TCONS_00051636 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051636
Unique NameTCONS_00051636
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2378

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051636 ID=TCONS_00051636|Name=TCONS_00051636|organism=Clytia hemisphaerica|type=transcript|length=2378bp
CCATAATTAAAGCTCCGTTCCCCTTTCAGCACCTGCACTTTTCCAGTCAC
ttcaacaatttgaaaaaactttaattctttgaatgatgaaagcaaaaaaa
agaaaaaaagttatgaccaAAACTACTGGATGGAGGTCGACTGCCTGACT
GCTGACTGCTGATCTTTGAATCTTTCTCTTTGatggaaaaaagagagtaa
GGTCCTATactagaaaattattttaaatttgtttctcTTAAAATTGACCT
TATGGAGATAATAGCTCGGAAACTGCAGTAATAAAAACGCAACAATTCTC
CATAGTGTGAAAGAGGTATTCGAGTTTGAAGAACCGAGCGTGATCGAAGC
GGAAAGAGTTTCAGCAGcatttttttcacattgttTCCTGCACCACGAGC
CTGACAGCCTGACAACAACACTTCCAGTCTTTATATCTCAGTTAGCTGCA
TCACTTTGCTGAAAAGACCAAAATGGAAGAATATGCAAGAGAACCTTGTC
CTTACCGAATCATCGATGACTGTGGAGGTGCGTTTGCTATGGGTGCCATT
GGAGGTGGTTTGTTCTCATTAGTCAAAGGATGGAGAAATGCTCCTGTTGG
CACCAGAATGAAGGGAAGTATCGCAGCAGTGAAGACGCGTGCCCCTGTTC
TTGGAGGCAATTTTGCTGTATGGGGTGGTATGTTTTCAACATTTGATTGT
TGTCTTATGTATGTACGTGGTAAAGAGGATCCTTGGAATTCCATTGGTAG
TGGTGCACTGACAGGTGCTGTACTCATGGCTAGAGCTGGACCTGGTGCAA
TGGCTCGTTCAGCAGCAGTGGGTGGTATCTTACTTGGTCTCATCGAGGGA
GTTGGTATCCTCATTACCAAAATGACCGCAGAACAGTTCAAACCAGTTAT
GCCACAAATGCCAGCAGATCCCGCCCAGCTTCCGCCACCACCCACCAAAC
CATCGCCCCCGCCTCCAGATGCAACAAGTGGTGGCCAGCCTACTTTTCAA
TGATGTGTTGAATTAGCATAATGAGAAGGAAATGTCAATGTAAGAATATT
ATTTGTGTAATTGTACACTTGCTCTNCCACAGTGAGAAGAAAATGTCAAT
GCTGGATGTtgtcaaaaaaggaaaatgataatCACAATAAGATGCTATTG
AATTGCAAATTATGCTTGGTTCAACAAAAGAGTGTTGTCAATTGGTGGTA
TGTTATTATTGATGTTCCTTTTGATGATGGTTGGATGAATTCAGCTTTGT
TAATCGCCAAGAGAGGTTTTCTGGCGAAGCAACCATGCAAGAAAAAAGCT
TGAATGAAAGTGGATTTTTATGTTAGAGGTGTTTTCAGAGGAAGCAGGTT
TTCTGACAGTACTTTTCAAGGATtaaaagtgcattttatttgtcTGTAAA
TGTTGCTATGACCACTTGGGTATTTAGTATCAAAAGAGAACTGATTTTGC
AATGTAACTctaatgtttgaaaaggatgaATATTTGTTGCGAGAATAATC
CAAACTACTTGAATTTAATTAGACAGTCTGAACAACCGAGATACCTGAAC
TTGAGACTACTGTCCAGAAAATCTGCTTGGGGTTGAAACGCTTCAGGTTT
CCCAGCCTTCCACCGAAattgttttagaatttttataaaacgtagatata
aattttatatattttttgtcaacaaaatGGATAATGAGAAAATTTACTCC
CTtagaaaaatagaaatctcttaattgttttttttcgcCAACTATTTTAG
CTGAATATTGAACAAATCCGGTCTAAGTCTAAATCTAATAGAACTTTATT
Ccaataatcgcacgatgagttattttttcttctttggcgcggcttcaaag
agagcaattaatcgttaattgcatcctgtagagagcaattaatcgttaat
cacactctccaatgctgcgccaatgtttacaaaattgattttgatgtttt
ttcttacatttctttgcatcgaacgttttaattgcattcgaaatttattt
tgtgagaaagaaaatcaataaacaacaataaaagaaagacataaaaagaa
