TCONS_00051431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051431
Unique NameTCONS_00051431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2559

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051431 ID=TCONS_00051431|Name=TCONS_00051431|organism=Clytia hemisphaerica|type=transcript|length=2559bp
AGAAAAATGATGACTTCAAATCAGTTAAAAATTGACATGATAGCAGCTGA
GCAGAAAGCTGGAAAAGTGAAGATGGAAGAAACATGTGAGCATCAGATCA
CCCATTTCGCTGTtcgttttgaaagaaaatgtcgaTCCTTTTTCACAGGT
GAATGCATAGAGGGTTTTATTGATGTGGATGTTAACACAAGTCGAATATT
GGAAGATATTGCATTGCTTTTTCGTGGGGAGACGTTAGCCTGTTGGCAAG
ACAATGAAGAGGCTGGACAACAGAATACCATGCGTGTACATCGGTCCCAC
TGGAAAGACGAAATGATTATTTCTGATCTATCACATGGCACAGAATCTGG
AAATGGTATTATCTCGTTCCCCTTTAAAATGTATTTACCAGATGGCAAAC
TTCCTTCATCTTTTGAAAGCAAATTTGGTGCAGTGAGATATTGGTTAAAG
GTTTCTCTCAGTCCTGGTACTGTCAACTGTCAATATCCTTTCACCGTCTT
GGAGAAAATCAATGTCAATGATAAGAAATATCAAaaaagTGTATCGAGTT
TTACGGAGAAGATGATATGTTGGATGTGTTTCCGTTACGGAGGGATTAGT
TTGACTGCAAATATCGATCGATCAGCGTATTGTCCTGGTGAAGCCATCGC
TGTCAACTGTCGCGCTCACAACAAAGCTAATAAAGAAATGGGCGGACTGA
AAGCGAGGCTGGTTCAAACTATACAATATAAATCAGAAgataacaataaa
ataaaagaagtGGAGGTTATTCTAAAAGCTATCGGTGGAAACCGCATTCA
GAGGAATCACACTAAAGTATGGGACAACCAGTTGCTATGGGTACCTTCAA
TACCACCTACAAACAAAGATGGTGATCCTAATGATATCATCAAAGTTTTA
TACCATGTACAGATCTCGATGGAGATACCGAACGACGCCGACTTGACGTT
GAAATTACCCGTCACCATCGGTACCATTCCATGGAAAGATAACAAAACTT
CACAaatacaacaacaacagcaagaAAAAGACCGATCATGGAGGTTCATG
AAGTGCACAGACGGTAGTGATTGTTTTAACCGATCCAGTAAACGATACCA
ATTCCCAATGCAACCTTTCATCCCGTCAACCATATTCGTTCAAGATTATC
ACCCTTTCTTACAAAAACAAGTCAACAACAATCAAACTTTACAACGCTCT
AAATGGAAAAACGATGAAAGGCAACCTTTACTACAACCAAGACACGCGTG
AGATGAGtggacttttttgttttgacgaTAGCTTTCGACAGATTGGTGAA
AGTGGAAAGATAGTTGAGAGTTGAAACCTCTTTTTTATTGGGATTGTTAA
TAtaaatctttgaattttttttcacaaatttttgacGACTAATTTTAAGT
TTATAAAGTGTGTTTGATAATCAATGATATCGTGAATTTTTTCTGATTGT
TGATATTCATGACTTATTCTTTTACATGGAAACACCCAAAAACATCGAGC
CTGTGCAAACACCCGCTGTTCTTTGGGTGTTTTCGTATAAGATAATAATT
ATTCATTAATATCATGAATTTCAGAGTATAATATACAGTGCTGtaacaat
gtttttgtgtattttacaaagGTTTTTATTAGTAACGTTCACTCATAGCT
AATCATTTATTAAACCTGTTGATTTTGGGTCAAAAAGATTCCTCTACATA
GCCCAAACCGAGTGCAGGTGCCAAATTTTCAGGTGCAAGTGTAGGCGGTT
TTTTAACCCCAAGTGCAAAGTTCCGCTATTTTCTCCTCAAGTGCAGCTAA
TTTTAGCAATCTTTTgcctttttgggccaatttccgAGGTATAGGTGCAC
CTTGTCCGGGCCATAATTCATCAGGTGCGCTCTTTCAGTGCGTGAAGTGC
