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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051365 ID=TCONS_00051365|Name=TCONS_00051365|organism=Clytia hemisphaerica|type=transcript|length=2753bp
TGGAAGTCCGCTAATTGGAAGGAAAATGTTAGTTTTTGAATATTACGTAA
AAAAGAAAGTATCCGCAAATTGGAGTATCCGTTAAATGACTGTCCGcctt
tctaaaatttttttataaggatttgaCCTTTAAgaatgtccgctaattag
agttTCTACTGTACTTACAAATATTTCGGGCACAAGTGGGTCGTATTAAT
TAAGTACCCGTTAAAATGTATACATTTTGAACGCAAAGgtccagaaaaaa
atattattcttGTTCTAAATGTTATTACAGTATAAACCAAAAACTTCTTT
CTAAGCTTGTGCTGTCATTTCTGTTTCGTCATTGCCTTTCTTTGTAATTA
GATTATTCTGTTGCTTTTGTTGATTGcagaatttgatgaaaattacgACC
AATAGAACGATACTCCATGCTGTTGCCAACAGACCAAAGTACGTGAAAGT
AGCCTGTCCACCGTACCGACTGAAGACTTGTCCACCAACGATATTTGCTA
CAATAAAGCCAACCCCGAAATACGTAGTATTCATAATCGATAGCATAGTG
GTGTGAATTCGAGGGTCTGTATTCCTTTTGATGTACAAAACCTGTGTTAC
CAAGCCCAGACCGAAACCCAGGGTCTGCAACGTGTGGATCGGTATGGAAA
GCCATGGGTTGCTTATGAATGcgaatgctagaaaacgaacgACGTAAGAT
AAGCAAGCTAGACAAAGAGCATTCCAAGGTCCTCTCAACAATTTGATCAA
CTTAGCAGCCAGGTACATGACGGGTGCGGCACAAAAAGCGGCGAAGCCAA
TCGTTAATCCCACGAGAGTGGTGGACCCATTCAGCTCTTTTATTCTCAAG
GCTGTGAAGCCAATGTAGATACCTTGGAGTGTACCTAATACAAAGACTGT
AAGAAGGAATAAGATCATCTCGAANGCTCTTTTATTCTCAAGGCTGTGAA
GCCAATGTAGATACCTTGGAGTGTACCTAATACAAAGACTGTAAGAAGGA
ATAAGATCATCTCGAATTTTTTCAacgtttgaaaaatgatttctttTAAG
GGCGTTTCGTCGACATCGACTTCGGGCACTTTCTCTATTGTATTGCTCTT
GGATTCTTTAAAGGTTTTCAACTCGGAAGGTTCGGCAGCTTCATTTTCCT
CAGTCGATTCTCTGAACAAGAAAGGACTTGCTATCGCTAAACCAATCAAG
TACAAACTCAAAACCACAAACGCTCCAGTGAAACAGTTCACTTTGTCCGT
ATGCGGAAATACATCGGACAGCGATCCGGATAGAATGGAACCAACGGAAA
ATCCGatggctccaaacattcgattccATCCAAAATTCTTCTTCTTTGAT
GATTTGAGGATTCTTTTCACAACACCAGCATCCNCGGAAATACATCGGAC
AGCGATCCGGATAGAATGGAACCAACGGAAAATCCGatggctccaaacat
tcgattccATCCAAAATTCTTCTTCTTTGATGATTTGAGGATTCTTTTCA
CAACACCAGCATCCATCATGCTGACTAAACAACCGTCAAAGGCGGAAGCA
AAGATATTGATAAACAGAAGAACAAGGAATCGCGTAGAACGAAAATCGAT
ACTTGAATCGGATTGGTTGGTAGGAGATATTCCATTACTTGTTACGTTCA
CNAAGCCAATCGTTAATCCCACGAGAGTGGTGGACCCATTCAGCTCTTTT
ATTCTCAAGGCTGTGAAGCCAATGTAGATACCTTGGAGTGTACCTAATAC
AAAGACTGTAAGAAGGAATAAGATCATCTCGAACTTTTTTAGCGTTTGGA
AAACGATTTCTTTTAAGGGCGTTTCGTCGACATCGACTTCgggcactttt
tctattgtattGCTCTTGGATTCTTTAAAGGTTTTCAACTCGGAAGGTTC
GGCAGCTTCATTTTTCACAGTCGATTCTCTGAACAAGAAAGGACTCGCTA
TCGCTAAACCAATCAAGTACAAACTCAAAACCACAAACGCTCCAGCAAAA
