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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051389 ID=TCONS_00051389|Name=TCONS_00051389|organism=Clytia hemisphaerica|type=transcript|length=2494bp
ATGATTATTACCCAAAACTTATGAAAGTAACTCCATGGTTTTAGTTGAGT
ATTTTGGCCAGTAAATTGAGATCAGCTAATAGGTTTTTGTTTTactcatt
ctagatttttgaatataaaatttatgaaattaacAGATAGAAACGTGACA
AAATACTTTAATTACACTAGGTAAATACTACAGTTCATCTAAgctaatat
tttcaaaaatagtgGTTTCTGAATTAATTCGGTATAGTTCCTCAAGACCA
TGTTTagattgaatgaaaatttctttgactTCATTCATTGCCATTTTTCT
TGCTTCCCTGTTTGCTGCACGCTTCAAAACAAGGTCAAGTTCAACTTCAT
TCAGCTTGCAAACTTTTATTGTATAGCCTTTCCTTTTTAAACGTATCATA
TAATCTATCAGTTCCTCATATTGTACACACGTTCCCTCTGCCACAAAACT
AAGTTGGTTCTCAAGAAGCCAGTCTGTTAAGATGATTGCAATCTGACGTG
CTCTTGgataaaatttatttacttCCATTTTACTAAATCCTGGTAGCTGC
TCCATGATTTCATCAGTGTCAACATATGCATATTTTCCATAGGTTTTGTG
GGgaagaattttgttttgaataaaggTAGTCTTGCCTGATCCCATGGGAC
CTAACACAAATAAAGCATCTTTATAGTATTGAATGGAACCTGACCTTCTG
TAAAATGtcttatatttttcaatgagTTGGTTATTGTCTTTTTGCAATGG
ACACATTTCTTTTGATGAATAGAATCGTTTATGAATGTAGTGGTTTCTAC
TTAAACATTTGTTATTGGTGGGTCTATATGCAGCTTCACATCTCAAGTTT
CTTTTTTGAACCATACAAACAACAGCAAAGTTGAACACATAAAATAGTTT
TGGTTGATTAGTTGAAGCAACATGATTAGCACATAACAACAAAGCTGGAA
GTTGAATTCTTTGAAAACCTCTATTAAAACTGGATGAGAGAATTGGAGCA
AGGAGAACCATAGGTGTGATTCCTTTGTTATTCAGTTTACTGTTAAATTT
CAGAagaatttgaatcaaaatttcTATGAATGAAAAATTAGAACATAAAA
TATTCATAACATGTATaataaaaggaaagaaatttgtATGTATTCATCAG
TAGCAGCTCAAATTAAAAGGCAAATCAAAGCTTATACATAAGTAATAggt
gaaatcaaagaaaactaTCTAATAAACATTTCTAATAATGGtaataaaaa
tgaataattCACTTTCTCATCATTTCGTTCGTTGGTGTTGGTGCTAAAAA
AAGAGCTTATGCTTTGAAGCCTCAGTCTCAGAACCTCTGGAGACATAGAT
AAAATTGACAACTTCAAAGTAATTAATagggaaaaataaatacaaaccCC
TTGAAAGCTACACTAGACGAATCTTGTCTGACTTGATGCTGGTTTCCAGT
AGGTACTGCAAGTGCAGGTCCGCAAGTGCAAGTGCAAATGCAAATGCAAA
TCATCTTTCTCAAATCCGATTTTGAATCCGACAATTACAAACAATTCGTA
ATCGGGAAAACGGAATACgaaaataacaacaaatatGGCGGCATGATGAG
GTGAAAGTTTCGAAAATTCAAATCGAGAATGAGCCTTTTATGGACAGTTT
TGGTATATTGCTTGAAGGTTTTACCGACAGCCTTATGTGCTTATGCTAGT
GATTTATCATTGATTCATGGGCCTCCAAAATTTATGCAAAAGTTTCagtt
ttcaaaggcaattttaGATAATGTTTTGGGTCATGGTTTGGTAGCGTTTT
TTTTGTGGCTTGCTGTTCTTGATTACAATTTATCAAACCGATGGCATTGT
TTTGAATGTTTCCTTAGCTTTTTCATTGGTTCTGTAATAGACATCGATCA
TTTTATTATGGCTAGGTCTTTGAATTTGCATaaCGCATTGAATTTATCAA
GTCGCCCGATGTTTCACAACACGAGTCTTCTCGTTTTATTTCTACCCATC
CACATTTTTATATGGAGCCTAAAGAACAAAGATGAATGGTATCACAATTT
GCTGTTGATATGCGAGACGGCGATCTTGTCACATCATATAAGGGACGCTA
ACCGTCGGGGAATGTGGCTTTGGCCTTTTGGTAACACACCACCGATCCGT
CCAAGCTGGATTTACATTTCATTGATCGCTATTCTCCCGATCGCTGTGTG
GTAtgtcaaaaaacttttgaagaaaaggCTTTTCGAAAGCCCAAGAGTTA
TAGACCTTGTataaattgtttcaaatttagttcaaaatatttatttgcca
TAAGTTGATAGGTTTTTTCTGATATAAagttcaatttatattttttatat
tgtaGAGTAGATAGATAATATGTTCtttcaatgggcttttccagaaaaaa
attgaacatggggtggaggatataataattttcagcgatttacccccgga
caaagtgacttttggcccccggacaacgggttttaccccccaaa Run BLAST on NCBI transcript from alignment at scaffold_201:464292..468700+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051389 ID=TCONS_00051389|Name=TCONS_00051389|organism=Clytia hemisphaerica|type=transcript|length=4409bp|location=Sequence derived from alignment at scaffold_201:464292..468700+ (Clytia hemisphaerica)
