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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051405 ID=TCONS_00051405|Name=TCONS_00051405|organism=Clytia hemisphaerica|type=transcript|length=2733bp
atataggaaagaaaatagaaaaatcaaactgaaacATGTACATAATGATG
AAGCAACGTCACAAAATGGATCCTCAGTAAAACTTACCAAAAAGCATACT
ACCAAATCTGGTCAGTTAATCTTTATGCAAACATGACGTCTAGGCAACTC
TCAGTGCATAACCAGAATGGATCTAGAAGGTCTCCTGACCAATCAGATTC
CTCAACCATATCACACTCCTCACCTGGGCACAGAACACATGCTCCACGGT
CAACCACCAGCCAACGAAGAACCACATCCAAACCACTTAACTTTCAACAA
GCAATGAGTGATTTCCGTACCATGTTTCCAGAATTGGATACAGACGTTAT
TGAAACTGTTTTAAGAGCAAATAATGGTGTTGTTCAAACTACAATAGACC
AATTGCTTCAATTACAAGAATCTACGCAGGTTGAGAAAGCACAATCCGGA
CCTGTTTTACCAAGTTATGAAAGCTCTATCGGTGATGGGGAAGAGCCACC
CCCTGCTTATAACGACATTTGGGAGGACATAGGACCCCCAGAGCCTGATC
CATTATTTCCAAATCCAAAAGTGAATGCAAAAATTCAATCACAACAAACT
ATTGCAGTTGAAAAGCCAAAGAAATTTCCCAGAAATGCTTTATGGAATGC
TCCACTTGTTGGGAAATTACCAAATGACTTTTTGCGAATCGATAATATTG
TTTCTACTAATAACTCAAATGCTTTGACTGCTGATTCTAGGGAACAAAGC
AATTACATGAACTTGAATAATAAGGATTGTAAACCAAAACATAATGAGAA
AGACTTTATGACAGATGATGACTTGGAGAGGTTTATGGAGGACGAAAAAC
TTGCTATCTTTCTACAGAACGAAGAATTTCTTAGAGAGCTGCGTAGGAAT
AGAGAGTTTGTATCATCACTTGAAGCAGATCACCAGGAAGCTATGATGGC
ATCTGGAAGTGCAGCTACTCCACCTGCAGCTTCAGTGGGTAGTGGTGGTG
CCCGTCCTCGAACTACACCAACACAAGAAGACGCACAATTTCGTCAAAAA
TTACGACACATGGGAAAATCAACAAGGAAAAAGTTTGGAAAAATggcaaa
gaaattttcacgAAACAAATCAAGCGGAAAACCTGCACCTCTTAGTATGA
CATCGTCAGAATCAACATTCAATCTTCTTGGAGATGACGAGGACGAAGAA
CCTCCAAGAACCACTGACTTGTTTGCCATagatgaagatgatgatgatga
tatgtTAAATCCTGGTGGTTTTGGTGCCAATGTTCCTGGTGACCAACGTG
AACAAGATAATCCTGATTCTACACCTTTCAATAAATATGCTGTTCAAaat
gaaaacaaaagagccAGACCAAGACCTTCAGTCAAAGGTGGACGACAATT
ACCCAAACCACCAGGTACCGCCACATCCACCACCACCACAACCACAAACA
ATGGGGTGGCTGATGAACCTATTGTCTTTTATAGTGAAGATAATGAGTTT
GCATTCAAAAATGAATGAGAGTGAAGGAGTATCATTTTCTCACTAGTGTT
GCTCGTACTTTTCATTTTACTTTCCtttcaaaaacgaaaatttctttttt
tctagttGATTGTTGATATCAATAGATAAATACAGTCAATTGATTACGTA
ggtagcccagtaatctagaacTTTTAAGTCTTTCAATTGTTCTTACGGGG
CCTACGACCAGCTGGCTTAGCTTTCTGAGAACTGAACAGAATATTGGAAG
GAGTGGGGATTCGAACCGCGATCACAATCAGTTTTCCTTCTCTTTTAAAG
TCTCGTCAGTTTCATCTGGTTAATGGTTTCTTTTCTCCCGCCCTCGAATT
TCAAAGTAGTCAGACTCCTCACATttctttgtaaaaatatttcttaaaat
tcaCGTAAAGTGGCTACTCAAACTTGACCCTTTAGGGTAaataaagttaa
tttttttaattttctccataTATAGTACCTATGGAAAATGGCCGGTTCAT
TATTTTAGCGTTATTCGTATTTACCCGTTTAGCTCATTTTtatgtttgtt
tatgtttttttttcggcGTTTCGGGTTTTATcttttatacaaaattttat
ttctaaaaattctttctttgcTTTTAATGAGCAAAATTTCGTTGtaattg
aaatttttccttttctttttgtatttatatatattttcaattgtttttgc
tTTAATGTACATAGTACCTTTTCGATACACcatattttttactaaaatac
cTTTCTAACTTCGTTTAACTTTTGAATGAATATATCACCTTATATTTCgc
caattattttgaaaaaagactgaatttctattgttgtttctttctaggga
tatttagaaaaaaaaatcaaaaaagttgaattttgtGGGGctcaatattt
tgttttgaaaggtaAGGTGAACCGACTTGTTCCAATATTTTCACACATTA
TTCATAAAAATACCATATCATTTTCATTCTAGACATTTAGTTTTAGGTAT
AAGTAataattatattattattattatttttggagaatttaatttatttc
tttgttttatgtttgttttaagaaaaaatattatttgtgaTAGCCCCCCC
