TCONS_00051486 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00051486
Unique Name	TCONS_00051486
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1375

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_202:217656..238532+

transcript sequence

>TCONS_00051486 ID=TCONS_00051486|Name=TCONS_00051486|organism=Clytia hemisphaerica|type=transcript|length=1375bp
CACGACGCCCCCCGGGGccttctttgaaaaatctttattaCGTAATCTTT
TGCATCAGTTTTCTGGacgccattttgaaagaaacatGTGAAAAACTTTG
GCCTCGTGAAAGTTCTGGAAGAAACAAAGATTGCTGAGATTTATAAAAGA
AACAAcagaaaattaaaataaaataaaaacaaaatgtcaTTGGCAGCATC
AAACAGACTTTTCAACATTCTGAGAATCACGACAAGACATTCACCAAACA
AATTGCAATTTTATCGAGGCTTGTTGGTAAATACAACATTGAGAAGTGAA
AGTGCGGCCAAGGAAGAAGAACCGAGTTCAGAGCAcgaaaaaattttggc
tgagaAAACCAAAGAGATTGAAGATGCCAAGAAAGAGGCTGGAGATTTTA
AGGATAAGTATATGAGAGCGCTGGCCGAGAACGAAAACATCATGAAACGT
AACCAAAAATTTTTAGCTGATGCTAAATTATACGCCGTTCAAAGTTTCTC
TAAAGATTTGTTGGATATTTCAGATGTCTTGGAGAAAGCAACGGAAAGCG
TTTCACAGGAAGAACTCAAAGCCAATAAGGAGCTGAATGATCTATACCAA
GGGTTAACTATGACATATACGGAGCTTCATAAAGTTTTTGTTAAACACGG
ACTCGAAAAGGAAGATCCATTAGGACAGAAATTCGATCCTAATTTTCACG
AAGCCGTCTTTCAGATGCCTGACCCTCAAAAGGAGAAAGGCTCAGTTGCA
GTGGTACAAAAAGTCGGGTACCGGCTCCACGGGCGAACACTACGTCCTGC
TATAGTGGGCGTCGTTCAATAAATAGAACCTTTTACAGATTATTTTTTGG
TGCAAATTTTATATGTTATTGTTTTACAGCAATGTGATACTCCGAGATGG
ACGATTTTGTGCTCAAGTTTCCATTCGAAATCGTTTGGCTAGCACACATC
TTTTTCCCGCTCGTAAAGTCAAGATAGCGATTTAATTTTGCATTTAACTT
TTAGAAGTTCAGGTTTTTAAATAAAGTTGTTTGCTTATACATTTTTGCAA
GAGAAGACATCAGCGACTTGCTGATtcgattttttacaaaatacgaatta
tttaaaaaacctcaaaaattaTTTCCCACAAGTGAAATCTGATGAAGTCA
TCATTACCGTTAGACGAATTTGAGAGAGTTTAGGTGGTACCATAATCTTG
CTTTTGCTTTTGTAGAAGTATTTGTAGAAATTATAATAATAtctttatac
tttttattttgcaaCTTGGATAGAATGTTTATAAGTTTTCGATAAATTTA
ATTTAGTCTTATCTGAAGATGTCGAATAATTTAATTCTACCAAAGGATAG
ATAGCCTTGAATTTATTTTCCTTCT

Run BLAST on NCBI

transcript from alignment at scaffold_202:217656..238532+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00051486 ID=TCONS_00051486|Name=TCONS_00051486|organism=Clytia hemisphaerica|type=transcript|length=20877bp|location=Sequence derived from alignment at scaffold_202:217656..238532+ (Clytia hemisphaerica)
CACGACGCCCCCCGGGGccttctttgaaaaatctttattaCGTAATCTTT
TGCATCAGTTTTCTGGacgccattttgaaagaaacatGTGAAAAACTTTG
GCCTCGTGAAAGTTCTGGAAGAAACAAAGATTGCTGAGATTTGTAAGTTC
TTTCCTTACCATTATATTCCTATTTGCGATTAAATAAAAGACAGAGTAGC
TCAGTGGCATTTTTATTGGCAATTTTAGTGGCAATCTCTCTTTATGGTAC
CGTGAGAtttggtaacttgcatcagtggaggctaacatgcatagccctcc
aaatgaaagacctggctggtcattaaaatacaaagttttaaaaatcaaaa
caaaaatggtacagtagagctgcgagcggagctgtgtagttgtattttaa
tgaccagccaggtcattcatttaagggctatgcatgttagcctccactga
tgcaagttacccaatctcacggtataccGTGAAGCTGGGTAACTTGCAGT
TGGGAGCGAGGCCAGTTTGCAAAAGCATCCAGCGAGGTTGCAGAGTATGG
CAGAAATCATATCGAAATCTCGGGGgcagaatagacctttttttaaagag