AGCCTTGCACTACTGTGCAAACTGGCCAGAGGGTTCTAGCTAATGTAATG
CTAATGTTATGCTACAATATGAATTTTTAGAATGAATTGTCGATGTTTGA
TTGACCCTATAATAATTTATTGTGAAACGTCTATATGTAATTTGTATATT
TTCGATGGAGCTCATTCTTCGAGCTTTCATGACAGTTAAATTTGATTAGT
AAGTTCTTAACTCTatcaataccgagtttatgtatcgaaggatatcgagg
gcgacggtaagtgaaatcgatacaaaacaaagtcgatagttgattgatgt
acggctctatatcgcctttgctcacctaaacagacgacggtattttggtg
tttttaccgtcgtcgagcaaagtggatggtgattttggagacatctCAAC
TTTGCTTTACACCGCCCCCTCGATTTacctcgaatacataaactcgctaa
tactAGGATTTCAGGGGTGGTTCAGGCTAGGGAGGGGGCTTTttctgtac
caccccttaacctTAAATGTACGTGTGTCATATAGCTTATATAAAAGTCT
TCAAATGTAAATCTTACCAACATTTTTATgaaacaattctaaaaaaagtA
AGGCTGAAAGTCTGGGCAAATTTAATAtacaaaaaaagtgagaaatcata
aaaaataaa
Run BLAST on NCBI

transcript from alignment at scaffold_201:583520..591094-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051431 ID=TCONS_00051431|Name=TCONS_00051431|organism=Clytia hemisphaerica|type=transcript|length=7575bp|location=Sequence derived from alignment at scaffold_201:583520..591094- (Clytia hemisphaerica)
AGAAAAATGATGACTTCAAATCAGTTAAAAATTGACATGATAGCAGCTGA
GCAGAAAGCTGGAAAAGTGAAGATGGAAGAAACATGTGAGCATCAGATCA
CCCATTTCGCTGTTCGTTTTGAAAGAAAATGTCGATCCTTTTTCACAGGT
GAATGCATAGAGGGTTTTATTGATGTGGATGTTAACACAAGTCGAATATT
GGAAGATATTGCATTGCTTTTTCGTGGGGAGACGTTAGCCTGTTGGCAAG
ACAATGAAGAGGCTGGACAACAGAATACCATGCGTGTACATCGGTCCCAC
TGGAAAGACGAAATGATTATTTCTGGTAAGCACGTACAATTTAGTAATCC
AAGTATTTAGGGAACTTGTGTCTTGTTATCTTAAGCTTAATATGTTTTCG
ATATGTAATATCTGATTAAGAAAAGCCCTTTGGGATAGTTATAGTAGAAC
AAACTTGGCAACAGCGTTTAGCTCAATACATTTAAGTTCCAGTAACATAA
ATGACATTCACGGCCATTTCAGTGGAGTGGGTACGTTACGTCACGCTCAT
TTTTGACTGGATGCTACCAGTAGTGGCCAATGCACCGTTTGATAGCGCAT
GTACAGGTGGCTCAGTCAGGCATAAACTCTCAAATCGTGGTTGACAAAAT
CTTGGAATGCTTGCAAAAAGTTAAAATACTTCTTTAAATAAGTCTGCTTT
CAGACAGCGTCGAGATCTCGAGATTAACGACTGATGATTTCAGTGATCTC
CTTCTAATACATAATCAGCTATCATATACGTGCATCCTGTAAGGGTATGC
AATCCATCGTTGTGCATTTACGAATTGGAAGCGTTGAATTGTACACAGAA
GAGATTCACTTACGCGAATAGTAGTAGGCCAAAGTTATCAGGTGGATTGC
TATGTTTTGTATACATAAATTACTCTACATGAGTGAAGGTAGAGAGTCTA
TCAATATATTTCCCTAACACCCTGACTGGAAGTGATTGGGATTCGAACAC
AGTCCATTGCGGTGCAAGTCCGTGATCGAAACCTCCACACTACCAATCGG
CTAAATTACCCTAGTTTGTTATTTGAAAGAAGAAAATATCTGAAATTTAA
ATTATTTTTCTCATAGATCTATCACATGGCACAGAATCTGGAAATGGTAT
TATCTCGTTCCCCTTTAAAATGTATTTACCAGATGGCAAACTTCCTTCAT