CTATAAAATAGCTTGTAAATTATAGAAAAACCTCATTTAAGTACGTcgct
ttagattttttttatcataaagtttttgttttaaatttttccctCTATAT
AATTCAACATTTTATTCAGTCCGAAAAAATATG Run BLAST on NCBI protein sequence of TCONS_00051405-protein >TCONS_00051405-protein ID=TCONS_00051405-protein|Name=TCONS_00051405-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
MTSRQLSVHNQNGSRRSPDQSDSSTISHSSPGHRTHAPRSTTSQRRTTSK
PLNFQQAMSDFRTMFPELDTDVIETVLRANNGVVQTTIDQLLQLQESTQV
EKAQSGPVLPSYESSIGDGEEPPPAYNDIWEDIGPPEPDPLFPNPKVNAK
IQSQQTIAVEKPKKFPRNALWNAPLVGKLPNDFLRIDNIVSTNNSNALTA
DSREQSNYMNLNNKDCKPKHNEKDFMTDDDLERFMEDEKLAIFLQNEEFL
RELRRNREFVSSLEADHQEAMMASGSAATPPAASVGSGGARPRTTPTQED
AQFRQKLRHMGKSTRKKFGKMAKKFSRNKSSGKPAPLSMTSSESTFNLLG
DDEDEEPPRTTDLFAIDEDDDDDMLNPGGFGANVPGDQREQDNPDSTPFN
KYAVQNENKRARPRPSVKGGRQLPKPPGTATSTTTTTTNNGVADEPIVFY
SEDNEFAFKNE Run BLAST on NCBI transcript from alignment at scaffold_201:224476..230766- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051405 ID=TCONS_00051405|Name=TCONS_00051405|organism=Clytia hemisphaerica|type=transcript|length=6291bp|location=Sequence derived from alignment at scaffold_201:224476..230766- (Clytia hemisphaerica)
ATATAGGAAAGAAAATAGAAAAATCAAACTGAAACATGTACATAATGATG
AAGCAACGTCACAAAATGGATCCTCAGTAAAACTTACCAAAAAGCATACT
ACCAAATCTGGTCAGTTAATCTTTATGCAAACATGACGTCTAGGCAACTC
TCAGTGCATAACCAGAATGGATCTAGAAGGTCTCCTGACCAATCAGATTC
CTCAACCATATCACACTCCTCACCTGGGCACAGAACACATGCTCCACGGT
CAACCACCAGCCAACGAAGAACCACATCCAAACCACTTAACTTTCAACAA
GCAATGAGTGATTTCCGTACCATGTTTCCAGAATTGGATACAGACGTTAT
TGAAACTGTTTTAAGAGCAAATAATGGTGTTGTTCAAACTACAATAGACC
AATTGCTTCAATTACAAGAATCTACGCAGGTTGAGAAAGCACAATCCGGA
CCTGTTTTACCAAGTTATGAAAGCTCTATCGGTGATGGGGAAGAGCCACC
CCCTGCTTATAACGACATTTGGGAGGACATAGGACCCCCAGAGCCTGATC
CATTATTTCCAAATCCAAAAGTGAATGCAAAAATTCAATCACAACAAACT
ATTGCAGTTGAAAAGCCAAAGAAATTTCCCAGAAATGCTTTATGGAATGC
TCCACTTGTTGGGAAATTACCAAATGACTTTTTGCGAATCGATAATATTG
TTTCTACTAATAACTCAAATGCTTTGACTGCTGATTCTAGGGAACAAAGC
AATTACATGAACTTGAATAATAAGGATTGTAAACCAAAACATAATGAGAA
AGACTTTATGACAGATGATGACTTGGAGAGGTTTATGGAGGACGAAAAAC
TTGCTATCTTTCTACAGAACGAAGAATTTCTTAGAGAGCTGCGTAGGAAT
AGAGAGTTTGTATCATCACTTGAAGCAGGTATCATTATTTTATAATGGAT
AACACTTATCAAAGATAGGGTATATTTCTTTTAAGTTTTAGTCAAGGTTT
TTTCCCTTCATTTTAAACAAAAAGAAACATCCTCTTTTTAAAGGTTACTA
CTCTCTTATACTCAACTCTTAATTTTTCTTGCTATATTTGTGATACCTTT
ATTTAGTTTAATAAAAGCTTTTAAGCCCAAAAATATTCTTCTTTAGATCA
CCAGGAAGCTATGATGGCATCTGGAAGTGCAGCTACTCCACCTGCAGCTT
CAGTGGGTAGTGGTGGTGCCCGTCCTCGAACTACACCAACACAAGAAGAC
GCACAATTTCGTCAAAAATTACGACACATGGGAAAATGTAAGAGAGCCTT
CCTTGGAAAATTCAATTGTTTACCACACTATGTTTCATGCTTTTACTTTT
GATATACTCACAACATTTTGAAATGTGAAATGCCAGATCTGTTAGAATAC
ACACTTTAGTTATTTTGAAAGTAAAGGGTATATTACTGTAAGCTGATCAG
ATGATATTTTGTATTTTAATTGGATAAAGGAGGATGTAAAAATGAGATGA
TCTTTTAACCACATATTTATTTTATCTTATTGAAGTCATCAGTTCTATCA
TAAATCATTATTCATTATCTTTTTCAGCAACAAGGAAAAAGTTTGGAAAA
ATGGCAAAGAAATTTTCACGAAACAAATCAAGCGGAAAACCTGCACCTCT
TAGGTTAGTGTGCCAACTATCACTGTATTTGTTCTTGGAATCCCAATTTT
ATAAAAGAATCTTAAAGATTTTAAAGGTTTTAGCTTAACCTAGGTTATTT