gcagccatgttgaataattatgtactccagcataaaaacaatgatacagc
catgtataattactgtatcatgcatatttaacaaattatgcatggctgta
tcattgtttttatgctggagtacataattattcgacatggctgcctcttt
aaaaaaaggtctatgtgTAGGGCaggggcaaatttttgataatctCTGGT
CTCGGGCAAAATGACTTAAAATACACCGTTTAAGTtaacagtgtcgactg
cgcacgcgtatgaacTAAGCACAAGTGTTACACGTAAAGCCAAaacgcgt
attacgaacaacctctaaattgccgagtacaggagaaaaaaaatcgaaat
tcaaaatggcggccaagcccacgctgataactatcaaaaatcttcgtttt
tcattcagCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGGCGTGATATC
AGGCGGAGACAAAACGCCCTCATCGTAAGATTCTCGGGTCgtcttattgt
ttgttccttttgtcgagtctgtcggtcctattgttcatgctgaatccata
cacgatgacgtcaatgtttggcggcatacctgaaaataaaaacaaaaaga
ttatatTTATCATATCatttttgcatgaattacgctaccttatacgtcat
tataaaattatacaaaacgaaaGGGAGTCTAGGTCGCCCGCCTAGAGCGC
Gggccctaatattttttctctcgcggtcttcaggggaaaacgaaagtgat
ggatattcttcgaaggaagaatttgccaaacaaacccctagacaaaaaga
tgtattttgaggttgggaatggatcctgcgaagatgaaaaaattttgact
aggcgtttttttggcaaagccaaaaactctaattttttttttccctcaag
ctaaaaaggttacgggttttgggcaatcgaggaaaaaatcagcaaaaagc
tggtgttttccgtAAATCTGAGAATCGCGATAAGACCCTCACtggctatt
gcagctcaataaatcaatgaaatattttgaaataaaaagtaaacaaacct
tgaacctttcatgatgaatccaaataaataaagattacatttcaaaataa
aacgatttccaaaccaacctaaagtcagtgtctgccaactaaaaacttat
ctgcggggtcactgacaaggagttacgacttcagactttagattccaatt
cttgtataggctgcaactacactgccaaatgatctgtattacaaagactt
ccaaatgggtccataagttaagaaaatgagattatcatataacacagggg
ttctgtttttaaaaacaaacttcaaaataaaattgttaatgaacttgtta
tttacagttaggaacatttggcgagttcctgtacacggccgcaatcaaaa
aaatcataacatcactcattaaaaaatggcgttcgtgtcttttcgcattT
TTTCTAGCCTAGACGATCTANttagtgagattgaccattttgttgtttag
atttgagcgggcaaaatttctgtacaaaccaaaatatggcttcgttggaa
taccggttgaaacacttgtgtaaGATGTTTAAACCAAATCCAGAATGGGC
AAAGGTAGTCTAAATAGATTATGATAGgtgccgtggtatagtggtagtcg
accttggcttctgtgcaggaggccagggttcgattcccactcacggcagt
tcacttggcaagtgaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACTGaaggtaagcacataagatattcttataattaatgatattca
ttgaaacacgcttcgttgtgcgctgcggtggagtgcatgatgtaactcgc
gcggcaattaactcgccttctgttggaagatcatatcgGGCGTTTTGGCG
TTGCCACCCTCAAAGCAGCGGNacgggacgctcattagtaagcgtctata
gttgcgagaataggcctctaaagcctcctgcaactcaaccaaatagaaat
agaaatagaaatgacGCCCCTCAAAACAACATCACAAATGATGAtgcgca
cgcgtatgaacaNcttaacaatagatccaaaagggcgccataatcttgga
agataatttgttttggtctccggctttgggaagtagcaatgtttttggtt
gttttcgatggaagatggtaagaaacttaagttacaagtgtcatttagtt
tttgctggcttgtagaatggcaggatcctgaatggtttccctaactgNaa
acatccagttctcataagaaaacccagcagagaaatggtaggtaaagaac
tccttttaatcataacttcttttcctctagatgaatttttttgaaatttt
caggagagatacataaaattgtcattaatatcatgttcaaatatcttaaa
aattctctttaaaggaaagaaaaaaaatggaaatgtttacatttctctaa
ccttccacagtactaaagtgagtatttttacctaccgcttctacggtgga
gatggcgaaactgttaaacggtgtattggcCAATTttgtccagacgatct
caatcgaacagaatcgacgatcgaaccaaatcgaacgcaatcgaccgatt
gaaattcaattgtggaacgcaatcgaatctcaatcgaatgtcaaaattct