gagacaaatataaaactctcagtgtaatttctgtaatttactttcctaac
tgggaaaaagtagtgaaagccattgtgcgattagctcgtaatcacataat
aactcNACTTGAGACTACTGTCCAGAAAATCTGCTTGGGGTTGAAACGCT
TCAGGTTTCCCAGCCTTCCACCGAAattgttttagaatttttataaaacg
tagatataaattttatatattttttgtcaacaaaatGGATAATGAGAAAA
TTTACTCCCTtagaaaaatagaaatctcttaattgttttttttcgcCAAC
TATTTTAGCTGAATATTGAACAAATCCG
Run BLAST on NCBI

transcript from alignment at scaffold_202:552019..561856-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051636 ID=TCONS_00051636|Name=TCONS_00051636|organism=Clytia hemisphaerica|type=transcript|length=9838bp|location=Sequence derived from alignment at scaffold_202:552019..561856- (Clytia hemisphaerica)
CCATAATTAAAGCTCCGTTCCCCTTTCAGCACCTGCACTTTTCCAGTCAC
TTCAACAATTTGAAAAAACTTTAATTCTTTGAATGATGAAAGCAAAAAAA
AGAAAAAAAGTTATGACCAAAACTACTGGATGGAGGTCGACTGCCTGACT
GCTGACTGCTGATCTTTGAATCTTTCTCTTTGATGGAAAAAAGAGAGTAA
GGTCCTATACTAGAAAATTATTTTAAATTTGTTTCTCTTAAAATTGACCT
TATGGAGATAATAGCTCGGAAACTGCAGTAATAAAAACGCAACAATTCTC
CATAGTGTGAAAGAGGTATTCGAGTTTGAAGAACCGAGCGTGATCGAAGC
GGAAAGAGTTTCAGCAGCATTTTTTTCACATTGTTTCCTGCACCACGAGC
CTGACAGCCTGACAACAACACTTCCAGTCTTTATATCTCAGTTAGCTGCA
TCACTTTGCTGAAAAGACCAAAATGGAAGAATATGCAAGAGAACCTTGGT
AAGTCTAGATATAGACATAGACAGTCAGCTCTTGTATCTGAATCTGTTAA
ACAAATTTTAACTTTTGTGTTAAGGGGCGACGTCCATATTCAAAGTCGCC
ACGCGTAACGGGAAAAGACCGTTAGTGGGTAGGTATATTGGAATGTTGAG
AGTTAGCTGTGGCATTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATCATGAAGACCG
TTAAGAGGGTGGGTAGGTATGTTTGAAAACTAACGGTCTTTTCCCGTTAC
GCGTGGCAAGATTGAATATGGACGTCGCCCCTAAGGTGTGAGTGCTGGTG
ATTTTTTTATTTGGATTTTTTTCTGACACTGCTGGACTGTCAATGGGCCA
TTCCAGAAAAAAAAAATTACCCCCTAATGGATGACATCAATTTTTGAAAT
AAATTTTGGCACGGAATTCCAGGCAAACTTTAAAGAGAAAGTATCGGAGC
GGAATTCCATGAATTTTACTTAATTTTGCATTAAAGTATTGGAATTCCAT
CATTTTTTTAGGTTACAGTAACGGAATTCCACGGTTTTGATAGGTATTTT
GTAAATTTGTTACGGAAATTCCGGACTTTCTTGAAAGCAATTTGCTACGG
AAATTCCATGTCGTCCAGTGTCGTCCATTATTGGGGGGTAACGAATAAAA
ACTGGAATGGCCCAATATCAATATAAAAGGGGTTGTACCCGCACCAGAAC
TCTCACGTTCCTCCACTCTGTTTTGTTTACATAGCAAAGAGGGTGACAAA
AGTTAACAACAGAGTATAAAATCGGTTGGTTCGAAACGCAGGAGACAGGA
CGCAGGAGACAGGACACAGGACGCAGGTCATANGAACAACATTATATAGA
CCTTTTTTCAAAGAGGACGTCCTGTTGAATAATCATGTAGTCCAGTCATA
AAAACAATGATAGAGCCATGCATAATTACTGTATCATGCATATTGTAATA
ATTATGCATGGTATTATCATTGTTTTTCTGCTGGACTACATAATTATTCA
ACATGGTGGCCTCTTTGAAAAAAGGTCTATTCGTCTCACCCCCCCCCCCA
CCAGAGACTGGACTCAAGATTATTGCATTTTTTCTATTTTGGTGACATCA
TCAGGCCCAAAATAGTGAAAAATTTACCAGTTCAGAGCCTAAATCCGATG
GGGTCTTTCAAAGATGCAAACTAAAAAATAAAAACAAACCTTTCGCTGTG