TTGTAATCGTTTTTAATAAATGACCCCTAAAAGTTATTGTATTAACGCAA
TCTTTGAAGCATCATTCTCTCCTGATTGGAAAATTGTGATATCCAATGCA
GTAAGATGTAAAATTTAACAATTGTAGCAAGACAACCTTCTCCTCTACAA
TTCTGTGTTTACTTTAATATTTTGAAAGAAAAACAATTGGAATCCTGTAA
AAAAAACATGAGAGAAACTTTTTCTATTTTCTGTTAGTATGACATCGTCA
GAATCAACATTCAATCTTCTTGGAGATGACGAGGACGAAGAACCTCCAAG
AACCACTGACTTGTGTAAACTTTCAAATTAATCATTTTACTTTTTCATTA
AAATGCTATTTTAAATCTGGTTACATTGATTTCAAAATTTTACTACGCTG
CAATAGAATAATTGCCTATCGTGAATAAGTTTCTATTTTCCAACTGTACA
ATCAAGATAATAATTCATTCATCTGAATTTCGGAAGATTCTATTTAAGTC
CTCTCCATGTGTTCTGATGCTTAACATGTTTGAACTAAAAAATCATCAAA
TAGCTGGGCAAAACCAAACAGGGGGAAATGGGATAAAAAGAAATCTAATT
TTTGGACCTACCCCGGTGGAGGTCCTACAAATTAACCTTTGTCCTTTCGT
TCGTCTGTTCGTTCGTTCGTTATTAGCTTTCCTCATGATTGGCTCGTTAG
TTTTTTCTGATTTTTTGCACAAAGATGAATAACTATAAACCCTCGAATGT
GACGGAGCCCGATTTTCAAAAAAAAAATTTTTGGGCAAATTCGGGCCAAA
AAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTA
ATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCGTAGGTAAAAGA
TGGCTTAAGCAGATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCAT
GTTTATCTATAAGAATCGCTATCAATAAGCATACATCAATGTTCTTAGTC
AAATTACTCAATTTTTTTATGAGATAGATGTTTTTTTTGCTCAGGAGGGC
TTACTTTTAAAGAATATGTGTGTTTCGACATGAAATTTTGGTTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGC
CCGATTTTCAAAAAAAAAATTTTGGGGCAAATTTGGGCCAAAAAACGGCT
AAAAAATGGGTCTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTC
TGATTTTTTGCAGGAAAGTAAGGTACCATCATAGGTAAAAGATGGTTCAA
GCGGATTAAATTTTTGCAAAAAAAATTTTGTTGGCTCAAAAAACGCATGT
TTATCTATAAGAATCGCTATTAATAAGCATACATCAATGTTCTTAGTCAA
ATTACTCAATTTTTTTTATGAGATAGATGTTTTTTTTGCTCATCAGGGCT
TACTTTTAAAGAATATATGTGTTTAGACATGAAATTTTGTTTTCTTGGCT
TGTTTTTTATAGAAAAACTGGTCAAATTCGATATTTTTCTATAAGCACAC
TATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCTT
TATGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGTGGCGG
AGCTCGATTTTTGGGAAAAAAATTTTGGGGTAAATTTCAGCTAAAAAACG
GCTTGTTATTTTCTGACTTTTTGCATGCAAGTAGGTAAAAAATGGCTCAA
GCAAATTTTTGTAAAAAAAGGATTTTTCAGCTCAAAAAACGCATATTTAT
TTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAAAATTACTG
AATTTTTTGATGAGATATGTTTTTTTGCTCTCGATGTTTTGAATATGAAA
GAATATTTCAAGAGCATGAAATTTTGGTCTTATTCTAAACGTGTTTTTTA
TAAGAAACAAACGACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAA
TGATTGTTTAATGGTCACGCTTATGTAGATATCAATTATATATGTGTTAA
ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTGGCTTTTAAATC
ATGTTCAATTTAACAGGGTTGCCCTTCATTTAGAGCTGCTTAAGCAAAAC
AAATCAGTGTTCAAAATCCCACCGTCTCAGACAGATTACCATCTTAGTGA
AATAAATAAAGAGTCTTCCGTCTCAAAATTCTGTATAATTTACTGAAATT
CCAAGATTATGTGCTAAATTTTTATGTAAAATCCGTTATCTGTCTCAGAT
GAACAACCCTGGTTTGACAACTGACAAATGCAGTATTGNTTATGTAAAAT
CCGTTATCTGTCTCAGATGAACAACCTTGGTTTGACCACTGACAAATGCA
GTATTGATTTCTTAATTATCATTCTTGAAAACCTTTTTTCAGTTGCCATA
GATGAAGATGATGATGATGATATGTTAAATCCTGGTGGTTTTGGTGCCAA
TGTTCCTGGTGACCAACGTGAACAAGATAATCCTGATTCTACACCTTTCA
ATAAATATGCTGTTCAAGTGAGAACTAATATAATAGATTTTTTTCCTATT
CACATAGCACTAACTGTCCTGTGTTTTTTCAACGTTGAAATCGATAACAG