gggtaatattcgattggttcgattgttgttcgactggttcgatcttcgat
tccgttcgattgagatcgtctggctttattcttgcagcttcccaacatcc
caGCCACaggtgttacgcgtaagccaaatcgcgtattacgaacaacctct
aaattgccgagtacaagagaagaaaaatcgaaattcaaaatggcggccaa
gcccacgctgataactatcaaaaatcttcgtttttcaatcagctattgca
gctcaataaatcaatgaaataatttNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggctgcaactacactgcca
gatgatctgtattacaaagacttccaaatgggtccataagttaagaaaat
gagattatcatatagcacgggggttttgtttttagaaacaaacttcaaaa
taacatTGTTAATGAAGttcttacttaaaatatcacttacttacataatt
tatttatgatataacacccttttcttaaataaatggcctcttaaagtctt
ttatgtttgccgaaAGAAGGGAGAaacatttaatttgacccccggttttt
cctctttttttctaGCTAATTTTCGCgcgttagtgtagacacaactttaa
tccggggaaatgaagcgttttcattggtctaaaatcacggatggtcacgt
gaccagaatttttatccagggaaatgccgtNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtttagtgagattgaccattttgtt
gtttagatttgagcgggcgaaatttctgtacaaaccaaaatatggctttg
ttggaataccggttgaaacacttgtgcagctctcaaacatcacaagctga
atgaaattactttcgatttcccgtagaaattatgcgatgaacaatccggg
ggtcaatgaattgacgatcgaacgcaatcgaacgcaatcgaacatcaatc
aaacgcaatcgaatatcaatcgaatctgaaaattgcggtaatattcgatt
gagattcgattgcgttcgacaatcgaatttcaatcggtcgattgcattcg
atttgtttcgactggttcgatcgtcgattctgttcgattgagattgtctg
gttttgttactttttctggGTTTTTAGCAGCCTTTTCTGGGTCCCATAAT
TTTcttaggaccctgccgacgcaccggactttaacgaacaccggacacgc
gaaagtctggtgtaaaatgataattttttttaccaccggacaatctttAC
ACCGGACTTATGGAAGTCGGATATCCGGTGACGGAGAAGGATAATTTTTT
CCACCAAACAATCAAAAcacggacatgaccagtccggtgcgtccagtgtt
tcttaattttttgtttcataaatgtccggcgtccaaaattccctgtattt
aacaccggactgacactggacttattgcgtccggtgtagcgaaaggatac
tttttgccacgggacaaatacaccggacagtccggtgcgtcagcAGGGTC
ctattttcttacgtgcacggtaaacctctgaaggcacttgaaaattatac
atctgaggggaaaatagtcctcccgcggaaaattttacaacaagaatctt
gttgtgcgccagaaagtcaaaaactgatacagcgccctattcataaacac
aatcacgtaactttgttgtcatccccagtccttttagacgaacggggtcc
ttacgatttcgagattgcatattcgtctgattgtatgttttcacccatcc
ctttagagcttcagcgtggtgggcagtaaacaaccacaatctgatctcag
gttatttTGGGTGggttagcaactccagaagatttttcaaatttcaattt
ctttttctcaaaacctatcctatcttgtagagctttgaaaaagaaagaaa
atgaggggtcataggcctccaggataagtggttgtaaagatattcaaatt
ttagtgtcaaaaatttgactaaaaatgtcaaaaaaaaagttaggaaaata
gcttggaaaaattattaaaatgtgtcaaaaaagaaaaaaaagatatttcc
cAGTCAGGCTTCTTTAATTTTGCAtgtctctttttctagtgtagctagag
acctgaaATTTGGAGGGAGAATTCTTTGATGgtgttagaatattattata
taaaaatatttgtaaaatatttagtatatttatgaaaataacgaaagata
tatctttttttgaaaaaagaagacattgcattgttttttttttgtttttg
aagaaaattagcttggaaaaggttgaaatgagtctaaaaaggcgatagga
cccattttcaagggtcccctggaaatggaggaacgaaaagttataaataa
agaataagttaatctgaaaggagaaaccccaaatgaaaaaaaaatccatt
ttggcagaaatataaaataaataaagaataagTTAATCTGAAAGGAgcaa
ccccaaatgaaaagaaaatccatttcggcagaaatataaactttttttgg
gacattcccatgctaaagaagcaaaaataaaaaagttaaaaaaactacat
aaaaatgaaaaaactaaaattagcgattgtgatttttgaattcctcacct
tttttctgataaacatacaaagtcaagtacattttcctccatttccagaa