CAGTTCACTTTATCTGTATACGGAAATACATCGGACAGCGATCCGGATAG
AATGGAACCAGCGGAAAATCCGatggctccaaacattcgattccATCCAA
AATTCTTCTTCTTTGATGATTTGAGGATTCTTTTCACAACACCAGCATCC
ATCATGCTGACTAAACAACCGTCAAAGGCGGAAGCAAAGATATTGATAAA
CAGAAGAACAAGGAATCGCGTAGAACGAAAATCGATACTTGAATCGGATT
GGTTGGTAGGAGATATTCCATTACTTGTTACGTTCACTTTCGTTTCAATA
ACAACTGGTGCAGGGCAAGTGTTTGTCGATTTATCTCCGATCACTAAAGA
CAACAAAGGTTGACCACCGACCAAAACTAATGACATAATCGTCATAATAA
TGACAATGAACACATGATTCTGTTGTTTGTCGGTTATGAAGCCCCATAAA
GGACCAGCAAAAGTCATCCCAAGTAGACGAAGACCTGTCACAAGACCAGC
TTCTGCTTTGTTCAATCCGACGCCAACGAGGAATGGTACCATGTATGGTT
TGAAAGCGCCGTCTATTCCAACCGTCAGGAAGAAGCATATTTTGGCCGGT
AACATGTACACATCCACTTTGAAAAGTTCTTTCAGTCGTTTGCCCGCCAt
ctcgtttttttttgtttttatgaatTGCAGCTGTAAAAGAAAAGGTTAAA
AATTATAAGTATCCAATTTACATTTCGaagtaggcttctgctcatcatCT
AGC Run BLAST on NCBI transcript from alignment at scaffold_201:11283..14035+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051365 ID=TCONS_00051365|Name=TCONS_00051365|organism=Clytia hemisphaerica|type=transcript|length=2753bp|location=Sequence derived from alignment at scaffold_201:11283..14035+ (Clytia hemisphaerica)
TGGAAGTCCGCTAATTGGAAGGAAAATGTTAGTTTTTGAATATTACGTAA
AAAAGAAAGTATCCGCAAATTGGAGTATCCGTTAAATGACTGTCCGcctt
tctaaaatttttttataaggatttgaCCTTTAAgaatgtccgctaattag
agttTCTACTGTACTTACAAATATTTCGGGCACAAGTGGGTCGTATTAAT
TAAGTACCCGTTAAAATGTATACATTTTGAACGCAAAGgtccagaaaaaa
atattattcttGTTCTAAATGTTATTACAGTATAAACCAAAAACTTCTTT
CTAAGCTTGTGCTGTCATTTCTGTTTCGTCATTGCCTTTCTTTGTAATTA
GATTATTCTGTTGCTTTTGTTGATTGcagaatttgatgaaaattacgACC
AATAGAACGATACTCCATGCTGTTGCCAACAGACCAAAGTACGTGAAAGT
AGCCTGTCCACCGTACCGACTGAAGACTTGTCCACCAACGATATTTGCTA
CAATAAAGCCAACCCCGAAATACGTAGTATTCATAATCGATAGCATAGTG
GTGTGAATTCGAGGGTCTGTATTCCTTTTGATGTACAAAACCTGTGTTAC
CAAGCCCAGACCGAAACCCAGGGTCTGCAACGTGTGGATCGGTATGGAAA
GCCATGGGTTGCTTATGAATGcgaatgctagaaaacgaacgACGTAAGAT
AAGCAAGCTAGACAAAGAGCATTCCAAGGTCCTCTCAACAATTTGATCAA
CTTAGCAGCCAGGTACATGACGGGTGCGGCACAAAAAGCGGCGAAGCCAA
TCGTTAATCCCACGAGAGTGGTGGACCCATTCAGCTCTTTTATTCTCAAG
GCTGTGAAGCCAATGTAGATACCTTGGAGTGTACCTAATACAAAGACTGT
AAGAAGGAATAAGATCATCTCGAANGCTCTTTTATTCTCAAGGCTGTGAA
GCCAATGTAGATACCTTGGAGTGTACCTAATACAAAGACTGTAAGAAGGA
ATAAGATCATCTCGAATTTTTTCAacgtttgaaaaatgatttctttTAAG
GGCGTTTCGTCGACATCGACTTCGGGCACTTTCTCTATTGTATTGCTCTT
GGATTCTTTAAAGGTTTTCAACTCGGAAGGTTCGGCAGCTTCATTTTCCT