TGTTGTTTGTCCCATTAAATTGCTTGAAAAAGGTACTTTCATACTTCAAG
CCACTAAAAATCTCAAAGGAAACTCAGGCAAAGTATTGCTACAGCCGGCG
ATAAGCTTTAATTTCCGATTTTTGAAAACTCAATCATTGATTTTGTACTA
TTGTCATCACAAATTATATACATTGATGTTCTCAATATATTTCAACATTT
CAAAACATTGGGAAATATTTAGTTTATTATTTGATATCTTCTCCTTCTTC
TTTAGAATGAAAACAAAAGAGCCAGACCAAGACCTTCAGTCAAAGGTGGA
CGACAATTACCCAAACCACCAGGTACCGCCACATCCACCACCACCACAAC
CACAAACAATGGGGTGGCTGATGAACCTATTGTCTTTTATAGTGAAGATA
ATGAGTTTGCATTCAAAAATGAATGAGAGTGAAGGAGTATCATTTTCTCA
CTAGTGTTGCTCGTACTTTTCATTTTACTTTCCTTTCAAAAACGAAAATT
TCTTTTTTTCTAGTTGATTGTTGATATCAATAGATAAATACAGTCAATTG
ATTACGTAGGTAGCCCAGTAATCTAGAACTTTTAAGTCTTTCAATTGTTC
TTACGGGGCCTACGACCAGCTGGCTTAGCTTTCTGAGAACTGAACAGAAT
ATTGGAAGGAGTGGGGATTCGAACCGCGATCACAATCAGTTTTCCTTCTC
TTTTAAAGTCTCGTCAGTTTCATCTGGTTAATGGTTTCTTTTCTCCCGCC
CTCGAATTTCAAAGTAGTCAGACTCCTCACATTTCTTTGTAAAAATATTT
CTTAAAATTCACGTAAAGTGGCTACTCAAACTTGACCCTTTAGGGTAAAT
AAAGTTAATTTTTTTAATTTTCTCCATATATAGTACCTATGGAAAATGGC
CGGTTCATTATTTTAGCGTTATTCGTATTTACCCGTTTAGCTCATTTTTA
TGTTTGTTTATGTTTTTTTTTCGGCGTTTCGGGTTTTATCTTTTATACAA
AATTTTATTTCTAAAAATTCTTTCTTTGCTTTTAATGAGCAAAATTTCGT
TGTAATTGAAATTTTTCCTTTTCTTTTTGTATTTATATATATTTTCAATT
GTTTTTGCTTTAATGTACATAGTACCTTTTCGATACACCATATTTTTTAC
TAAAATACCTTTCTAACTTCGTTTAACTTTTGAATGAATATATCACCTTA
TATTTCGCCAATTATTTTGAAAAAAGACTGAATTTCTATTGTTGTTTCTT
TCTAGGGATATTTAGAAAAAAAAATCAAAAAAGTTGAATTTTGTGGGGCT
CAATATTTTGTTTTGAAAGGTAAGGTGAACCGACTTGTTCCAATATTTTC
ACACATTATTCATAAAAATACCATATCATTTTCATTCTAGACATTTAGTT
TTAGGTATAAGTAATAATTATATTATTATTATTATTTTTGGAGAATTTAA
TTTATTTCTTTGTTTTATGTTTGTTTTAAGAAAAAATATTATTTGTGATA
GCCCCCCCCTATAAAATAGCTTGTAAATTATAGAAAAACCTCATTTAAGT
ACGTCGCTTTAGATTTTTTTTATCATAAAGTTTTTGTTTTAAATTTTTCC
CTCTATATAATTCAACATTTTATTCAGTCCGAAAAAATATG Coding sequence (CDS) from alignment at scaffold_201:224476..230766- >TCONS_00051405 ID=TCONS_00051405|Name=TCONS_00051405|organism=Clytia hemisphaerica|type=CDS|length=8316bp|location=Sequence derived from alignment at scaffold_201:224476..230766- (Clytia hemisphaerica)
AATGAAAACAAAAGAGCCAGACCAAGACCTTCAGTCAAAGGTGGACGACA
ATTACCCAAACCACCAGGTACCGCCACATCCACCACCACCACAACCACAA
ACAATGGGGTGGCTGATGAACCTATTGTCTTTTATAGTGAAGATAATGAG
TTTGCATTCAAAAATGAATGATTGCCATAGATGAAGATGATGATGATGAT
ATGTTAAATCCTGGTGGTTTTGGTGCCAATGTTCCTGGTGACCAACGTGA
ACAAGATAATCCTGATTCTACACCTTTCAATAAATATGCTGTTCAATATG
ACATCGTCAGAATCAACATTCAATCTTCTTGGAGATGACGAGGACGAAGA
ACCTCCAAGAACCACTGACTTGTCAACAAGGAAAAAGTTTGGAAAAATGG
CAAAGAAATTTTCACGAAACAAATCAAGCGGAAAACCTGCACCTCTTAGA
TCACCAGGAAGCTATGATGGCATCTGGAAGTGCAGCTACTCCACCTGCAG
CTTCAGTGGGTAGTGGTGGTGCCCGTCCTCGAACTACACCAACACAAGAA
GACGCACAATTTCGTCAAAAATTACGACACATGGGAAAATATGACGTCTA
GGCAACTCTCAGTGCATAACCAGAATGGATCTAGAAGGTCTCCTGACCAA
TCAGATTCCTCAACCATATCACACTCCTCACCTGGGCACAGAACACATGC
TCCACGGTCAACCACCAGCCAACGAAGAACCACATCCAAACCACTTAACT
TTCAACAAGCAATGAGTGATTTCCGTACCATGTTTCCAGAATTGGATACA
GACGTTATTGAAACTGTTTTAAGAGCAAATAATGGTGTTGTTCAAACTAC
AATAGACCAATTGCTTCAATTACAAGAATCTACGCAGGTTGAGAAAGCAC