acatttgttcatCGATAGTTGCAACTTATTTTTCTCCCGTCGAAAAACAA
TTctgaaaatgttgcaaaaactTTCGGCACTTTACCAATTTGCCTTCTAG
CCCgagtccacagtgttatatactgctggaaagctaagatcacaggcttt
cttttagtaaaaaccggaatgctttagcatacatagaaaacaAATTCGAA
GgattcaaagttcacggaaaaatgaaacatttggtttgacgtcaaggAAA
GTTGCCTgacttctggagttgctagGTGGGTACACAAAGTTTAAGGGCAG
GATTTCAATGGTATAATTTTTCCTTGGGGGCAGCcatgacatgctctgaa
aactgggagcgagggaaacttgcatagccatcatatgaatgaccaatcaa
agcagtaaaattttaaaacaagtgAACTTCAGTACGCAGCTCCGCATTTT
Tgctttgatttaactttgtattttaatggccagccaggtcattcatttga
gggctatgcatgttatccTCCACAGATGCAAATTACcggttacccgactt
cacgaNACAGAGTTTTATGTTGTTGGAAATTTCCTTGGGGGCAACCATGA
CATGCTCtgagttacccgacttcacggtatcagtaaaagttattgtgaca
tgttatgacagaaagtatgattgataaacttggtggagtagttatcaaaa
caaattagttgtcaaagagatttaacagtaagtaaaAATCCAGGGGGGAC
CCCCGTACccgtactagggttgcgagctgacgggggagggggtgccgccc
gactttcgaactttggacccttaccgggactaaaaaaggACTAAAGTTTT
TGTGCGCTTCCGTGCGATCAAAATATTGCACTTTGTGACACACTGTTTAT
TTTGTTCAATCGCAAACGCTTGTGAAAGCGCCAAATATTTTATCATCCAA
TCACAGCAATATCAATTGTTTTGTTGTCAAAAAATTGCCTTACAATTGTA
TAAAAAGTATCCAATCAAATGAAGGTAAAAGCGCTTTCATCCAATCGTaa
caaattctttgaaaaaataccttaagggaattaattttaatttgatagga
tattacaaaataaaatcagTAATATTGGATTGGCTCATTAATTGGctgta
atttttttctccatagaTTAGTACTTTTTATAAATATGGAAGATTTACCT
TTTGAGTTACTTTCCAAAATATTTAGCTTCTGTGGAAGTAAAGATTTGAA
GTTGTTGGCATGCTgtaattctttttataaaaatactgtGTGCTCTGTTC
TTTGGCATAGTGTGTGTTTACCAGTAAACTCATATGAGGAACTTAAATGT
AAACCTCTGACAAATCTCTGTCACACCAGAAGGTTAACATTTATTGCTGA
CACATTCACAACCAATCAAGACTGtcagaaaagtttgaaattagtcTTAC
CATTTTGCAAAGAAAGTATTGATGTTTTATGCCTGAGTTTAATTTATCTC
GAGGATGGTACCTCACTAGCACTGTCCCATTTTGATCAaatcaacatgct
ccattttgaTCGGTGCTACCTAAAAGATGGCAAATCATTATCTAAAGTGC
caatttttaataaattgaaattcaaaaatgctGATTTGGACAACCAATGG
CAAGAGACTGATGATATAGATGATTGTAGTGGTTTAAAACGAATATTGAA
TGGTCAAAATAAAGTTACTGAGGTTTACATTGAGGAAGGATGGTTTGTTA
ACTCTGCATCACTCAAGATCCTTGGCAGAATAAGCACCTTAACTAAGCTG
GAGCTTTGTTGTCATAACAGGGCTCATCACTCAGATCCTGAAACCTGTTT
TGACTTTAGACCACTTCATATGTTGGTAAAGCTGAATTATCTAAAATTTG
AGTGTTGTTATATTTCTGATGTATCATTAAAGAAACTCTGTGAAAACCTT
GTTAATTTGCAAGTGCTTTTGTTTGATGAATCATCATTTGAAGATGGTGG
AATGGAAAGCGTGTATATGCTNTTGTTAATTTGCAAGTGCTTTTGTTTGA
TGAATCATCATTTGAAGATGGTGGAATGGAAAGCTTGTATATGcttaaaa
atttgacaaaattggAGATATTGCCTCCACGGTATCACTATATGACAACA
CTATTTTTCAAATACTTTACACCTGTCATGGTTTTGAAAGAAATTACTTT
TAATCATTCAATGTGCAATTTCAAAGAAGCAAAAATTCAAGTCGGGCAAT
TAAATTGTATTTCTACCTTGAGGAAGATAACAATATACAGCCCAAAAGAA
AGTATTCATGAAATTACCCAGGAGCTTTCTTCTGATTGGGAGTTGTCAGA
CTGCAGAGAATCTTTGCGATCGCTTGGTAACAGCATTGGAAAAGAATACA
TTTATACCTTTGTCTCATGAATAAAGTTTACTTCTTTTTAACTAAAAGTC
CCTTTAGCATTTGTAACGAAATGTAACTAAAgtagttttcaagaaaaata
ctTTTCTATCAGCAAATTGATATGTATCAAGAATAATTTTCATAAGCATG
AAAGGCTTCATTTCTAAATGAGaatcttgaaaattgaaatgtaCTCGACC
ATTTCGAGAGAATGTTTGccttgttttctattttcttacttgtatttatt