ACGCAATGAAGATACCAAAGTGTCAACTAAACTGAGAGATTTGATACACT
GAACCAATTGAACCAAATTACAATAATTGCTTCTTAAAACATAATTTTTT
ATTACATAAATTCAGAAATTGTTAACGTTTTAAACACGAGCAACGGATTC
ATAATAATTAGATAAATCAAAACAAAAATGGTAGACTAGAGCTGTGAGCA
GAGCTGCGTAGTTGTATTTTAATGACCAGCCAGGTCTTTCATTTGAGGGC
TATGCATGTTAGCCTCCAATGATGCAAGTTACCCAATCTCACGGTAGATG
TTTTGTTTTGAGAGTCCTTGCAATAGCTTATTGTTCAACTTGGAGAGGGA
AGGCCAGGCCCAATTGATTGTTTGGTTTGTGTCCTAAAAGCTTTGAAAAA
TGGGTCGGTTGGTCGGTCGTAGCTAAAATTGGAACCTTTTTTTCATTTTC
CCACCAATAACCTCAATTTTTGAAACTCCACAAGCAATCGTGCAATCCTG
GAATCCAACCGCGATTGTAAAGAAATAGCCTAAAACCCGGATCCATAAAG
GCACGCGCCGCAATCGCAAGATAACTTCTAGTTGGAGATGAAGGCGTTCG
CGACGCGTGCTTAAAGGAATACAGCTGTGACTCTCTGCTTTTAGGTGCTA
AATATTTGTTTTTAAGTACGGGTTACACTGGGACATTTTCTGTGCGCTAA
GTGGGTGTTGTTTATAAAAGAACAGGCATCGAAATAAGGGATAGAAATTT
TTTGATAAGCATGATTTTGCATCCTAAAATGGACCAATTTTCAATTTTTA
GCTTGTAAGTAATCCAAAAACGCATCGCGAATTGCAAAATGCAATACGCT
AATTCGATCCCTGAAAGAATCAAAGCAGTCAGTTAAAAAAGAACCGCAGA
GAAAGTAGTTATCATGTGAAAAGGAGGTAAATTCTTTTTAATTTTTCCGA
CTCCAAGTGAAACACTTTTTCTCAAAAATTTAGAGTTGGTCGGAGGACAC
GAACCAAACTATCAATTGGGCCTGGCCGAATGTTTGTAAACATAGAATTT
TTTTCATAGTAGTTATTTGGGGGGTCGTATTTAGGCAGGGCGGTCGGATC
TAGGACCATTCACGGCAGCCTCCTACAGGCTAGCTCTAAAGCTCTAAAAC
AGCAACTAATAACATGAAAACCAGAATATGATTCTTCAATGGGAATCAAA
ACTATAAAGTGCACTTACAAACATCAATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTACAAACATCAAT
ATGTCAGATCTAACAAAATTAATAACGGCACTGTCATCATTGACAATAAA
ACAAAGGATTTTCTGTCAAGAGTCTTGTAAACATTCACGTAAACATTCCA
ACAACTTCCATCGAAATGATCTGTCACTGCAAGTCTACCATTTTTAATGC
AGTCCGAGGATTGATTTGAGAACGCTTGCAGAACGCTTGTGGCGCGGATG
AAAAACTTTAATCTGTCAATCATCTTCTCAAGCGAAGAGACGCGAAGCGA
TTCTAGCTTTACGATAGTGCCGCAGATCATCAGTGGATAATATTCAATTA
TCATTATCCCTTTATTTTCATTCCTAGAACTTTTGCAAAAAAAAAGAAAA
ATAGAAAAGTTGTATTTATTACAAATCTCCTATGTGGCTTTTTTTTGGAA
ACTGCAAAAAACTGATTTTTGTCCCGCTTTTGCGGGACTTTATCTTAAGT
GCTTGCGTGCAGCATAGGGTACAAAGTCCAAATATGCGTTTCCCGTAATT
TTTGTATGAAGAGCTAGGTCTATATTGTCCTAACTCCCTTCGTTATTTTT
GGTGAAATTTCTAATTCAATGACCAGGGGTCAGTCCTCTTAAGGGATCCT
CGACAAAAAACTTTTAATTTTTTTATCGGCATTGGGCCGATTAGGGGTGG
GGGGTCCAACTGCATACCGATAAAAAAACAAGTATTGGGACAAGACGAAA
ATCCTTTCCGCCACAATTTCTTTCTGATTTCGTCCACAAACTCCATGAAA
GAATGTAATTTCACTTGCTTTCACCGCGCACAAATTTGCAACTTTAAAAA
GTACAGTTTTGAATTAGCTTTAATAACAAAACTCTTTTTCCATTGGCCAG
CCTGCTGCCTTTACCTTCAAAATGTTGCGACTTCATTGCATCTTTTTAAC
TTCTGTTTTGATTAACAATACAATGCGGGTATGAACAAATTCAATGTTAA
AATTTAATAGACAAAAATTCAACGATGACAGGTGGGAAGGCGAGATCAAC
GCGACGGCGGACATGATTGGAGAAAATTGTGTTTGTGATCGAAGAGATAA
TTAAGTTTGTTCAGGTTTGTTTTGAAAATTTTGTCAGATAAGAGCAAGGG