AATCCGGACCTGTTTTACCAAGTTATGAAAGCTCTATCGGTGATGGGGAA
GAGCCACCCCCTGCTTATAACGACATTTGGGAGGACATAGGACCCCCAGA
GCCTGATCCATTATTTCCAAATCCAAAAGTGAATGCAAAAATTCAATCAC
AACAAACTATTGCAGTTGAAAAGCCAAAGAAATTTCCCAGAAATGCTTTA
TGGAATGCTCCACTTGTTGGGAAATTACCAAATGACTTTTTGCGAATCGA
TAATATTGTTTCTACTAATAACTCAAATGCTTTGACTGCTGATTCTAGGG
AACAAAGCAATTACATGAACTTGAATAATAAGGATTGTAAACCAAAACAT
AATGAGAAAGACTTTATGACAGATGATGACTTGGAGAGGTTTATGGAGGA
CGAAAAACTTGCTATCTTTCTACAGAACGAAGAATTTCTTAGAGAGCTGC
GTAGGAATAGAGAGTTTGTATCATCACTTGAAGCAGAATGAAAACAAAAG
AGCCAGACCAAGACCTTCAGTCAAAGGTGGACGACAATTACCCAAACCAC
CAGGTACCGCCACATCCACCACCACCACAACCACAAACAATGGGGTGGCT
GATGAACCTATTGTCTTTTATAGTGAAGATAATGAGTTTGCATTCAAAAA
TGAATGATTGCCATAGATGAAGATGATGATGATGATATGTTAAATCCTGG
TGGTTTTGGTGCCAATGTTCCTGGTGACCAACGTGAACAAGATAATCCTG
ATTCTACACCTTTCAATAAATATGCTGTTCAATATGACATCGTCAGAATC
AACATTCAATCTTCTTGGAGATGACGAGGACGAAGAACCTCCAAGAACCA
CTGACTTGTCAACAAGGAAAAAGTTTGGAAAAATGGCAAAGAAATTTTCA
CGAAACAAATCAAGCGGAAAACCTGCACCTCTTAGATCACCAGGAAGCTA
TGATGGCATCTGGAAGTGCAGCTACTCCACCTGCAGCTTCAGTGGGTAGT
GGTGGTGCCCGTCCTCGAACTACACCAACACAAGAAGACGCACAATTTCG
TCAAAAATTACGACACATGGGAAAATATGACGTCTAGGCAACTCTCAGTG
CATAACCAGAATGGATCTAGAAGGTCTCCTGACCAATCAGATTCCTCAAC
CATATCACACTCCTCACCTGGGCACAGAACACATGCTCCACGGTCAACCA
CCAGCCAACGAAGAACCACATCCAAACCACTTAACTTTCAACAAGCAATG
AGTGATTTCCGTACCATGTTTCCAGAATTGGATACAGACGTTATTGAAAC
TGTTTTAAGAGCAAATAATGGTGTTGTTCAAACTACAATAGACCAATTGC
TTCAATTACAAGAATCTACGCAGGTTGAGAAAGCACAATCCGGACCTGTT
TTACCAAGTTATGAAAGCTCTATCGGTGATGGGGAAGAGCCACCCCCTGC
TTATAACGACATTTGGGAGGACATAGGACCCCCAGAGCCTGATCCATTAT
TTCCAAATCCAAAAGTGAATGCAAAAATTCAATCACAACAAACTATTGCA
GTTGAAAAGCCAAAGAAATTTCCCAGAAATGCTTTATGGAATGCTCCACT
TGTTGGGAAATTACCAAATGACTTTTTGCGAATCGATAATATTGTTTCTA
CTAATAACTCAAATGCTTTGACTGCTGATTCTAGGGAACAAAGCAATTAC
ATGAACTTGAATAATAAGGATTGTAAACCAAAACATAATGAGAAAGACTT
TATGACAGATGATGACTTGGAGAGGTTTATGGAGGACGAAAAACTTGCTA
TCTTTCTACAGAACGAAGAATTTCTTAGAGAGCTGCGTAGGAATAGAGAG
TTTGTATCATCACTTGAAGCAGAATGAAAACAAAAGAGCCAGACCAAGAC
CTTCAGTCAAAGGTGGACGACAATTACCCAAACCACCAGGTACCGCCACA
TCCACCACCACCACAACCACAAACAATGGGGTGGCTGATGAACCTATTGT
CTTTTATAGTGAAGATAATGAGTTTGCATTCAAAAATGAATGATTGCCAT
AGATGAAGATGATGATGATGATATGTTAAATCCTGGTGGTTTTGGTGCCA
ATGTTCCTGGTGACCAACGTGAACAAGATAATCCTGATTCTACACCTTTC
AATAAATATGCTGTTCAATATGACATCGTCAGAATCAACATTCAATCTTC
TTGGAGATGACGAGGACGAAGAACCTCCAAGAACCACTGACTTGTCAACA
AGGAAAAAGTTTGGAAAAATGGCAAAGAAATTTTCACGAAACAAATCAAG
CGGAAAACCTGCACCTCTTAGATCACCAGGAAGCTATGATGGCATCTGGA
AGTGCAGCTACTCCACCTGCAGCTTCAGTGGGTAGTGGTGGTGCCCGTCC
TCGAACTACACCAACACAAGAAGACGCACAATTTCGTCAAAAATTACGAC
ACATGGGAAAATATGACGTCTAGGCAACTCTCAGTGCATAACCAGAATGG
ATCTAGAAGGTCTCCTGACCAATCAGATTCCTCAACCATATCACACTCCT
CACCTGGGCACAGAACACATGCTCCACGGTCAACCACCAGCCAACGAAGA
ACCACATCCAAACCACTTAACTTTCAACAAGCAATGAGTGATTTCCGTAC
CATGTTTCCAGAATTGGATACAGACGTTATTGAAACTGTTTTAAGAGCAA
ATAATGGTGTTGTTCAAACTACAATAGACCAATTGCTTCAATTACAAGAA
TCTACGCAGGTTGAGAAAGCACAATCCGGACCTGTTTTACCAAGTTATGA
AAGCTCTATCGGTGATGGGGAAGAGCCACCCCCTGCTTATAACGACATTT