ggacctacctccgggtaccccggtggaggttctataaattaacccatgtc
cgtccgtccgtctgtccgtctgttaccagcttttctcaggattggctcat
tagttttttctgattttatgccggaaaattcttattcgccttaaaaaaca
gattttcgtattttaggggaaattccctttaaccaaataagaaaatatag
cttttctcaatgttgactcatgatttttttctgattttttgcaccatgat
gcaaaatggcaatgcctaaaatgttttggagcccgattttcgaaaaaata
tatatatttgggcaaatttgggccaaaaactgcctaaaaatagggttatt
tggactttgtccaaaatcctgtcattacttttttctgattttttgtacaa
agatggagggcaagattctctaaagaatggctgaagtggtttttcctgga
aaattcttattcgccttaaaaaatggattttttgtATTCCCTTTAACNtt
tggggaaattccctttaaccaaataagaaaatatagcttttctcaatgtt
gactcataatttttttctgattttttgcacaatgatgcaaaatggcaatg
ccttaaatgtgacggagccagatttttaaggaaattttttttgggcaaat
ttgggccaaaaacaacttgaaaggttttttgggcctgaatggtttaagtg
attttcgtatttggggaaattcctttttaccattttacattattcaacac
acaagctttatttttggacctacctaaggtagtcctttaaattaaccctt
gtccgttcgttcgttcgttcgtccgttcgttcgttcgttcgttcgtctgt
tgccagcttttctcgggatcggctcattagttttttctaattttctgcac
gatgatgcaaaatggaaatgcccaaaatgtgacggagcccgattttcgta
aaaacaattttccggccgaaaatggcggaaatatgccggaaaaactggtt
tttcggcattttctcgagatttcatcattagttttttctgattttttttc
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNcgtttttgcagattttcattggattttttcc
ttgtatttctatgtttttcacacaaaaacattattgataacaatgctcac
catcaagcatgattcaacaattgtcaaaaaaactgatttttgcgaccaga
acttcctatttatttttcccctacaacccttctctctccccccatcaaca
atcaatgatgaatttattgtgttgtgtattttcgctaaatgctatatttt
ctgactgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCTtgttccattctgaatttttg
tacaattattgtcacttttttcttattttcatctgatgttaatcattagg
taggtccattcagcatgttgcttgttttatcTTTTAGCTACCAGCTGCTa
ccagtccaacatttcatccaacattatTTTCCAGTGTTGGATGAAatttt
ggatgaaatgttggatgaaaaactAATAACGTTTATCTTTTGAATAGTAA
GAATCTTTGATCTTGCCACATATGTCAGATCAAAAAGTGCtttgtcaaaa
atttacattaagtTAAGGTATTaagatatcggtcaaaaactgattttgac
gttataaaatacattgaaaaaacacgtcatgactaagattcaaatgacta
ttgattattgaaaaacggcgataacttcaattctattaatgcaatcaaca
ccaaattttgacgttGTAAATCTacgattctgaaatatttgttaaaaaaa
tttcagaatatTTAAATGAGGTAATTTGTTGtcaggaaaaattaaaatac
gtcaaaaaatgctgacgtcataacgtcaaaatcttgagattggcttaata
tcaatttttgacccagcacttttcgaaatcctctcgttgatacgattctt
ttgagctTTATATGAAAGTTAAGGGATAATGGGAAGTGATGCTCGTCatg
caaaatttattttggacatgccttgtttcacccgagatGGTAAAcaaatt
tcatccaacatgttttttcttctttttgaatttcctttttttttaattta
attttacatTGACACAAACCAGTTCAACATTCAGAAAATCACATATTTAA
AGAAATGTTGGGTTGGTTTACCCTGGCCCTGGAGTGTTTGATTTGTTTGT
TATTACTATTGCATTGGAAGCTATGTACCTGGATAATAGGTTTTTATGTG
ACAAGTccttaacaaaaaaaaaaaactccttAAGTTTATTAGAATTAACT
TTAtaactaaaaaataatttttgtgtttctatgaatttaaaaagatagat
agatagatatgccctccgatgcatcggaatgggtcctacccacggtggag
taggaatcacagcgcaagcagacattgcaacNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAcgg
cacaccacaatgtctgaaatatctacccatactcttgtatcagagttatg
gtacccaattcccctcacatggcatgggttgacccgggcgaaggagcatc
cacttgccaagtgaatcgtagtgccacggtgggtatcgaactcgagcctc