GGGAGGGGGTCTGAAGCATCAGCCCAATGCCAAGAAATTTGAAAGTTTTT
TGTCGAGGACCCCTATCTCCTTTTCAAACTTGAGATATCACATTTTAAAG
TTTTTTGGGAATCCAGTGACGTCATAGGGTCCCTTTATTACCCCCAATAA
AAGTCAACGGTCAATTTATGAATTTCAAATTTTTGCTGTGAATGGTGTGG
CCCATACTCCAAGAGCGCCAAGAGTGCGAAAAAAAAAAAAACGTCAAAAA
ATCTCTAGACATGCACTGCGCGTGCAATCAATTTGAAAACCTAGCAAACA
TGCCCTGAACATGTCCGGGGCAGTTTGGGTCATGTTTAGAACTTGAGACT
TTTTTAGTATATTTTTTAGGCCTTCAGTTTAAGCTTAATTCCTATATCAG
GATTAGATTAGTCTTACCTCTTTTATCTTTCCCTTTACAACAATACAATG
CTAACCCGTTGACACAACACATTGACAAGTAATCCCTGTGAGAGAAGTTT
ATATCGAAACCTGCAACAAAAACAAAAGTGGTCTCTTCTACTGATTGTTT
CCCAAAGCTCCTTCGCAGCTATTTATCAAATTTTGAATAAAAGAAGAACT
TTAAATCTTAAATATTTTCATTTTGAAGAATTGGTGCAAAGAAGTGAAAC
CATGGAAAAGTTTCATTTTTTAATGGTTCAATCGAAATAGAGGATTTGGA
AAACTTTCTATGTTTTTTTTTTTTTGCACAAACCCCTGTAACTATGGGCG
AGCACCCTGTTGCTAAGATGTTGGCTTGAAATCGAAAGTAAAACCACTGA
AAATGAAGGTAAAATCAGCCCTCACTCCAAATCCCGTAATCTTGATATAG
GAGTTTGAGCATAGACTGGCCATAAAGCTTCTCATTTTTCAAGTTTTTTT
TTTTAATTTTTGACCATTGAATTTGTTGTAGTCTAAAAAATGTATCTAAA
TATTATTGATTCATGCTTCAAGTTATCTAAAAGAATATTTTAACTTTCAG
TCCTTACCGAATCATCGATGACTGTGGAGGTGCGTTTGCTATGGGTGCCA
TTGGAGGTGGTTTGTTCTCATTAGTCAAAGGATGGAGAAATGCTCCTGTT
GTGAGTATTCTTTTATACATATCTTTAACATTTCATGAATAATTGACAAA
GCTATTTACAACTAAAAGCTCTAATATTATTATTGCATACTATTGTCAGT
TTTTTAAACTGACTGAAAGAAACTTTGCTGACACAAATATGAAGAAATCC
TTTTGCTCATTCTGCTTTTTCAACATAAGAGATGTGCACTCTTTTCTTTA
TGTGACCGTACAAACGATTCAAAGGGAGAGATTCTTGCCAGAAATTTGCC
AGCTTTGTGTTTTTTTTGCAGTTCGCATGTTCTTTGTTTGGTGTAGTCAG
CAATGTAATAACACTAACTGGCAAATTGCTGGCTGACATAGGGTCGGAAA
AGTGTCGGTAAAAAATGTAATCTAATTTTCTTTGCTGCTGGAAAATTGCC
AGCTATTTTTCTTTCTTGCCGGCAAATTGCCAGATATTTTCGTTTGTTAC
CAGCAAATTGCCATCTATTTTTCTTTGTTACTGGCAGATTGCCGGCAAAA
GTCTCCCCTTGGGCCAAACCCTTTTCTAAAAAACAAGTTTACACAAATAT
TGCTGGCAAACTGTCTACTGGCTTATTGCGGGCTGTAATTGATAGAATGC
CAGACTCAACAGGAGTCTTTCAACAGAATTTTTTGTTATCTTAATAATAT
AAGGCTATGTTTCAGAAAAGAGTATTCATATTTTTTGATTGGCTTCCTTT
CTTTAGGGCACCAGAATGAAGGGAAGTATCGCAGCAGTGAAGACGCGTGC
CCCTGTTCTTGGAGGTTTGTTTCCTTTTGATACAGTGGAGTCTTCTTTAC
TCGGACCTCTATAGCAAAAGGTCTCCTTAACTTAACTTGAACGAGTTTTT
GGTACCTTCAGTTAATAATGCCTTATAAGCCTCACTCAAACAAATTTGTG
TTCACCATCCTCTGTTTTTTCTAAGCTACTACAACTACGATCATGTTCAA
AAATAGTGTGACATTTAGTGAACTCAAAAATTGAAAAAAATATAGTATTT
CTTGAATACCTCGAGAAATATTTCATATTTTATATTATGATCGGTATTTA
CACAAAAGAACATATTTTGATGAAAAAAATGCTAAAATGTGTGGCTCCAG
GTCCAAATATGTCCAAATAAGTGTTTTGTCGGCCACCTCAAAGGAGGAAA
TGGTTTGTTTGAAAATGACACTTAAACGGTAACTAGAGGTATCATATTAT
CTCAAAACAGATAAAAGAGCAAAATTTTGAGACTGGTTGGCCACCAGTGT
TGTCAGCCACATAAACGACTCATAGCTTATCTTGAAATATCTTGTTTAAC
