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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051687 ID=TCONS_00051687|Name=TCONS_00051687|organism=Clytia hemisphaerica|type=transcript|length=1137bp
gaaataatgaaattttcatgcgggtgctttttagagatgcgggcggccga
cggtaaactcacATGTGACTTTCATCGGCCTAATATGATACCTCTAGTTA
CCGATTCAAACAAACCATTTCCTCCTTTGAGGTGGCTGACAAAATACATA
TTTGGACCTGGAACCACACACTTTActcattttaccatttttttcatcaa
aatatgttctttgtgtaaataccgatcatcatataaaatttcaacgttat
atttgaaatatttttcaagttattcaagaaatactatatttttgtcaatt
tttgagttcactaaatgtcacactatttttgaacatGATCACACCAATGG
TTAACTTTTTTCCTATCATTTAAAAGGTGACAACCATCAGACTCTGTAAT
TTTATTGTAATTATGCAAGCCACCACTTGAAATCTTTAGCTACACGTAGA
CACCTCGTAGtcctatacagggtgtccctaattaaagtatcgagtttgaa
catgtgattgagtagaaaagtttgtgtgtgttatcgctaaaatataagaa
cgttctccatcacacaggcttattacaaaaggtagttacaacctataaat
taatcgtaatgacaaagaaaaaagagggagagcttaaaatacaattttgt
gaatacacacatAAAACGTTCATTGATTACGATTTGTTCCTCGCGTCGTT
CGTTGATTATCGTTATTTCCCCTCTTTCGTTGATTATCGTTATGCCACCC
TCATTATGTCCATCCATTTCCTCTTCCATTTGTCCATTCTCGTTGTCGTC
TTCAAATCCTTCAGAGAGGTCTTGGCTTTCCGATGGCAGACCGAGGTCCT
TCCGTACCTTTCTCCGCCTTTCTTTTAAATGCTCGCCCTCTTCGAGCTTG
TGAGGTCGATATTCCTTTATTTTTTGCGACCTTCCTATAGAATGAAAAGA
GTTTCACTTGGGTAAAATTAATACTTGAATCTATATAGCCTAACCCAATT
TCAAgtaatttaggggtcaaagtaaaaGTTGGGTATAAATCCTAAAATAC
TTCAATTTCACCCTATagataagaacaggataagagcCGAGCCTCATTAA
AtctaatcttataaaaaaagtgcatTCGGTCGATCTT Run BLAST on NCBI transcript from alignment at scaffold_202:111832..112968 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051687 ID=TCONS_00051687|Name=TCONS_00051687|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at scaffold_202:111832..112968 (Clytia hemisphaerica)
AAGATCGACCGAatgcactttttttataagattagaTTTAATGAGGCTCG
gctcttatcctgttcttatctATAGGGTGAAATTGAAGTATTTTAGGATT
TATACCCAACttttactttgacccctaaattacTTGAAATTGGGTTAGGC
TATATAGATTCAAGTATTAATTTTACCCAAGTGAAACTCTTTTCATTCTA
TAGGAAGGTCGCAAAAAATAAAGGAATATCGACCTCACAAGCTCGAAGAG
GGCGAGCATTTAAAAGAAAGGCGGAGAAAGGTACGGAAGGACCTCGGTCT
GCCATCGGAAAGCCAAGACCTCTCTGAAGGATTTGAAGACGACAACGAGA
ATGGACAAATGGAAGAGGAAATGGATGGACATAATGAGGGTGGCATAACG
ATAATCAACGAAAGAGGGGAAATAACGATAATCAACGAACGACGCGAGGA
ACAAATCGTAATCAATGAACGTTTTatgtgtgtattcacaaaattgtatt
ttaagctctccctcttttttctttgtcattacgattaatttataggttgt
aactaccttttgtaataagcctgtgtgatggagaacgttcttatatttta
gcgataacacacacaaacttttctactcaatcacatgttcaaactcgata
ctttaattagggacaccctgtataggaCTACGAGGTGTCTACGTGTAGCT
AAAGATTTCAAGTGGTGGCTTGCATAATTACAATAAAATTACAGAGTCTG
ATGGTTGTCACCTTTTAAATGATAGGAAAAAAGTTAACCATTGGTGTGAT
Catgttcaaaaatagtgtgacatttagtgaactcaaaaattgacaaaaat
atagtatttcttgaataacttgaaaaatatttcaaatataacgttgaaat
tttatatgatgatcggtatttacacaaagaacatattttgatgaaaaaaa
tggtaaaatgagTAAAGTGTGTGGTTCCAGGTCCAAATATGTATTTTGTC
AGCCACCTCAAAGGAGGAAATGGTTTGTTTGAATCGGTAACTAGAGGTAT
CATATTAGGCCGATGAAAGTCACATgtgagtttaccgtcggccgcccgca
tctctaaaaagcacccgcatgaaaatttcattatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051687-exon-scaffold_202-1491911889:111832..112968 | TCONS_00051687-exon-scaffold_202-1491911889:111832..112968 | Clytia hemisphaerica | exon |
| TCONS_00051687-exon-scaffold_202-1510915933:111832..112968 | TCONS_00051687-exon-scaffold_202-1510915933:111832..112968 | Clytia hemisphaerica | exon |
| TCONS_00051687-exon-scaffold_202-1575043694:111832..112968 | TCONS_00051687-exon-scaffold_202-1575043694:111832..112968 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:111832..112968 . |
Blast
The following BLAST results are available for this feature:
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