ctggacagaagtcaagcacgataaccactacaccactACGCCATTTAAAA
AGATTACATTAATTTATTCTATGTTAATTTCCTCTTATAGCTTGATAAAA
ATGGACCATTTACCACTTGAAATCTTATTTAAAATTCTCAAGGCTTGTTC
TTTTGATGATATCCAACATTTGGCTTGTAGCAGTCAGTTTTTTCGAAAGA
CAACTCGCTCAATATTATGGAAAAAAGTGACTATACCACTGAATGGATAT
GCTGAATTAAAAGACAAACCTTTAGAAGCACTTCAAAATACTCGAAGTAT
AATCTTCAAGAATGATTTTATGACAATTTCACCTACTGGTGGTGTACAAA
TGTTGGAAAAGATTTTACCACATTGTAACAAATCAAAGATAGATTTACTA
TCTTTTAACAGCATTTTCTATAAAAATGTTATTCCATATACATTGGCTTA
TTTTGATCACGTAGAAACACTTGAGTTTGATTCTTGTAGTTATTTGAGAG
ATAATTGTCCACCCATTGACAGAATACCAACTTATAAAGTACTAAGTTTC
AATGGATATACAAGATTCGATGAACAAATTATTCGACAAAATCATCATTT
AGAAGAAATTATAATCAATCATGGATGTAGCATTGATACTGGTGAGATTC
AAGTGTTGGGTAAAGCTACTTCACTAAAGAAGCTAGAACTATGTTGTGTA
AATCAATATGAACACTCACAACCTGGAAACTATTTAAACTTCAAACCACT
TGGACAGCTTACGAATTTGACATTTCTAGATTTAAGTTTTTGTTATATTC
CCAAAGATTCCTTCCAGGAACTATGCAAAAAGTTGGCCAAGCTAGAAGTT
CTGAAATTATTTCATTCTTCAACGGAGAGTGAAGCTTTGAAGAGCCTAAA
ACATCTTGAAAGTTTAAAAGAATTGGAAATCGTCCCACCAAGATATCACA
ATATGACTATCGAGTTCTTTAAATCTTTGAAGGCTTCTACAACGCTCCGA
GAAATAACTTTTCATTTTACAATGTGCCGCGGAGAGGATAGGCAGTATGT
TGCATGTTTGAATTCTTTCAATTccttaaagaaaatcaatattcgCAGCC
CAGGTGAGATCATTGATGATATTATATTGGACCTTGATTCAGTCTGGGAA
TACCAAGAATGGACACACGCTGGCATGACATTCTGTAATGACATTGGCAC
AGAACTTGTTATCATGTTTGCAAAGGCCTAAGTACAAGTTTTAATAACCC
CTTCTGTGAAAATGTAAGGGGGTTTTTgtttatataccgggtgcaccaaa
caaagtatacaactttgtcgagatattgtgagcttcaggatttaaatttt
ttgttcattctttttttatcgcatagaggatgctctaacttgaattttga
gctatcatacattaggtttgaaaaagtaattcgaaaattatttcaaaaaa
acttactttttttatttcaaaaaatcatcgaaaacagcgagcaaacattt
ctcttgacacttaccttctttacacataaaaatactaaaattttaAATAC
TAAAACTCGTTacagaatttaagaatatggtaaaacaagctattcccatg
tggaataatatttttggaaaagttgataaaagtttttagaaatctccaag
agaggcTTTGAtgtgtgctatgtgagaaaatctttgaaaaaatagatcac
cattcctcgactagttgctcaaagaacttgggtctgcattgagtttacTG
GTGTCGGAAATGTTCATGTcgtgcaaataagatggaaaAACTGTTAGCAA
AATGTAAGAtaagagaaaaaagaattaaaaaaacaatgaaattgtgtttt
tgtcattttgtcttatttatataGCATGATTGctgttttaataatttttt
gcaatttcaaacagtcagttttttggaaataactttcgaactattttttc
aaatttaatgtataatagctcaaaattcaagttagagcatcctctacaca
ataaaaaaaagtgaacaaaaaatataaatcctgaagctcacaatatcttg
acaaacctatatacttttttttggtgcacccggtacagCTGAGAATAAAC
TTGTAGCTAGACTTAGAGATATACTATTATATAGAATTATCGTTTTTACA
GTACTACACAGCTTTATCATAATAGACTTAGGAGAAATTGTGAGTATTTT
ATAGATTGTCATTTTCTATTCCTTCAGCTGTCTAGCACCGCCTTATTAGT
TTTGGTATTATATGGTAAGTCCTTCTGAAGATGGTaggaaagttttttga
aattcaattgtgtaattttttcTCGATTACTTTTACTTTAGGTGATAAAT
AATCAATAAATATTAAcagaaaatatataaatcaattTGAAGAAAAGCGA
AAGATGAGTGAACAGCAACAGAAGAAATTAAAAGACATGTTAAGTATGTC
ATTAAAATTGACGGCACAGGAAGAACAGTCATACGACGACGTCAAAATTG
ACGACGAGCGACGTAAATTTCTTGACAGCGCTATCAATGAAGTTCTTGAA
AACGACGAAGGGCATCGTATCACATTGATGACTCAGCTCTTTTTAACGTA
TAAGCCGGACGAGAAATTTGGGGATGAAAAATTAGAAGAATTGCAAAACT
TATATGAAGAGTTGAATTATTTAAATGAGGGTTTAGATATTGCAAAAGTC