CCAGTAAGCCACTTAATTTCGCTCCAAAACAATTGGAAAGGTTAATCATT
CTACTTATCCTTGGTGAAAAAATAAACTGTTAGCCACGAAAAATACTCAT
TTTATTAACATAATTGTCAGCCACTTTGAAAATGTCACAAAACAGGCCTT
TATTTTTGAACACGATCCTACATGGTATAAATTTGAGAGTTTCTTCTTGA
TACCTCTGAGAAATCATTGTCAGAAGTATAGACGTAAAATAGGGTGACTC
TATTTGAAGTGCGTGCTATTTTCAACTTTCCTGTCAACTTCGGGTATGGT
TTCTTTTCAAAACTTACTGAAAACCTTTTTGGTTTTTTGCTTAGATCTGT
TAACTTTTTATTCCAGGCAATTTTGCTGTATGGGGTGGTATGTTTTCAAC
ATTTGATTGTTGTCTTATGTATGTACGTGGTAAAGAGGATCCTTGGAATT
CCATTGGTAGTGGTGCACTGACAGGTGCTGTACTCATGGCTAGAGGTATA
ATAACTATTTTCATTACTTAGAAATATTGGAAAATGGTATAATCGAAGCT
GATCTCTCTTCCTCTAAGCAGCTTTGTAGATTACGCCTGACAGGTTTTAT
GTGGTTTCTATAATTATAACCCTTTTCAAAATGCATTTTCTTTTTGTTAC
TTCTGTGAGATTGATATAAGTATTGCTTTTATACAATGTCAATAAGCAAA
GGTACTGCTTTAACTTTAAAAAAAATAAAAACATTAAATTACCTATAATT
ACCTATTACATATAATTTTGGTGTATTCCAGCTGATAGCATTATGTTTAC
AAATTGTTTTTTCAATATCTAGCTGGACCTGGTGCAATGGCTCGTTCAGC
AGCAGTGGGTGGTATCTTACTTGGTCTCATCGAGGGAGTTGGTATCCTCA
TTACCAAAATGACCGCAGAACAGTTCAAACCAGGTTAGTAGATGATACAT
TTTATGTTCTATTCAAGATTTAATAATCATTTTTCAAAATTAGTCCATCC
TTGTTATACTCTGTTTTTCTCTCTTAAACTTTTTGTCTCCCTATTTTTTT
CGTTTGACTACTGTGAATCTAAATGGCTTACTACCTAAACTTGGGACTAA
CTATAAGAAGAAATTCATATCTTCAAGGACCTCAATGACCTTGCATTCGA
CACACATAGTGCCAAACTAACAGGTGTTATCCATGGTTATATTTTATGCT
TTTATATCTAGTTATGCCACAAATGCCAGCAGATCCCGCCCAGCTTCCGC
CACCACCCACCAAACCATCGCCCCCGCCTCCAGATGCAACAAGTGGTGGC
CAGCCTACTTTTCAATGATGTGTTGAATTAGCATAATGAGAAGGAAATGT
CAATGTAAGAATATTATTTGTGTAATTGTACACTTGCTCTNCCACAGTGA
GAAGAAAATGTCAATGTAAGAATATTTGTGTAATTGTACACTTGCTCTCT
GTATTTTTCTTTCAACGTTACTAGACGAGTGGCACCATATAAGAAACAAA
CTATGAGTTACGGCGCCCCTTATCTCCTTGTTGGCAAATATTTTAGGTGA
CCCCTAAGCCAATGACTCGTCAATTTTTTTGTTGAAAATCCATTGTGTTT
CATGAAAGATATGTTTTACAAACAATCAAGCAAATACAACAGTTCTGAGA
CATTTTTTTAGACATTCCATGGTGTAGCTTATGATAAAACAAAATCAAGC
TCATAAAAAAATCATAGAATCCAGCCCACGTCTATTTTTCGAGGTTTTAG
GGATGTCAAGAAAGGGGATCAGATGTGAAAACTGCAGTGCTTATAATTTT
ACTAACCACAGTACCTTGTTATAATTCAAGTTTCTATAATTTAGATCTTA
TGTTTTGCAGGCTGGATGTTGTCAAAAAAGGAAAATGATAATCACAATAA
GATGCTATTGAATTGCAAATTATGCTTGGTTCAACAAAAGAGTGTTGTCA
ATTGGTGGTATGTTATTATTGATGTTCCTTTTGATGATGGTTGGATGAAT
TCAGCTTTGTTAATCGCCAAGAGAGGTTTTCTGGCGAAGCAACCATGCAA
GAAAAAAGCTTGAATGAAAGTGGATTTTTATGTTAGAGGTGTTTTCAGAG
GAAGCAGGTTTTCTGACAGTACTTTTCAAGGATTAAAAGTGCATTTTATT
TGTCTGTAAATGTTGCTATGACCACTTGGGTATTTAGTATCAAAAGAGAA
CTGATTTTGCAATGTAACTCTAATGTTTGAAAAGGATGAATATTTGTTGC
GAGAATAATCCAAACTACTTGAATTTAATTAGACAGTCTGAACAACCGAG
ATACCTGAACTTGAGACTACTGTCCAGAAAATCTGCTTGGGGTTGAAACG
