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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051335 ID=TCONS_00051335|Name=TCONS_00051335|organism=Clytia hemisphaerica|type=transcript|length=606bp
AGAGTGGAAACTAAATCCTGAAATCTTTGGATTTCTAACTGCTACTTtaa
atttcaaaccaaaaatAGACTATTTTGCTAGTAGGCTTAACACTCAGCTA
CCCAAATATGTCTCCTACAGGCCTGACCCATATGCTCACTTAATAAATGC
TTTAGCCCAAAACTGGTCCAACACTAAAGGCTACATTTTCCCTCCTTTTA
GCTTAATCGACCGTGTACTTCACAAGATTCGACACGAAAAAGCAACAGCA
ATGGTATACAACTTACATGGAAATGCTGAGATCGAAGCTGGTAACGATTC
CACCCTGTCCAACCGTAATGACAATGCCACAAGCTCCAAATCTGGTACAC
CCTCTTCACAAAAATCTTACCCTAATGGCGGGGATCTTATCCGGCAAAGA
TATCAAAATGTGGGAATAAATGAAAGCTCAATCAACATTCTTCTTACAAG
TTGGAGAAAAGATCGGCAGCTACATCTAAAGCATCCAAAAAGTGGATACC
TCTAAAAACGATTATCAACATAGCTGGTTGGAAAAATGAACGTATGTTTG
CAACCACTTATCAAAGGACAATTGAATGCGACTTTGACATTGTCACTTGA
AAAAAT Run BLAST on NCBI transcript from alignment at scaffold_200:197339..198680- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051335 ID=TCONS_00051335|Name=TCONS_00051335|organism=Clytia hemisphaerica|type=transcript|length=1342bp|location=Sequence derived from alignment at scaffold_200:197339..198680- (Clytia hemisphaerica)
AGAGTGGAAACTAAATCCTGAAATCTTTGGATTTCTAACTGCTACTTTAA
ATTTCAAACCAAAAATAGACTATTTTGCTAGTAGGCTTAACACTCAGCTA
CCCAAATATGTCTCCTACAGGCCTGACCCATATGCTCACTTAATAAATGC
TTTAGCCCAAAACTGGTCCAACACTAAAGGCTACATTTTCCCTCCTTTTA
GCTTAATCGACCGTGTACTTCACAAGATTCGACACGAAAAAGCAACAGCA
ATGGTATACAACTTACATGGAAATGCTGAGATCGAAGCTGGTAACGATTC
CACCCTGTCCAACCGTAATGACAATGCCACAAGCTCCAAATCTGGTACAC
CCTCTTCACAAAAATCTTACCCTAATGGCGGGGATCTTATCCGGCAAAGA
TATCAAAATGTGGGAATAAATGAAAGCTCAATCAACATTCTTCTTACAAG
TTGGAGAAAAGGTACAAAATCTTCCAATGCTAAGTACCTCACAGCTTGGA
AAGATTTCTCTTTGTCAAGAGGTATTGATTCTTTTGACCCAACAATACCA
CAAGCCTTAGCTTTCCTAACAAATTTATTTGAGAAAAATCAAAGCTATGG
TTGACTCAATACAGCTTGCAGTGCTCTTTCAGCTGTATTTGCTCCAAAAC
AAGGGACAACTTTCGGAAAACTTCCCATTATAAAAAGATTCATGAAAGGT
GTATTTGAAACTAAGCCATCTTTCCCCAAATATACAGTCGTTTGGGATGT
AAACAAAGTCTTTGATTTCTTCAGATCCCTTGAGATCACTGCCAACTTGC
CACTGAAAATGCTAACTCTAAAACTATGTATGCTTTTAATGTTGATATCA
GGGGGTCATAGGTCACAAACCATACATTGCATTGCAAGAGCTGATGTCAA
ATTTGACGAAACATCAGTTTACATTCCTATTATGGAAAAACTGAAGCAAA
CAAAAGCCACAAACCATGTGGAACCCTTAGAATTCAAAATGTTTTCTGAA
CATAAGTTGTGTGCAGTGATACACTTAAAAGAATACATTAATAGAGTTGA
AACCTTAGCACCAAATGCAAAACAGCTGTTCGTTAGCTTTGCAAAACCGC
ATAAACCTGTATCTAAAGACACAATTTCACGCTGGTGTAAAGAGGTGCTA
AGGTTGTCCGGTATTGATATTTCTAAATATACGACCCATTCTTCTAGATC
GGCAGCTACATCTAAAGCATCCAAAAAGTGGATACCTCTAAAAACGATTA
TCAACATAGCTGGTTGGAAAAATGAACGTATGTTTGCAACCACTTATCAA
AGGACAATTGAATGCGACTTTGACATTGTCACTTGAAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051335-exon-scaffold_200-1575043694:198220..198680 | TCONS_00051335-exon-scaffold_200-1575043694:198220..198680 | Clytia hemisphaerica | exon |
| TCONS_00051335-exon-scaffold_200-1575043694:197339..197483 | TCONS_00051335-exon-scaffold_200-1575043694:197339..197483 | Clytia hemisphaerica | exon |
| TCONS_00051335-exon-scaffold_200-1510915933:198220..198680 | TCONS_00051335-exon-scaffold_200-1510915933:198220..198680 | Clytia hemisphaerica | exon |
| TCONS_00051335-exon-scaffold_200-1510915933:197339..197483 | TCONS_00051335-exon-scaffold_200-1510915933:197339..197483 | Clytia hemisphaerica | exon |
| TCONS_00051335-exon-scaffold_200-1491911889:198220..198680 | TCONS_00051335-exon-scaffold_200-1491911889:198220..198680 | Clytia hemisphaerica | exon |
| TCONS_00051335-exon-scaffold_200-1491911889:197339..197483 | TCONS_00051335-exon-scaffold_200-1491911889:197339..197483 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_200 | supercontig | scaffold_200:197339..198680 - |
Blast
The following BLAST results are available for this feature:
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