TTTACATCGAATGGTGGCATGAAACATAATATGGCTTTCCTCAAGAAAAG
TCCTCATGAAGAGTTGAAAATTGAAGCAGCTAACTTGATTGGAAATTCTA
CGCATAATAACCCTGTCGTACAGGTTGCCATTTTGGAGCAGCATGGTATT
ATTTTGTTGCTTTATCATATTAAGAATTCAACAAATGATGGTTTGGTTGT
GAAGTCACTTTATGCGTTGTCTGCTTTAGTGGGAGGCAATGATTATGCTG
AAAAGGAGCTTTGTAAATTAATTGATGACACgttttttatgaatattttt
gatcGTGACAACGAAAAGATTCGTACTAAGTCTTCATTCTTGCTTATGAA
GGTGGTCAGTAGTGATGCGTTATCATTGCATGCTGTTGAGAGATTAATCA
CTAATAAATTGgtcttaaaagtttttgaaattttagagtCACCTTTACAA
GCTATTCATGGgcatattttgaatttgttgctGGCATGTTTTGGGAAAAT
TGAACCTAAGAAATTGCTGACATCGATAGAGATTGAAAAGggttttgaaa
tattgaaaaattcatGTCAAAGGATGAAAAATGAGGATAAAGAAAGCTAT
GAATTGGAACTTGAATCATGCAAGAAATTAATGGCTCAATTAAAATGATA
CTCTTGACAATATGAGAGTTTTATTATAGgaatattttcttgaattttat
aAGCGTAGAATATATAGCAAATTTGTATTTTGATACAGTTTTACACTTTT
GAGCCTGGTTTCTTCAGACCCTGTGGGTGATAATTTTCCGCTAAACTACA
TAATATTTACTTCTAGGGGTCaatactaaaatctcagacactATGACGAT
TAGTGACGTGGTtatacagaaaaaaataaaagaatccaTTTAACCTCAAG
ATGtgctaaaagcaaaaaaaattgtgtacaaaGGATATTAGTTTATGTTA
TGACTAACAGTAGCCTTCTTTAATTTTCataattctttcaaaagataATA
TGAGATTTTTCCCTAGAAAAAcggttttaaatcttttttgcaCCTAAGAT
ATCAAAATATTGATTTATCCTCTAATTGAGTTTTCTTGGGAAATTTTTCC
TTGACTAAAATCAATTATCTCTTTTAATGTCAAAATGTATTAAAATACTA
ATTCTCTACATTAGGATAGTGGTACGCAAAAGAATCACTTTTGGTACCCA
TGtgtatgtctgagattttaatACCTCCCTCgagtttttaatttgatttc
tttACTTCATCAAGTTTTGATGCCATACTTACTTACTTGAAGATTACTTG
AAATTGATTTGTCTCAATATTGAGACCACCCATCTCGTTGAGACCACACC
AGTGTTGTTGTAAGGGTGCCTTGACTGCCACTGTGTTTGATTCAGCTCAA
ATCAAGCCAGTGTAACCTGAAACGAGAGGTTCATCAGACACAGTACACAG
GAATTTATCAAGTTGATGTTTGAAGTACATACAGTATCTATTTATTAATC
ACAAAGTTTTTAGCTGAATTCATGGTGAAAAGGTGCAATTTCTTAATTCA
CCGTAAATTCATCAAAATGTCAAATTAAGCATTTTCAATTAGTTCATGTG
CTAGGTATTCAAAAGTATATGTTTTGGAGTTGTTTCCACTGTTTTGCTAC
GCTGTTTTTTTTCTAGCTTTATGATCTCATTTTTCTCATTACAGATAAAA
GAAACAAcagaaaattaaaataaaataaaaacaaaatgtcaTTGGCAGCA
TCAAACAGACTTTTCAACATTCTGAGAATCACGACAAGACATTCACCAAA
CAAATTGCAATTTTATCGAGGCTTGTTGGTAAATACAACATTGAGAAGTG
AAAGTGCGGCCAAGGAAGAAGAACCGAGTTCAGAGCAcgaaaaaattttg
gctgagaAAACCAAAGAGATTGAAGATGCCAAGAAAGAGGCTGGAGATTT
TAAGGATAAGTATATGAGAGCGCTGGCCGAGAACGAAAACATCATGAAAC
GTAACCAAAAATTTTTAGCTGATGCTAAATTATACGCCGTTCAAAGTTTC
TCTAAAGATTTGTTGGATATTTCAGATGTCTTGGAGAAAGCAACGGAAAG
CGTTTCACAGGAAGAACTCAAAGCCAATAAGGAGCTGAATGATCTATACC
AAGGGTTAACTATGACATATACGGAGCTTCATAAAGTTTTTGTTAAACAC
GGACTCGAAAAGGAAGATCCATTAGGACAGAAATTCGATCCTAATTTTCA
CGAAGCCGTCTTTCAGATGCCTGACCCTCAAAAGGAGAAAGGCTCAGTTG
CAGTGGTACAAAAAGTCGGGTACCGGCTCCACGGGCGAACACTACGTCCT
GCTATAGTGGGCGTCGTTCAATAAATAGAACCTTTTACAGATTATTTTTT
GGTGCAAATTTTATATGTTATTGTTTTACAGCAATGTGATACTCCGAGAT
GGACGATTTTGTGCTCAAGTTTCCATTCGAAATCGTTTGGCTAGCACACA
TCTTTTTCCCGCTCGTAAAGTCAAGATAGCGATTTAATTTTGCATTTAAC
TTTTAGAAGTTCAGGTTTTTAAATAAAGTTGTTTGCTTATACATTTTTGC
AAGAGAAGACATCAGCGACTTGCTGATtcgattttttacaaaatacgaat