CAGTCGATTCTCTGAACAAGAAAGGACTTGCTATCGCTAAACCAATCAAG
TACAAACTCAAAACCACAAACGCTCCAGTGAAACAGTTCACTTTGTCCGT
ATGCGGAAATACATCGGACAGCGATCCGGATAGAATGGAACCAACGGAAA
ATCCGatggctccaaacattcgattccATCCAAAATTCTTCTTCTTTGAT
GATTTGAGGATTCTTTTCACAACACCAGCATCCNCGGAAATACATCGGAC
AGCGATCCGGATAGAATGGAACCAACGGAAAATCCGatggctccaaacat
tcgattccATCCAAAATTCTTCTTCTTTGATGATTTGAGGATTCTTTTCA
CAACACCAGCATCCATCATGCTGACTAAACAACCGTCAAAGGCGGAAGCA
AAGATATTGATAAACAGAAGAACAAGGAATCGCGTAGAACGAAAATCGAT
ACTTGAATCGGATTGGTTGGTAGGAGATATTCCATTACTTGTTACGTTCA
CNAAGCCAATCGTTAATCCCACGAGAGTGGTGGACCCATTCAGCTCTTTT
ATTCTCAAGGCTGTGAAGCCAATGTAGATACCTTGGAGTGTACCTAATAC
AAAGACTGTAAGAAGGAATAAGATCATCTCGAACTTTTTTAGCGTTTGGA
AAACGATTTCTTTTAAGGGCGTTTCGTCGACATCGACTTCgggcactttt
tctattgtattGCTCTTGGATTCTTTAAAGGTTTTCAACTCGGAAGGTTC
GGCAGCTTCATTTTTCACAGTCGATTCTCTGAACAAGAAAGGACTCGCTA
TCGCTAAACCAATCAAGTACAAACTCAAAACCACAAACGCTCCAGCAAAA
CAGTTCACTTTATCTGTATACGGAAATACATCGGACAGCGATCCGGATAG
AATGGAACCAGCGGAAAATCCGatggctccaaacattcgattccATCCAA
AATTCTTCTTCTTTGATGATTTGAGGATTCTTTTCACAACACCAGCATCC
ATCATGCTGACTAAACAACCGTCAAAGGCGGAAGCAAAGATATTGATAAA
CAGAAGAACAAGGAATCGCGTAGAACGAAAATCGATACTTGAATCGGATT
GGTTGGTAGGAGATATTCCATTACTTGTTACGTTCACTTTCGTTTCAATA
ACAACTGGTGCAGGGCAAGTGTTTGTCGATTTATCTCCGATCACTAAAGA
CAACAAAGGTTGACCACCGACCAAAACTAATGACATAATCGTCATAATAA
TGACAATGAACACATGATTCTGTTGTTTGTCGGTTATGAAGCCCCATAAA
GGACCAGCAAAAGTCATCCCAAGTAGACGAAGACCTGTCACAAGACCAGC
TTCTGCTTTGTTCAATCCGACGCCAACGAGGAATGGTACCATGTATGGTT
TGAAAGCGCCGTCTATTCCAACCGTCAGGAAGAAGCATATTTTGGCCGGT
AACATGTACACATCCACTTTGAAAAGTTCTTTCAGTCGTTTGCCCGCCAt
ctcgtttttttttgtttttatgaatTGCAGCTGTAAAAGAAAAGGTTAAA
AATTATAAGTATCCAATTTACATTTCGaagtaggcttctgctcatcatCT
AGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051365-exon-scaffold_201-1491911889:11283..14035 | TCONS_00051365-exon-scaffold_201-1491911889:11283..14035 | Clytia hemisphaerica | exon |
| TCONS_00051365-exon-scaffold_201-1510915933:11283..14035 | TCONS_00051365-exon-scaffold_201-1510915933:11283..14035 | Clytia hemisphaerica | exon |
| TCONS_00051365-exon-scaffold_201-1575043694:11283..14035 | TCONS_00051365-exon-scaffold_201-1575043694:11283..14035 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:11283..14035 + |
Blast
The following BLAST results are available for this feature:
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