ATGATTATTACCCAAAACTTATGAAAGTAACTCCATGGTTTTAGTTGAGT
ATTTTGGCCAGTAAATTGAGATCAGCTAATAGGTTTTTGTTTTactcatt
ctagatttttgaatataaaatttatgaaattaacAGATAGAAACGTGACA
AAATACTTTAATTACACTAGGTAAATACTACAGTTCATCTAAgctaatat
tttcaaaaatagtgGTTTCTGAATTAATTCGGTATAGTTCCTCAAGACCA
TGTTTagattgaatgaaaatttctttgactTCATTCATTGCCATTTTTCT
TGCTTCCCTGTTTGCTGCACGCTTCAAAACAAGGTCAAGTTCAACTTCAT
TCAGCTTGCAAACTTTTATTGTATAGCCTTTCCTTTTTAAACGTATCATA
TAATCTATCAGTTCCTCATATTGTACACACGTTCCCTCTGCCACAAAACT
AAGTTGGTTCTCAAGAAGCCAGTCTGTTAAGATGATTGCAATCTGACGTG
CTCTTGgataaaatttatttacttCCATTTTACTAAATCCTGGTAGCTGC
TCCATGATTTCATCAGTGTCAACATATGCATATTTTCCATAGGTTTTGTG
GGgaagaattttgttttgaataaaggTAGTCTTGCCTGATCCCATGGGAC
CTAACACAAATAAAGCATCTTTATAGTATTGAATGGAACCTGACCTTCTG
TAAAATGtcttatatttttcaatgagTTGGTTATTGTCTTTTTGCAATGG
ACACATTTCTTTTGATGAATAGAATCGTTTATGAATGTAGTGGTTTCTAC
TTAAACATTTGTTATTGGTGGGTCTATATGCAGCTTCACATCTCAAGTTT
CTTTTTTGAACCATACAAACAACAGCAAAGTTGAACACATAAAATAGTTT
TGGTTGATTAGTTGAAGCAACATGATTAGCACATAACAACAAAGCTGGAA
GTTGAATTCTTTGAAAACCTCTATTAAAACTGGATGAGAGAATTGGAGCA
AGGAGAACCATAGGTGTGATTCCTTTGTTATTCAGTTTACTGTTAAATTT
CAGAagaatttgaatcaaaatttcTATGAATGAAAAATTAGAACATAAAA
TATTCATAACATGTATaataaaaggaaagaaatttgtATGTATTCATCAG
TAGCAGCTCAAATTAAAAGGCAAATCAAAGCTTATACATAAGTAATAggt
gaaatcaaagaaaactaTCTAATAAACATTTCTAATAATGGtaataaaaa
tgaataattCACTTTCTCATCATTTCGTTCGTTGGTGTTGGTGCTAAAAA
AAGAGCTTATGCTTTGAAGCCTCAGTCTCAGAACCTCTGGAGACATAGAT
AAAATTGACAACTTCAAAGTAATTAATagggaaaaataaatacaaaccCC
TTGAAAGCTACACTAGACGAATCTTGTCTGACTTGATGCTGGTTTCCAGT
AGGTACTGCAAGTGCAGGTCCGCAAGTGCAAGTGCAAATGCAAATGCAAA
TCATCTTTCTCAAATCCGATTTTGAATCCGACAATTACAAACAATTCGTA
ATCGGGAAAACGGAATACgaaaataacaacaaatatGGCGGCATGATGAG
GTGAAAGTTTCGAAAATTCAAATCGAGAATGAGCCTTTTATGGACAGTTT
TGGTATATTGCTTGAAGGTTTTACCGACAGCCTTATGTGCTTATGCTAGT
GATTTATCATTGATTCATGGGCCTCCAAAATTTATGCAAAAGTTTCagtt
ttcaaaggcaattttaGATAATGTTTTGGGTCATGGTTTGGTAGCGTTTT
TTTTGTGGCTTGCTGTTCTTGATTACAATTTATCAAACCGATGGCATTGT
TTTGAATGTTTCCTTAGCTTTTTCATTGGTTCTGTAATAGACATCGATCA
TTTTATTATGGCTAGGTCTTTGAATTTGCATGTAAGTATATATTATAATG
ATATAAAAAGTTCGTCCgtaaaaaatttcgtcactttcaccAACTACTAC
CCTTCCCTTTGccaccgacgggggtgctccgctgaggttcgaaaaatgga
ccctacgtgggactcgttttttctaaaattttgccgaattttgcgaaaaa
agtgacccggAATGGGACTGtaagtccaaaattttctcaaattttctact
ttttcccaaaattctccaaaaaaggcactctacatgagggactgattttt
ctattttggtgtttttgcgaccctacctccTGGGACTCGTGGTGGGGTTA
AAAAAGGTACActgaccagcggcgcatccccgtaacccattttgccctag
taccacCACCAAGGTgggctatgtttctagaatttagccaggggctattt
tccttagccccccccccctaaaaaatGTTGGAGGCTGGActcctctgcac
actatgtaaatcgattgttttctgaaaacaatggaaagacaatacttcgc
tctccaccgtttatCGATGTtaatccagagtctctataataaatccatag
AAGTAGTAAATTCCATCACCAGTTATTTGGCACCTGGGAGTACTGTGGTT
TACTATGTAgtgtactttaatcgtagaaattttagcgagactaattttag
cgtatattagcgagtcaggaaaatcttgattttttttggatttattttag
cgaatcacgatttcaaaaaattacgcgtggataaattttagcggatagat