CTTCAGGTTTCCCAGCCTTCCACCGAAATTGTTTTAGAATTTTTATAAAA
CGTAGATATAAATTTTATATATTTTTTGTCAACAAAATGGATAATGAGAA
AATTTACTCCCTTAGAAAAATAGAAATCTCTTAATTGTTTTTTTTCGCCA
ACTATTTTAGCTGAATATTGAACAAATCCGGTCTAAGTCTAAATCTAATA
GAACTTTATTCCAATAATCGCACGATGAGTTATTTTTTCTTCTTTGGCGC
GGCTTCAAAGAGAGCAATTAATCGTTAATTGCATCCTGTAGAGAGCAATT
AATCGTTAATCACACTCTCCAATGCTGCGCCAATGTTTACAAAATTGATT
TTGATGTTTTTTCTTACATTTCTTTGCATCGAACGTTTTAATTGCATTCG
AAATTTATTTTGTGAGAAAGAAAATCAATAAACAACAATAAAAGAAAGAC
ATAAAAAGAAGAGACAAATATAAAACTCTCAGTGTAATTTCTGTAATTTA
CTTTCCTAACTGGGAAAAAGTAGTGAAAGCCATTGTGCGATTAGCTCGTA
ATCACATAATAACTCNACTTGAGACTACTGTCCAGAAAATCTGCTTGGGG
TTGAAACGCTTCAGGTTTCCCAGCCTTCCACCGAAATTGTTTTAGAATTT
TTATAAAACGTAGATATAAATTTTATATATTTTTTGTCAACAAAATGGAT
AATGAGAAAATTTACTCCCTTAGAAAAATAGAAATCTCTTAATTGTTTTT
TTTCGCCAACTATTTTAGCTGAATATTGAACAAATCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032687XLOC_032687Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051636-exon-scaffold_202-1575043694:561359..561856TCONS_00051636-exon-scaffold_202-1575043694:561359..561856Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1575043694:556457..556556TCONS_00051636-exon-scaffold_202-1575043694:556457..556556Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1575043694:555693..555750TCONS_00051636-exon-scaffold_202-1575043694:555693..555750Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1575043694:554662..554790TCONS_00051636-exon-scaffold_202-1575043694:554662..554790Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1575043694:554224..554334TCONS_00051636-exon-scaffold_202-1575043694:554224..554334Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1575043694:553742..553945TCONS_00051636-exon-scaffold_202-1575043694:553742..553945Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1575043694:552019..553296TCONS_00051636-exon-scaffold_202-1575043694:552019..553296Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:561359..561856TCONS_00051636-exon-scaffold_202-1510915933:561359..561856Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:556457..556556TCONS_00051636-exon-scaffold_202-1510915933:556457..556556Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:555693..555750TCONS_00051636-exon-scaffold_202-1510915933:555693..555750Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:554662..554790TCONS_00051636-exon-scaffold_202-1510915933:554662..554790Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:554224..554334TCONS_00051636-exon-scaffold_202