CTTTTGAAAGCAAATTTGGTGCAGTGAGATATTGGTTAAAGGTTTCTCTC
AGTCCTGGTACTGTCAACTGTCAATATCCTTTCACCGTCTTGGAGAAAAT
CAATGTCAATGATAAGAAATATCAAGTAAGTCCATTAACAAGAGAAAATA
AACTCTACGATTGAAGTATCATCTCAATGATTTGATATCCATGATATAAA
CGATGTCTTCTGACATTGCATCACGGACCCAATAGCTGATTGGTTGTAAG
TGACGTAAAATCAGTCAATACGTTACTTTCAACCAATCAGCTGTTGAGTC
CGTGGAAGACATTGCAATGGTGCATATCATGAATATGAAGATTTGATATG
AAGGTTACTTTCATACAAGAATTACAGTTGACGCTCTCTAATTCGACGTT
TTACTTCGACGTTCTACTATTCGATGATACGCATCATTATTCCATAATGT
TGAAAGTCACAATCAACAAAGAAACTATCATGAAGGACGCTCCCTTATTC
GATGAAAATCTAATATCCCTTGAGCATCAAATAAGAGAGCGTCAACTTAA
CTATTTTGAAGTATGTTCAAGTGGGAAATCCTTTTATTCAAAATTTTACT
CAAAACTCATTTGAGGATGATTTAGTGGTCTTGGTAGACACTTTTGAGGA
ATATTGGTCTATTTGCACGTAAACCAAGATAAGTGTAAATCATATGTTTC
GTAGAAGCAACTTTCATTTTCTTTTTAAGAAAAGTGTATCGAGTTTTACG
GAGAAGATGATATGTTGGATGTGTTTCCGTTACGGAGGGATTAGTTTGAC
TGCAAATATCGATCGATCAGCGTATTGTCCTGGTGAAGCCATCGCTGTCA
ACTGTCGCGCTCACAACAAAGCTAATAAAGAAATGGGCGGTAAGAAAGCG
GTATTGTTCGTACCTTGGGTGGTAATTAAGGCGTTAAAAAGGGGGTCTTG
AATATTCTATTCTATAGTTTTATGCTCCTGAACTCACGAAATGCGTATTC
TTTGATTCTCAGCGATTTATGGTTTTAGAAAACTTTAAAAGTGTAAAAGC
AGCTAATCTATAAAACAAAAAAATGAAGCGACTGCTTGTGTTGAAATGTT
CGTCAAATTATACGTGGCTTACTTCATCAGCATGTAGCTCGACAAAAGAT
GATGTCCTTTTACAAAAAAATTTGACCTTGTATAATCAATTATCATAAAA
ATCCTTTTTTAATTGAAATCGCCTGTATACAAATGATTTTATGTTTCATG
TTTTTCGAAGTAAGCTGTTTATATTTTCTTGTTGTTCTCACAGGAGAAAA
CCTTTTAACTCGTTGTTATGATTTTGACAGGACTGAAAGCGAGGCTGGTT
CAAACTATACAATATAAATCAGAAGATAACAATAAAATAAAAGAAGTGGA
GGTTATTCTAAAAGCTATCGGTGGAAACCGCATTCAGAGGAATCACACTA
AAGTATGGGACAACCAGTTGCTATGGGTACCTTCAATACCACCTACAAAC
AAAGATGGTGATCCTAATGATATCATCAAAGTTTTATACCATGTACAGGT
GGGTAGATCGCTTTTCATTGTTAGCTCTGGTTTATACGATCCATTTTTTC
CCAGTCTATTCTAAGATCACGTTCACAGGCTACGTTCCGTTTCTCTCCGA
AACGAAACGGTTCCGAAACATTGTGTGAACGTCAAAATTGGAAACGTCAA
AAAAGAAGACGTTACAAAGACATTACAAAATTTCAAAAATGTGGAAAAAC
AGCCAAATTTCAACCAAAAACGACATCACCTGGCAAGATCCTGATCCCTG
ATTAAGATGCGAGTGACAACAATCGCTGTACCGAACATAAATGTATAAAA
GATGATGACAAAATGAGAATTCAATGTCATAAATGCCAACGAACGCTACA
TGCCTGCACAGGACTACCACCTTACCAGTTAAATATGTTTTTAAATAAAG
GTTACCGAAAATACGTGTGTATAACTTGTTGCTCTCCAGCAAAAAACCTC
GGTAGAAAAGTTCATAATCAAGCGGAAAGAATTAAAAGCTGCACGCACAG
CTACTATAAAGAAATTGAAGCGTGCGAAAGCATAATAAAAGTCAAAAGTG
AGAGCGAAAAAAGACTAAACACAATGGTCAATGATCTACAGGCAAAATGT
CAGGAATACATCAAGGATAAAAATCAAATTACCAATCTAATACAGGGCCA