tttagcgatctgttagactggagtcgtttataatgcatgtaatactaata
ataccaatactactaataataatacgggatttagtttgtataaacgactg
gaagaatccggtgttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaacttgcgtagcgagaa
aacaatttatcaagcaacaacaaactctcaaaacgaaatcaactcaaatg
aaaaactttcaatacacaaatccacacaaattttttttctcgagaattat
tttgagcaggaaaaaattataatcgcaaatattgacacttttcttttgtt
tggagttagtgcgcaaaggtttctagacgactaaaattgttccattcatt
actttttgctttatttctactatgtatagattagtcgtctagcttgctag
actagcgatctgtcgattcggcgtgttttagcggatttattttagcgaaa
atagagAAAACTccctaaaacgctaaaattagtctcgctaaaatttctac
gattaaagtatgtgACGTTTCTCATTCCTCtgcggcaatgaattttgaaa
taagccgggtctgtgtacagatcAACTGTAGTTGTTGCCACTGCTTTTTT
CTGTATTGGAGGAATCCAGGAAACGTCTTTGATAATAAtaagtagtaagt
aagtatgttcatctggtggctgtcggcggagccgggagtgagggagtcta
tccccttttctatttgcgctagacctgggagatcgaatgctgaggtggag
cgccacacctactctcagctcccagtaacttaccgcctagatcagattac
ccaatctaagctactcattcgctgagttggcggtgaccggggatcgaacc
cacaacccttagattgtaaggcgaatgctctaccgactgagctacccggc
cacAAAAATAGATAATAATAAGAGTTGAGTTAAAGCCAGTGATATTCCCT
TTTCGGAAAGACCATACTGTAATAGctgttttccaatttttttcagaaCG
CATTGAATTTATCAAGTCGCCCGATGTTTCACAACACGAGTCTTCTCGTT
TTATTTCTACCCATCCACATTTTTATATGGAGCCTAAAGAACAAAGATGA
ATGGTATCACAATTTGCTGTTGATATGCGAGACGGCGATCTTGTCACATC
ATATAAGGGACGCTAACCGTCGGGGAATGTGGCTTTGGCCTTTTGGTAAC
ACACCACCGATCCGTCCAAGCTGGATTTACATTTCATTGATCGCTATTCT
CCCGATCGCTGTGTGGTAtgtcaaaaaacttttgaagaaaaggCTTTTCG
AAAGCCCAAGAGTTATAGACCTTGTataaattgtttcaaatttagttcaa
aatatttatttgccaTAAGTTGATAGGTTTTTTCTGATATAAagttcaat
ttatattttttatattgtaGAGTAGATAGATAATATGTTCtttcaatggg
cttttccagaaaaaaattgaacatggggtggaggatataataattttcag
cgatttacccccggacaaagtgacttttggcccccggacaacgggtttta
ccccccaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051389-exon-scaffold_201-1491911889:464292..466222 | TCONS_00051389-exon-scaffold_201-1491911889:464292..466222 | Clytia hemisphaerica | exon |
| TCONS_00051389-exon-scaffold_201-1510915933:464292..466222 | TCONS_00051389-exon-scaffold_201-1510915933:464292..466222 | Clytia hemisphaerica | exon |
| TCONS_00051389-exon-scaffold_201-1575043694:464292..466222 | TCONS_00051389-exon-scaffold_201-1575043694:464292..466222 | Clytia hemisphaerica | exon |
| TCONS_00051389-exon-scaffold_201-1491911889:468138..468700 | TCONS_00051389-exon-scaffold_201-1491911889:468138..468700 | Clytia hemisphaerica | exon |
| TCONS_00051389-exon-scaffold_201-1510915933:468138..468700 | TCONS_00051389-exon-scaffold_201-1510915933:468138..468700 | Clytia hemisphaerica | exon |
| TCONS_00051389-exon-scaffold_201-1575043694:468138..468700 | TCONS_00051389-exon-scaffold_201-1575043694:468138..468700 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:464292..468700 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016301 | kinase activity |
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0016301 |
kinase activity |
Blast
The following BLAST results are available for this feature:
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