAACAA
AAATGGTAGAGTAAAGATGCGAGCGGAGCTGCGTAGTTGTATTTTAATGA
CCAGCCAGGTCATTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGC
AAGTTACCCAATCTCACGGTACAACCTATCGATTACTTATCAATCATGTA
TCGATTGTTAACAATCATCGATTACTTATCGCTCATGCATTGATTACTTA
TCAATTATTTACTTATCTTTGATCACGTATCGTTATCGATTATATATCGA
TCGTGACCGACTATTGACTACATTACCGGCCCTTTTTACACCAGCCCTTA
TTCCACCAACGAGCCCAAAAATAACGCTAATAATAAGGTCCAAATTTAAT
CTCGCGACGGTGAAAGTTAATCCAATTAAAGTACCACTCCCTAAAATCTG
ATAAATAATCGATCACGAATCGATAGTTGATCGATTAACTGTTTGATTGA
TGATTAATCAATTTTTGATCGATATGCAATCGATCAAAAGCTGTGATAGA
TAGCCGATCAATTTTTAATCGATACTTAATTTAGTCGAAGTATAATCGAT
CTATTGAAAAAATCTTGAGTATCGATTATCAAGTATCTATCGGTTAATCG
ATATCTAATCCATCGATTACTTATCGATTATTTATCAATTACTCAAGATG
ATTATCGATTATATCGATTAACTATGCCTGGTTTGTCAGTGCCGTGCATA
TTTTGTCAACATCCTTTTCATTGGATAAATACCACTGAAATATACAAGAT
AAGTAAACATAAATTTATCGCACGCGAGCACGACTTAGCTAAGCGCACCT
CTATATACATTCATTATCTAAGAATTGAAGCGGGCAAAGATTACCGCGCA
GGCTTATGGTCGACAAAGGTTATTGAAGTTATTGAAGATATTTTCCAAGG
TACGGTCAACTGCTCTAACTTGGAACTATCTGACAAAACATGGGACGTCA
ATTTGGCCACCATTACACCACCATTTTACCGAAACCTCTAAAGTCATTTG
ATTTGACACGCGCCCTGTTGCTAAGACCTTTGCTTGAAATCAAAAGTGAA
ACCAAAATAATTTAGCACACACTGCCGTTCGGGTAGTATAGTATCGATAA
AGTAAGGGAAGCCCTGACTGGATAGAAAGTATGATTGATAAACTTGGTGG
AGTTATCAAAACAAATTTGTTGTCAAAGAGATTAACAGTAAGTGAAAATA
CAGGCCTGATATCAACAGTCCCATGTTTCGACCAACTGTCCCAAGTTAGA
GCAGTTGACGGTAGACCTTTGGCTAGCTAGGCATTTTTCATCATTGAAAA
AATATCTGTTTTCTTGTTCAAAAGTTGCCAAAAAGAGCAATAATTGATGT
TTTGGCAAACACGATGGTCTTTTGAATAACTAATTACTCCCCATACATTA
CTTTCCCTCAGCCAATAAAAACATGATAAATTATCTTGTCTCTATTATTA
AAAAGACCGCCGCGTTCGCTAAAACAACTATTGCCGTTCTTTATCTTTAA
TCACTGCCCAAATTTGGGCCGAAAAGTACCTAAAAATGGGGCTTTTTGGA
CTGTGAAATCGCTTCATTAGTTTTTTCTGATTTTTTGCATAAAGATAAAG
GGCAAGGTTCTCTAAAAAGTGGGTCAAGTAGTTTTTTTCAGAAAATTTTT
TTTGGCAGTAAAAATCAGATTTTCGTATTTTGGGGAGATTCCCTTTTGCC
ATATCTGACATCACAAGTGATTTGAAGAACGTTCTACACTTTTTTACTCT
CTTGTTATTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCC
GTTCGTTCGTTCGTTCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNCCCCCCCCCCCCCCGGGAGAATTTCAAAAGAAGACATTTCATT
TCAAATTGTTTTTTCGTTTTAGGTAGGGGGCTCTCTATTTAGAATTTGGA
TCGAGGCTTAATCTCAGGGGTGCTGAACCTTCAGGGGGGGATTCGACCCC
TCTGCACTCTATGAGTTTCTAACTTTCCTGTGGGCGTGATTTGGCGTTCT
GTCATCGCAAAATATTTTTTATGAAAATTTACCATATTTCAACCCTAATA
TAATCTAGATAGAGGACAAATATTAACCTCGATTCTCTTTTGGTTGTATT
TTGCAATTTCACAATTTCACGATAAAAAGAACTATTTAGAAATTATTTCC
TTTAACAGAAGTTGAATCAACATTGAAATATTTAAAGAAGTCGTACTTTA
TGCGTACAAACTCTCACAAATTTCGCGAAATCTTAGTTTTATGAAATTTT
AGTTTATGCACCGAAAACGTGAATTTTCTACATTTGCGAAAGTTTATGCT
TGCGAAAAATTATTTTTTGTCATCGCGAAAGTAAATGTCATAGATTTCGC
ATATTTTTTCGGCTGAAGTTTTTGATTATTCAGCATGGCTTTGTTTTATG
ATGTGAAATCAAGTGCGTTTTACTTATGGGTAATGAATCAACGGATCTTG
CACTAATGTACTTCCCAGTTTTCTCAAAGGTAACGAATCGAGTGGGGATT
GAACCCACGATCATTTGTTTTATGTTTTTCCACTACGAACTTCATCATCA
TTTCCTGTCTCATTTTAGGCACGTTATAATTCCAAGAAAATATGTGAAGC
TAGTTCCACAAAATCATCTGATGACAGAAACAGAATGGAGAAATTTGGGA
ATTCTACAATCACCGGGATGGAAACATTATCTCCTTCATTCACCAGGTAT
GATGATGAGATTTTATTCATCCTGTACATCATTTTTGCAGCACTTACCAA
ATCTTGATACCTTATCGGGGAAAAAAATGTTGGAGTTTCAATTAGTTGGG
GAAAAATTTCCTCACCCCCTCAAAAATTTTGTCACTTTCCCCCGACATTT
TTTCCCCGATAAGATAACTCGAATATATATCATGACCTAAAACTTGGATA
GATGCAGGCTTATCTGCTCACAGCTAGCCCTAATTGAAGTGACATAATTT
TCTTTTTACAGAACCACATATTTTGTTATTCAAACGTAAACTAACAAACA
CTGTACCACTTGGAAATGCTACCAATCGAGCACCGCCTCAAATGGAGGTC
TAATCTGCAGTTTCAATTTGAGTGGAACAAAAGAGTGGATTCGACTAGGA