GTTTTCCACGCTAGAAACAAAACTAGCAGCCAAAATAGAAGAGACGTTGA
ATAACAAGACTCCAAAAATTCAAACCACAACAGGCACGAAAGAAAAGTTT
TGCTGAAGCGACTAAAAACAATGATCGATTAAGCGTAAATAGCATGAAAC
AGCTACTACGAAGGGAGAAAATAGAAGAACAAATTGAAGACCAAAGAAAG
CTATCGACAGAAGCAAATATCATTATCCATGGGGTAAATGAAAATAAAAG
TAAAGAAGATATCGATTTCGTTACTGAGCTTCTGAATGACGTTAATTTAA
AGACTCAACCAACCTACGTCTCTCGTGTTGGAAGAGAATCTAAAGTTATG
CGCCCAATCAAAGTTGCATTCAAAGACAGTCATAACAAATACAGATTCAT
GAAGAAGTTGACTGAATTGAAACAACACGAGAAGTACGCGAAATTAAGTA
TCACCGACGACTTGACATAAATGGAGAGGGAACAAATCAAAGAGTGGAAA
AAGACAGCAGACGAGATGAATAAAGCCAGATCGAACGATGGTTTTAAATG
GAGGGTACGAGGAAGCCCTCGTGAAAAATTATGTTTTAAAAAGATTTTTT
GTACAAAAATGGTTTAGAGGCCCTTGTGCCTGAAATGTAATTCATTATAA
TAATGTTTCATAGAGGTCAATAGACCTGCGAAATATATTGCTATATAATA
ATAATATAAAGCAAAACAGATCGAAAAGGTTTCGCTCCACTATTTTCATC
GGAACGGAACTACTCCGTTTTCTTGCTCCGAAACGTTCCGAAATGAGTAT
GAACACTTCCTATCCGTAACAAATACCACACCGGAGCGATACGAAACCGT
AACGTCTAAACATGGTTGGCTGTTTAAAGTCGATACATTGCCTTCTGTTA
AGGCAAATACAATGGCTTCTTTCAATATTTCCAAGTAATGATTTTAACTT
CCAATATTCTACGAATTGTTGCCTTCTCTTACAATTAGAATAGGCAAAGT
AGGAAGTCTAAAGTATAGAGCTTAGTCGTCTTGTTCACAAACTACCTATT
ATATCAATTTTTGCTGTCGTTGAGACCGGCCGGGGATGTGCACACGAAAG
GCCGGCTATCATTCCTCCCGATGGGAAATTGGCCCGTTGCTTTAGCGATA
TAGCGTTGGCGGCCGGTCAATCTTCCATTGGAACATCAAATAAAGTCAAA
TACTTTTTGATATCAACACATACACACCGGAAAATCCTTTTTCTGTTTTT
GATTCAGATCTCGATGGAGATACCGAACGACGCCGACTTGACGTTGAAAT
TACCCGTCACCATCGGTACCATTCCATGGAAAGATAACAAAACTTCACAA
ATACAACAACAACAGCAAGAAAAAGGTTCGTATCTCCCCTATTTCTATTT
GGTTGAGTTGCAGGAGGCTTTGAGGCCTATTTTCGCAACTATAGACGCTT
TCAATGAGCGCCCCGTCAGCACCTTGGACTGACTACCCAATTCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGA
CTGACTACCCAATTCCCCTCACATGGCATGGGTTGACCCGGGCGAAGGTT
CATTCACTTGCCAAGTGAACCGCTGCGAGTGGGAATCGAACCTCAGTCTG
CCTCAGTCGCCTGTGCAGCAACCAAGGTCAATGACCACTATACCACAGCG
CCTTAAAAAAACAACATAGTTAACATAATTGACACTGTTCTTACTTATCA
ACTATCTTGACCTCATAAACTTGAATCCCTTCCTTGTTGAATGAATTCCT
CATGTATCATGTTAAACTCATTTAAGATTCATGATTTGGCTTTCTCCCAT
TGGAACAGTAACTAACTATCCACGGGCTGATGATACATACAGTTGATATT
TTACGTGGATAGCCCAGTAATCTAAGACTTTTCCAATTCAGACCGATCAT
GGAGGTTCATGAAGTGCACAGACGGTAGTGATTGTTTTAACCGATCCAGT
AAACGATACCAATTCCCAATGCAACCTTTCATCCCGTCAACCATATTCGT
TCAAGATTATCACCCTTTCTTACAAAAACAAGTCAACAACAATCAAACTT
TACAACGCTCTAAATGGGTAAGCAAAATATAAGCCCTTCGGCACAATTCA
AGTTATCAGTTCTTCAGTTTTTAAGCATTTTTTTGCCTTATTTCAATTTT