GGGAGGACATAGGACCCCCAGAGCCTGATCCATTATTTCCAAATCCAAAA
GTGAATGCAAAAATTCAATCACAACAAACTATTGCAGTTGAAAAGCCAAA
GAAATTTCCCAGAAATGCTTTATGGAATGCTCCACTTGTTGGGAAATTAC
CAAATGACTTTTTGCGAATCGATAATATTGTTTCTACTAATAACTCAAAT
GCTTTGACTGCTGATTCTAGGGAACAAAGCAATTACATGAACTTGAATAA
TAAGGATTGTAAACCAAAACATAATGAGAAAGACTTTATGACAGATGATG
ACTTGGAGAGGTTTATGGAGGACGAAAAACTTGCTATCTTTCTACAGAAC
GAAGAATTTCTTAGAGAGCTGCGTAGGAATAGAGAGTTTGTATCATCACT
TGAAGCAGAATGAAAACAAAAGAGCCAGACCAAGACCTTCAGTCAAAGGT
GGACGACAATTACCCAAACCACCAGGTACCGCCACATCCACCACCACCAC
AACCACAAACAATGGGGTGGCTGATGAACCTATTGTCTTTTATAGTGAAG
ATAATGAGTTTGCATTCAAAAATGAATGATTGCCATAGATGAAGATGATG
ATGATGATATGTTAAATCCTGGTGGTTTTGGTGCCAATGTTCCTGGTGAC
CAACGTGAACAAGATAATCCTGATTCTACACCTTTCAATAAATATGCTGT
TCAATATGACATCGTCAGAATCAACATTCAATCTTCTTGGAGATGACGAG
GACGAAGAACCTCCAAGAACCACTGACTTGTCAACAAGGAAAAAGTTTGG
AAAAATGGCAAAGAAATTTTCACGAAACAAATCAAGCGGAAAACCTGCAC
CTCTTAGATCACCAGGAAGCTATGATGGCATCTGGAAGTGCAGCTACTCC
ACCTGCAGCTTCAGTGGGTAGTGGTGGTGCCCGTCCTCGAACTACACCAA
CACAAGAAGACGCACAATTTCGTCAAAAATTACGACACATGGGAAAATAT
GACGTCTAGGCAACTCTCAGTGCATAACCAGAATGGATCTAGAAGGTCTC
CTGACCAATCAGATTCCTCAACCATATCACACTCCTCACCTGGGCACAGA
ACACATGCTCCACGGTCAACCACCAGCCAACGAAGAACCACATCCAAACC
ACTTAACTTTCAACAAGCAATGAGTGATTTCCGTACCATGTTTCCAGAAT
TGGATACAGACGTTATTGAAACTGTTTTAAGAGCAAATAATGGTGTTGTT
CAAACTACAATAGACCAATTGCTTCAATTACAAGAATCTACGCAGGTTGA
GAAAGCACAATCCGGACCTGTTTTACCAAGTTATGAAAGCTCTATCGGTG
ATGGGGAAGAGCCACCCCCTGCTTATAACGACATTTGGGAGGACATAGGA
CCCCCAGAGCCTGATCCATTATTTCCAAATCCAAAAGTGAATGCAAAAAT
TCAATCACAACAAACTATTGCAGTTGAAAAGCCAAAGAAATTTCCCAGAA
ATGCTTTATGGAATGCTCCACTTGTTGGGAAATTACCAAATGACTTTTTG
CGAATCGATAATATTGTTTCTACTAATAACTCAAATGCTTTGACTGCTGA
TTCTAGGGAACAAAGCAATTACATGAACTTGAATAATAAGGATTGTAAAC
CAAAACATAATGAGAAAGACTTTATGACAGATGATGACTTGGAGAGGTTT
ATGGAGGACGAAAAACTTGCTATCTTTCTACAGAACGAAGAATTTCTTAG
AGAGCTGCGTAGGAATAGAGAGTTTGTATCATCACTTGAAGCAGAATGAA
AACAAAAGAGCCAGACCAAGACCTTCAGTCAAAGGTGGACGACAATTACC
CAAACCACCAGGTACCGCCACATCCACCACCACCACAACCACAAACAATG
GGGTGGCTGATGAACCTATTGTCTTTTATAGTGAAGATAATGAGTTTGCA
TTCAAAAATGAATGATTGCCATAGATGAAGATGATGATGATGATATGTTA
AATCCTGGTGGTTTTGGTGCCAATGTTCCTGGTGACCAACGTGAACAAGA
TAATCCTGATTCTACACCTTTCAATAAATATGCTGTTCAATATGACATCG
TCAGAATCAACATTCAATCTTCTTGGAGATGACGAGGACGAAGAACCTCC
AAGAACCACTGACTTGTCAACAAGGAAAAAGTTTGGAAAAATGGCAAAGA
AATTTTCACGAAACAAATCAAGCGGAAAACCTGCACCTCTTAGATCACCA
GGAAGCTATGATGGCATCTGGAAGTGCAGCTACTCCACCTGCAGCTTCAG
TGGGTAGTGGTGGTGCCCGTCCTCGAACTACACCAACACAAGAAGACGCA
CAATTTCGTCAAAAATTACGACACATGGGAAAATATGACGTCTAGGCAAC
TCTCAGTGCATAACCAGAATGGATCTAGAAGGTCTCCTGACCAATCAGAT
TCCTCAACCATATCACACTCCTCACCTGGGCACAGAACACATGCTCCACG
GTCAACCACCAGCCAACGAAGAACCACATCCAAACCACTTAACTTTCAAC
AAGCAATGAGTGATTTCCGTACCATGTTTCCAGAATTGGATACAGACGTT
ATTGAAACTGTTTTAAGAGCAAATAATGGTGTTGTTCAAACTACAATAGA
CCAATTGCTTCAATTACAAGAATCTACGCAGGTTGAGAAAGCACAATCCG
GACCTGTTTTACCAAGTTATGAAAGCTCTATCGGTGATGGGGAAGAGCCA
CCCCCTGCTTATAACGACATTTGGGAGGACATAGGACCCCCAGAGCCTGA
