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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051593 ID=TCONS_00051593|Name=TCONS_00051593|organism=Clytia hemisphaerica|type=transcript|length=736bp
ATCATTGTAAGGTTGCGACTTTTCCTTTTAGTTTCTAGGGTTTTCCATTC
TAAATCGTTCAATATTCTCGTTGGGCTGGGAGTGATGGTTCTAGTCAGCA
TAAACAAAGCGAGCAGATTTCCTTTGTATCGTTTCAATTCGGTCTCGCAG
TCCCTGATTGCTCTCTCCGATAGGGTTCCAGACAGTAGATGCGTAGTTGA
GAATTAGGTTTATGTACGTCTTACAGGCTTTTGATTTTGGTGGCTTTGGT
GCATCCTCTCAGATTTCGCTGTAAGAAGTTTCGTATTTGTGTACCTTTTT
TGCAAACCATATCAATGTGTGTATTCCATTTCAAGCGTTTGTTAATAATG
ACACCAAGATATTTGGCATTGTCGACACTTTCAAGAATCACATTGTGAAT
GGTGTAGTTAGCGAGAAATGGTTTTGTTTTATTAGTTATACGCAAAAGTT
AAGTCTTCCCATATTCGGAGGTTATTTAAGTCGTTTTGTAAAGTTATTAT
GTCTTCAAGTGAAGATATGGTTCGGTAGAGATAAGAATCATCTGAAAATA
ATCGTATCTTGGAATCAACACATAGCGGAAGGTCATTGATGTATACGAGG
AATAATAAAGGACCCAATACTATTTCTTGCGGGACTCCTGACTTGACTTC
GGCAAACTTTAATGTTTTACCAGCATTGACCACAACTTGTTGTGTTCGAT
TCCAAAGGAATGATTTTATCCAAGATAGGTGACTAC Run BLAST on NCBI transcript from alignment at scaffold_202:80402..81195- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051593 ID=TCONS_00051593|Name=TCONS_00051593|organism=Clytia hemisphaerica|type=transcript|length=794bp|location=Sequence derived from alignment at scaffold_202:80402..81195- (Clytia hemisphaerica)
ATCATTGTAAGGTTGCGACTTTTCCTTTTAGTTTCTAGGGTTTTCCATTC
TAAATCGTTCAATATTCTCGTTGGGCTGGGAGTGATGGTTCTAGTCAGCA
TAAACAAAGCGAGCAGATTTCCTTTGTATCGTTTCAATTCGGTCTCGCAG
TCCCTGATTGCTCTCTCCGATAGGGTTCCAGACAGTAGATGCGTAGTTGA
GAATTAGGTTTATGTACGTCTTACAGGCTTTTGATTTTGGTGGCTTTGGT
GCATCCTCTCAGATTTCGCTGTAAGAAGTTTCGTATTTGTGTACCTTTTT
TGCAAACCATATCAATGTGTGTATTCCATTTCAAGCGTTTGTTAATAATG
ACACCAAGATATTTGGCATTGTCGACACTTTCAAGAATCACATTGTGAAT
GGTGTAGTCAGCGAGAAATGGTTTTGTTTTATNCACTTTCAAGAATCACA
TTGTGAATGGTGTAGTTAGCGAGAAATGGTTTTGTTTTATTAGTTATACG
CAAAAGTTAAGTCTTCCCATATTCGGAGGTTATTTAAGTCGTTTTGTAAA
GTTATTATGTCTTCAAGTGAAGATATGGTTCGGTAGAGATAAGAATCATC
TGAAAATAATCGTATCTTGGAATCAACACATAGCGGAAGGTCATTGATGT
ATACGAGGAATAATAAAGGACCCAATACTATTTCTTGCGGGACTCCTGAC
TTGACTTCGGCAAACTTTAATGTTTTACCAGCATTGACCACAACTTGTTG
TGTTCGATTCCAAAGGAATGATTTTATCCAAGATAGGTGACTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051593-exon-scaffold_202-1575043694:80805..81195 | TCONS_00051593-exon-scaffold_202-1575043694:80805..81195 | Clytia hemisphaerica | exon |
| TCONS_00051593-exon-scaffold_202-1575043694:80402..80746 | TCONS_00051593-exon-scaffold_202-1575043694:80402..80746 | Clytia hemisphaerica | exon |
| TCONS_00051593-exon-scaffold_202-1510915933:80805..81195 | TCONS_00051593-exon-scaffold_202-1510915933:80805..81195 | Clytia hemisphaerica | exon |
| TCONS_00051593-exon-scaffold_202-1510915933:80402..80746 | TCONS_00051593-exon-scaffold_202-1510915933:80402..80746 | Clytia hemisphaerica | exon |
| TCONS_00051593-exon-scaffold_202-1491911889:80805..81195 | TCONS_00051593-exon-scaffold_202-1491911889:80805..81195 | Clytia hemisphaerica | exon |
| TCONS_00051593-exon-scaffold_202-1491911889:80402..80746 | TCONS_00051593-exon-scaffold_202-1491911889:80402..80746 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:80402..81195 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR000477 | RT_dom |
Blast
The following BLAST results are available for this feature:
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