TGCAATTAGCGTTCTCTCGAGTCTCTAATAAACAAGAAATTAGTCTAATA
CTTGTTGAAATTTGATACTTTTGTAAGGAATAGATATACATGTGGGAAAA
CCTAACAAAAAGTAATGAGCACTTAATCTTAGTCCTTAAAAAATCCATAA
CTCGCATGCACGGGGAACATAAATTTGTTCGAGTTGAGGAAATTTCGAGT
TATGGAGTAATGTTTATAAGGTATTTTTAACAGAAGGGAAAAACTTGTTC
GAGTTAGGGAGAGGTTCGAGTTATGGAGGTTCGAATTTAAGAGACTAAAT
TGTCCAAGGTATTCCAAAAATGAAACTACCTCGCCGCTATGATGATTTTT
CAGTAATTTTCCCTTTGATCGGATTCCACAGTTGTTGGTAATCTAAATTA
TTGTTGCGGAAGCCATTGTCATCGTAGAAATCAGCAAGATCGGGTTAAGC
AAATGGCTTTTCGTCGCCAGGTTTTCGGTCTAACTCGAACTTAATCTTTG
TTTGTCCTGTTTTGTAGAATCGACAGTTAATATACATGAAATTCATTGTG
CTTTCCTTCGTTCTTACCTCAGAAAAACGATGAAAGGCAACCTTTACTAC
AACCAAGACACGCGTGAGATGAGTGGACTTTTTTGTTTTGACGATAGCTT
TCGACAGATTGGTGAAAGTGGAAAGATAGTTGAGAGTTGAAACCTCTTTT
TTATTGGGATTGTTAATATAAATCTTTGAATTTTTTTTCACAAATTTTTG
ACGACTAATTTTAAGTTTATAAAGTGTGTTTGATAATCAATGATATCGTG
AATTTTTTCTGATTGTTGATATTCATGACTTATTCTTTTACATGGAAACA
CCCAAAAACATCGAGCCTGTGCAAACACCCGCTGTTCTTTGGGTGTTTTC
GTATAAGATAATAATTATTCATTAATATCATGAATTTCAGAGTATAATAT
ACAGTGCTGTAACAATGTTTTTGTGTATTTTACAAAGGTTTTTATTAGTA
ACGTTCACTCATAGCTAATCATTTATTAAACCTGTTGATTTTGGGTCAAA
AAGATTCCTCTACATAGCCCAAACCGAGTGCAGGTGCCAAATTTTCAGGT
GCAAGTGTAGGCGGTTTTTTAACCCCAAGTGCAAAGTTCCGCTATTTTCT
CCTCAAGTGCAGCTAATTTTAGCAATCTTTTGCCTTTTTGGGCCAATTTC
CGAGGTATAGGTGCACCTTGTCCGGGCCATAATTCATCAGGTGCGCTCTT
TCAGTGCGTGAAGTGCAGCCTTGCACTACTGTGCAAACTGGCCAGAGGGT
TCTAGCTAATGTAATGCTAATGTTATGCTACAATATGAATTTTTAGAATG
AATTGTCGATGTTTGATTGACCCTATAATAATTTATTGTGAAACGTCTAT
ATGTAATTTGTATATTTTCGATGGAGCTCATTCTTCGAGCTTTCATGACA
GTTAAATTTGATTAGTAAGTTCTTAACTCTATCAATACCGAGTTTATGTA
TCGAAGGATATCGAGGGCGACGGTAAGTGAAATCGATACAAAACAAAGTC
GATAGTTGATTGATGTACGGCTCTATATCGCCTTTGCTCACCTAAACAGA
CGACGGTATTTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGATGGTGATT
TTGGAGACATCTCAACTTTGCTTTACACCGCCCCCTCGATTTACCTCGAA
TACATAAACTCGCTAATACTAGGATTTCAGGGGTGGTTCAGGCTAGGGAG
GGGGCTTTTTCTGTACCACCCCTTAACCTTAAATGTACGTGTGTCATATA
GCTTATATAAAAGTCTTCAAATGTAAATCTTACCAACATTTTTATGAAAC
AATTCTAAAAAAAGTAAGGCTGAAAGTCTGGGCAAATTTAATATACAAAA
AAAGTGAGAAATCATAAAAAATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032587XLOC_032587Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051431-exon-scaffold_201-1575043694:590770..591094TCONS_00051431-exon-scaffold_201-1575043694:590770..591094Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1575043694:589770..589978TCONS_00051431-exon-scaffold_201-1575043694:589770..589978Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1575043694:589006..589165TCONS_00051431-exon-scaffold_201-1575043694:589006..589165Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1575043694:588347..588564TCONS_00051431-exon-scaffold_201-1575043694:588347..588564Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1575043694:586320..586437TCONS_00051431-exon-scaffold_201-1575043694:586320..586437Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1575043694:585528..585703TCONS_00051431-exon-scaffold_201-1575043694:585528..585703Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1575043694:583520..584872TCONS_00051431-exon-scaffold_201-1575043694:583520..584872Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:590770..591094TCONS_00051431-exon-scaffold_201-1510915933:590770..591094Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:589770..589978TCONS_00051431-exon-scaffold_201-1510915933:589770..589978Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:589006..589165TCONS_00051431-exon-scaffold_201-1510915933:589006..589165Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:588347..588564TCONS_00051431-exon-scaffold_201-1510915933:588347..588564Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:586320..586437TCONS_00051431-exon-scaffold_201-1510915933:586320..586437Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:585528..585703TCONS_00051431-exon-scaffold_201-1510915933:585528..585703Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1510915933:583520..584872TCONS_00051431-exon-scaffold_201-1510915933:583520..584872Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:590770..591094TCONS_00051431-exon-scaffold_201-1491911889:590770..591094Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:589770..589978TCONS_00051431-exon-scaffold_201-1491911889:589770..589978Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:589006..589165TCONS_00051431-exon-scaffold_201-1491911889:589006..589165Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:588347..588564TCONS_00051431-exon-scaffold_201-1491911889:588347..588564Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:586320..586437TCONS_00051431-exon-scaffold_201-1491911889:586320..586437Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:585528..585703TCONS_00051431-exon-scaffold_201-1491911889:585528..585703Clytia hemisphaericaexon