TCCATTATTTCCAAATCCAAAAGTGAATGCAAAAATTCAATCACAACAAA
CTATTGCAGTTGAAAAGCCAAAGAAATTTCCCAGAAATGCTTTATGGAAT
GCTCCACTTGTTGGGAAATTACCAAATGACTTTTTGCGAATCGATAATAT
TGTTTCTACTAATAACTCAAATGCTTTGACTGCTGATTCTAGGGAACAAA
GCAATTACATGAACTTGAATAATAAGGATTGTAAACCAAAACATAATGAG
AAAGACTTTATGACAGATGATGACTTGGAGAGGTTTATGGAGGACGAAAA
ACTTGCTATCTTTCTACAGAACGAAGAATTTCTTAGAGAGCTGCGTAGGA
ATAGAGAGTTTGTATCATCACTTGAAGCAGAATGAAAACAAAAGAGCCAG
ACCAAGACCTTCAGTCAAAGGTGGACGACAATTACCCAAACCACCAGGTA
CCGCCACATCCACCACCACCACAACCACAAACAATGGGGTGGCTGATGAA
CCTATTGTCTTTTATAGTGAAGATAATGAGTTTGCATTCAAAAATGAATG
ATTGCCATAGATGAAGATGATGATGATGATATGTTAAATCCTGGTGGTTT
TGGTGCCAATGTTCCTGGTGACCAACGTGAACAAGATAATCCTGATTCTA
CACCTTTCAATAAATATGCTGTTCAATATGACATCGTCAGAATCAACATT
CAATCTTCTTGGAGATGACGAGGACGAAGAACCTCCAAGAACCACTGACT
TGTCAACAAGGAAAAAGTTTGGAAAAATGGCAAAGAAATTTTCACGAAAC
AAATCAAGCGGAAAACCTGCACCTCTTAGATCACCAGGAAGCTATGATGG
CATCTGGAAGTGCAGCTACTCCACCTGCAGCTTCAGTGGGTAGTGGTGGT
GCCCGTCCTCGAACTACACCAACACAAGAAGACGCACAATTTCGTCAAAA
ATTACGACACATGGGAAAATATGACGTCTAGGCAACTCTCAGTGCATAAC
CAGAATGGATCTAGAAGGTCTCCTGACCAATCAGATTCCTCAACCATATC
ACACTCCTCACCTGGGCACAGAACACATGCTCCACGGTCAACCACCAGCC
AACGAAGAACCACATCCAAACCACTTAACTTTCAACAAGCAATGAGTGAT
TTCCGTACCATGTTTCCAGAATTGGATACAGACGTTATTGAAACTGTTTT
AAGAGCAAATAATGGTGTTGTTCAAACTACAATAGACCAATTGCTTCAAT
TACAAGAATCTACGCAGGTTGAGAAAGCACAATCCGGACCTGTTTTACCA
AGTTATGAAAGCTCTATCGGTGATGGGGAAGAGCCACCCCCTGCTTATAA
CGACATTTGGGAGGACATAGGACCCCCAGAGCCTGATCCATTATTTCCAA
ATCCAAAAGTGAATGCAAAAATTCAATCACAACAAACTATTGCAGTTGAA
AAGCCAAAGAAATTTCCCAGAAATGCTTTATGGAATGCTCCACTTGTTGG
GAAATTACCAAATGACTTTTTGCGAATCGATAATATTGTTTCTACTAATA
ACTCAAATGCTTTGACTGCTGATTCTAGGGAACAAAGCAATTACATGAAC
TTGAATAATAAGGATTGTAAACCAAAACATAATGAGAAAGACTTTATGAC
AGATGATGACTTGGAGAGGTTTATGGAGGACGAAAAACTTGCTATCTTTC
TACAGAACGAAGAATTTCTTAGAGAGCTGCGTAGGAATAGAGAGTTTGTA
TCATCACTTGAAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051405-exon-scaffold_201-1575043694:229839..230766 | TCONS_00051405-exon-scaffold_201-1575043694:229839..230766 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1575043694:229480..229620 | TCONS_00051405-exon-scaffold_201-1575043694:229480..229620 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1575043694:229114..229189 | TCONS_00051405-exon-scaffold_201-1575043694:229114..229189 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1575043694:228703..228779 | TCONS_00051405-exon-scaffold_201-1575043694:228703..228779 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1575043694:226200..226324 | TCONS_00051405-exon-scaffold_201-1575043694:226200..226324 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1575043694:224476..225861 | TCONS_00051405-exon-scaffold_201-1575043694:224476..225861 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1510915933:229839..230766 | TCONS_00051405-exon-scaffold_201-1510915933:229839..230766 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1510915933:229480..229620 | TCONS_00051405-exon-scaffold_201-1510915933:229480..229620 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1510915933:229114..229189 | TCONS_00051405-exon-scaffold_201-1510915933:229114..229189 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1510915933:228703..228779 | TCONS_00051405-exon-scaffold_201-1510915933:228703..228779 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1510915933:226200..226324 | TCONS_00051405-exon-scaffold_201-1510915933:226200..226324 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1510915933:224476..225861 | TCONS_00051405-exon-scaffold_201-1510915933:224476..225861 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1491911889:229839..230766 | TCONS_00051405-exon-scaffold_201-1491911889:229839..230766 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1491911889:229480..229620 | TCONS_00051405-exon-scaffold_201-1491911889:229480..229620 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1491911889:229114..229189 | TCONS_00051405-exon-scaffold_201-1491911889:229114..229189 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1491911889:228703..228779 | TCONS_00051405-exon-scaffold_201-1491911889:228703..228779 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1491911889:226200..226324 | TCONS_00051405-exon-scaffold_201-1491911889:226200..226324 | Clytia hemisphaerica | exon |
| TCONS_00051405-exon-scaffold_201-1491911889:224476..225861 | TCONS_00051405-exon-scaffold_201-1491911889:224476..225861 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:224476..230766 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00051405 vs. Swiss-Prot (Human)
Match: CUED1 (CUE domain-containing protein 1 OS=Homo sapiens GN=CUEDC1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.877e-24 Identity = 116/331 (35.05%), Postives = 161/331 (48.64%), Query Frame = 1
Query: 286 LNFQQAMSDFRTMFPELDTDVIETVLRANNGVVQTTIDQLLQLQESTQVEKAQSGPVLPSYESSIGDGEE--PPPAYNDIWE-DIGPPEPDPLFPNPKVNAKIQSQQ-------------TIAVEKPKKFPRNALWNAPLVGKLPNDFLRI-----DNIVSTNNSNALTADSREQSNYMNLNNKDCKPK-HNEKDFMTDDDLERFMEDEKLAIFLQXXXXXXXXXXXXXXVSSLEADH-----QEXXXXXXXXXXXXXXXXXXXXXRPRTTPTQEDAQFRQKLRHMGKSTRKKFGKMAKKFS---RNKSSGKPAPL---SMTSSESTFNLL 1179
L F QAM DF+TMFP +D D+IE VLRAN+G V TIDQLLQ+ SG V YE S D E+ PP E D EP P++ P + + + + P R WN PL+G LP+DFLRI D+I N+ S E C P + ++++EDE++A+FLQNEEF++EL+RNR+F+ +LE D Q++ +S + S G EDA FR KL+HMGKSTR+K ++A+ FS + + S + L S+ ++ ST NLL
Sbjct: 45 LEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLEG---GGSSGGV---YEDS-SDSEDSIPPEILERTLEPDSSDEEPPPVYSPPAYHMHVFDRPYPLAPPTPPPRIDALGSGAPTSQRRYRNWNPPLLGNLPDDFLRILPQQLDSI--QGNAGGPKPGSGE----------GCPPAMAGPGPGDQESRWKQYLEDERIALFLQNEEFMKELQRNRDFLLALERDRLKYESQKSKSSSVAVGNDFGFSSPVPGTGDANPAVSEDALFRDKLKHMGKSTRRKLFELARAFSEKTKMRKSKRKHLLKHQSLGAAASTANLL 356
The following BLAST results are available for this feature:
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