-1510915933:554224..554334Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:553742..553945TCONS_00051636-exon-scaffold_202-1510915933:553742..553945Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1510915933:552019..553296TCONS_00051636-exon-scaffold_202-1510915933:552019..553296Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:561359..561856TCONS_00051636-exon-scaffold_202-1491911889:561359..561856Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:556457..556556TCONS_00051636-exon-scaffold_202-1491911889:556457..556556Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:555693..555750TCONS_00051636-exon-scaffold_202-1491911889:555693..555750Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:554662..554790TCONS_00051636-exon-scaffold_202-1491911889:554662..554790Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:554224..554334TCONS_00051636-exon-scaffold_202-1491911889:554224..554334Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:553742..553945TCONS_00051636-exon-scaffold_202-1491911889:553742..553945Clytia hemisphaericaexon
TCONS_00051636-exon-scaffold_202-1491911889:552019..553296TCONS_00051636-exon-scaffold_202-1491911889:552019..553296Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:552019..561856 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	4.22396	4.05567	3.58906	4.78201	4.53811	5.53609	6.67621	4.72637	11.3272	9.79968	0	0	0	0.0979431	0	0	0	0	0	0	10.4361	11.2256	0	0	0	0
Blast
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BLAST of TCONS_00051636 vs. Swiss-Prot (Human)
Match: TI17A (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Homo sapiens GN=TIMM17A PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.256e-42
Identity = 98/141 (69.50%), Postives = 117/141 (82.98%), Query Frame = 2 
Query:  473 MEEYAREPCPYRIIDDCXXXXXXXXXXXXLFSLVKGWRNAPVGT--RMKGSIAAVKTRAPVLGGNFAVWGGMFSTFDCCLMYVRGKEDPWNSIGSGALTGAVLMARAGPGAMARSAAXXXXXXXXXXXXXXXXTKMTAEQF 889
            MEEYAREPCP+RI+DDCGGAF MG IGGG+F  +KG+RN+PVG   R++GS+ A+KTRAP LGG+FAVWGG+FS  DC ++ VRGKEDPWNSI SGALTGA+L AR GP AM  SAA+GGILL LIEG GIL+T+  + QF
Sbjct:    1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASAQF 141
The following BLAST results are available for this feature:
BLAST of TCONS_00051636 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TI17A2.256e-4269.50Mitochondrial import inner membrane translocase su... [more]
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