tatttaaaaaacctcaaaaattaTTTCCCACAAGTGAAATCTGATGAAGT
CATCATTACCGTTAGACGAATTTGAGAGAGTTTAGGTGGTACCATAATCT
TGCTTTTGCTTTTGTAGAAGTATTTGTAGAAATTATAATAATAtctttat
actttttattttgcaaCTTGGATAGAATGTTTATAAGTTTTCGATAAATT
TAATTTAGTCTTATCTGAAGATGTCGAATAATTTAATTCTACCAAAGGAT
AGATAGCCTTGAATTTATTTTCCTTCT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032638	XLOC_032638	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00051486-exon-scaffold_202-1491911889:217656..217797	TCONS_00051486-exon-scaffold_202-1491911889:217656..217797	Clytia hemisphaerica	exon
TCONS_00051486-exon-scaffold_202-1510915933:217656..217797	TCONS_00051486-exon-scaffold_202-1510915933:217656..217797	Clytia hemisphaerica	exon
TCONS_00051486-exon-scaffold_202-1575043694:217656..217797	TCONS_00051486-exon-scaffold_202-1575043694:217656..217797	Clytia hemisphaerica	exon
TCONS_00051486-exon-scaffold_202-1491911889:237300..238532	TCONS_00051486-exon-scaffold_202-1491911889:237300..238532	Clytia hemisphaerica	exon
TCONS_00051486-exon-scaffold_202-1510915933:237300..238532	TCONS_00051486-exon-scaffold_202-1510915933:237300..238532	Clytia hemisphaerica	exon
TCONS_00051486-exon-scaffold_202-1575043694:237300..238532	TCONS_00051486-exon-scaffold_202-1575043694:237300..238532	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_202	supercontig	scaffold_202:217656..238532 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.7707	72.4373	22.6342	16.8524	67.0879	48.7013	43.226	47.316	41.7678	41.0554	38.9339	32.0905	24.1617	20.0696	23.8773	25.5684	52.0097	40.2914	12.7114	25.7908	47.7939	47.7297	72.8438	65.6793	25.775	32.4791	55.9842	45.0079	55.103	51.0195

Blast

[Close]

BLAST of TCONS_00051486 vs. Swiss-Prot (Human)
Match: GRPE1 (GrpE protein homolog 1, mitochondrial OS=Homo sapiens GN=GRPEL1 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 4.271e-50
Identity = 82/140 (58.57%), Postives = 109/140 (77.86%), Query Frame = 1

Query:  403 DKYMRALAENENIMKRNQKFLADAKLYAVQSFSKDLLDISDVLEKATESVSQEELKA-NKELNDLYQGLTMTYTELHKVFVKHGLEKEDPLGQKFDPNFHEAVFQMPDPQKEKGSVAVVQKVGYRLHGRTLRPAIVGVVQ 819
            +KY RALA+ EN+ +R+QK + +AKLY +Q+F KDLL+++DVLEKAT+ V +EE+K  N  L +LY+GL MT  ++ KVF KHGL K +P+G KFDP  HEA+F  P   KE G+VA+V KVGY+LHGRTLRPA+VGVV+
Sbjct:   76 EKYKRALADTENLRQRSQKLVEEAKLYGIQAFCKDLLEVADVLEKATQCVPKEEIKDDNPHLKNLYEGLVMTEVQIQKVFTKHGLLKLNPVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGVVK 215

The following BLAST results are available for this feature:

BLAST of TCONS_00051486 vs. Swiss-Prot (Human)

BLAST of TCONS_00051486 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GRPE1	4.271e-50	58.57	GrpE protein homolog 1, mitochondrial OS=Homo sapi...	[more]

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TCONS_00051486 (transcript) - C. hemisphaerica