GTTGTTTTATTGGTCAAGGAAAGAAGATTTTAACCCTCTACTAACTTACT
AACTTATAGTTATAGGATGGCAAATAAGGTTATTTTTAAAGAGTTTATAT
TGTACATTGAGAGCCATGTTTTTACGATTTTATTTTCTTAACACTTGTAT
CGAACACTTTGGATTTGCAACATATAAGTATTATAGATATTTGATAGATT
GTCAATATATACGATGTGAGTACACCAAAGGGTATTAAAGGTGAAAATAT
AGCCGGAATATTTATGATCAGGAAAGATTTTATTTAGGGGGAAAGACCGG
TGTCTAACCAGGAACATCATAATTAAAGAGAAAAGTTTGCAGCCTGGATA
TCAAGGTGAGGGAAAATTTCACCATCCACTTTTGACTGTGGAAAATTTAC
TTTAGAAAATTTGCAATTTTCCCCGACCTTTGATTTCCATTTAACTTAAT
TTTTGGACAAATAATGAGCCCTGTTTGGAAGTGGCTCTATCGGGCGTTAT
CATTGTTTTTTTGAAACTACTTTCAACATAGAGATCCTTATTGTAAAGTT
TTTCGAGTAATGTTTTACATATATTAGACTTTCATAATTTTGTTTTAACT
GTACATAAAAATGAAACTTTTATGAAAAGCGTTAAATCTTTAAGCAAATT
AATTGCTTCAAGCTATA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032755	XLOC_032755	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00051735-exon-scaffold_203-1575043694:145520..145779	TCONS_00051735-exon-scaffold_203-1575043694:145520..145779	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1575043694:129484..129611	TCONS_00051735-exon-scaffold_203-1575043694:129484..129611	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1575043694:128413..129218	TCONS_00051735-exon-scaffold_203-1575043694:128413..129218	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1510915933:145520..145779	TCONS_00051735-exon-scaffold_203-1510915933:145520..145779	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1510915933:129484..129611	TCONS_00051735-exon-scaffold_203-1510915933:129484..129611	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1510915933:128413..129218	TCONS_00051735-exon-scaffold_203-1510915933:128413..129218	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1491911889:145520..145779	TCONS_00051735-exon-scaffold_203-1491911889:145520..145779	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1491911889:129484..129611	TCONS_00051735-exon-scaffold_203-1491911889:129484..129611	Clytia hemisphaerica	exon
TCONS_00051735-exon-scaffold_203-1491911889:128413..129218	TCONS_00051735-exon-scaffold_203-1491911889:128413..129218	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_203	supercontig	scaffold_203:128413..145779 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.48267	1.69947	0.986625	0.551576	65.6372	52.8911	38.8514	36.9792	22.7632	15.0725	18.0349	15.2546	9.0241	5.84652	15.344	11.3785	15.4191	17.5282	6.52204	8.16986	27.8594	24.3044	26.2238	23.6168	50.7878	50.734	27.8227	22.5886	27.6642	26.7463

Blast

[Close]

BLAST of TCONS_00051735 vs. Swiss-Prot (Human)
Match: CKS1 (Cyclin-dependent kinases regulatory subunit 1 OS=Homo sapiens GN=CKS1B PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.568e-27
Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1

Query:  211 KELQYSEKYDDGEYEYRHVIIPRKYVKLVPQNHLMTETEWRNLGILQSPGWKHYLLHSPEPHILLFKRKL 420
            K++ YS+KYDD E+EYRHV++P+   KLVP+ HLM+E+EWRNLG+ QS GW HY++H PEPHILLF+R L
Sbjct:    4 KQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPL 73

The following BLAST results are available for this feature:

BLAST of TCONS_00051735 vs. Swiss-Prot (Human)

BLAST of TCONS_00051735 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CKS1	1.568e-27	64.29	Cyclin-dependent kinases regulatory subunit 1 OS=H...	[more]

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TCONS_00051735 (transcript) - C. hemisphaerica