TCONS_00051431-exon-scaffold_201-1491911889:583520..584872TCONS_00051431-exon-scaffold_201-1491911889:583520..584872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:583520..591094 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	8.11439e-08	4.95544e-06	0.00040838	0.0161549	3.71019e-08	1.4577e-08	7.88906e-09	4.93223e-10	0	0.00026491	0	1.97184e-08	0	0	1.07247e-05	0.000150964	0	0.000787246	2.05475e-05	7.99533e-09	0.000121869	1.53628e-08	0.000844598	4.92093e-10	0.230786	1.42444e-06	1.21759e-08	1.49744e-07
Blast
[Close]
BLAST of TCONS_00051431 vs. Swiss-Prot (Human)
Match: ARRD3 (Arrestin domain-containing protein 3 OS=Homo sapiens GN=ARRDC3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.897e-30
Identity = 90/299 (30.10%), Postives = 147/299 (49.16%), Query Frame = 1 
Query:  139 FFTGECIEGFIDVDVNTSRILEDIALLFRGETLACWQDNEEAG------QQNTMRVHRSHWKDEMIISDLS--------HGTESGNGIISFPFKMYLPDGKLPSSFESKFGAVRYWLKVSLSPG---TVNCQYPFTVLEKINVNDKKYQKSVSSFTEKMIC-WMCFRYGGISLTANIDRSAYCPGEAIAVNCRAHNKANKEMGGLKARLVQTIQYKSEDNNKIKEVEVILKAIGGNRIQRNHTKVWDNQLLWVPSIPPTNKDGDPNDIIKVLYHVQISMEIPNDADLTLKLPVTIGTIP 981
            + +G+ + G ++++V     ++ + +  RG     W ++  AG      Q  T  V   + KD +I  +          H   SG    +F F+  LP   L +SFE + G+VRYW+K  L       V  +  FTV E I++N        +   EK +C W C   G ISL+A I+R  Y PGE+I +     N +++ M   KA + QT  + ++   K+KEV+ ++  + G  +    T+ W+ +LL +P + P+  D     II+V Y + + ++IP   DL L LP+ IGTIP
Sbjct:   24 YSSGDTVSGRVNLEVTGEIRVKSLKIHARGHAKVRWTESRNAGSNTAYTQNYTEEVEYFNHKDILIGHERDDDNSEEGFHTIHSGRHEYAFSFE--LPQTPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAGTKEKTLCCWFCTS-GPISLSAKIERKGYTPGESIQIFAEIENCSSR-MVVPKAAIYQTQAFYAK--GKMKEVKQLVANLRGESLSSGKTETWNGKLLKIPPVSPSILDC---SIIRVEYSLMVYVDIPGAMDLFLNLPLVIGTIP 313
The following BLAST results are available for this feature:
BLAST of TCONS_00051431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARRD31.897e-3030.10Arrestin domain-containing protein 3 OS=Homo sapie... [more]
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