TCONS_00051701 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051701
Unique NameTCONS_00051701
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051701 ID=TCONS_00051701|Name=TCONS_00051701|organism=Clytia hemisphaerica|type=transcript|length=175bp
tttattttaggaGTAGGGACCTAGTATATATAGAGGTAGAATTTTCTTTG
TATGTAGGCAAGTAGACAAGTGAAGTTATTTCAACCTTCATCGATTTATT
TTCACAATGtaagtgtaatattttttgtttgtatctTTAGGAGCTGGTTa
tgttaaagattatttttgtaGGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_202:513492..513666

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051701 ID=TCONS_00051701|Name=TCONS_00051701|organism=Clytia hemisphaerica|type=transcript|length=175bp|location=Sequence derived from alignment at scaffold_202:513492..513666 (Clytia hemisphaerica)
TTTCCtacaaaaataatctttaacatAACCAGCTCCTAAagatacaaaca
aaaaatattacacttaCATTGTGAAAATAAATCGATGAAGGTTGAAATAA
CTTCACTTGTCTACTTGCCTACATACAAAGAAAATTCTACCTCTATATAT
ACTAGGTCCCTACtcctaaaataaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032732XLOC_032732Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051701-exon-scaffold_202-1491911889:513492..513666TCONS_00051701-exon-scaffold_202-1491911889:513492..513666Clytia hemisphaericaexon
TCONS_00051701-exon-scaffold_202-1510915933:513492..513666TCONS_00051701-exon-scaffold_202-1510915933:513492..513666Clytia hemisphaericaexon
TCONS_00051701-exon-scaffold_202-1575043694:513492..513666TCONS_00051701-exon-scaffold_202-1575043694:513492..513666Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:513492..513666 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051701 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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