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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051257 ID=TCONS_00051257|Name=TCONS_00051257|organism=Clytia hemisphaerica|type=transcript|length=779bp
CTTTTCAATTTGGTAAGTGAACAACGCATTTCCTGAAAAATCAAATCCAC
ACATTTCACCTGAGTCTCGTCTATATCCCCATTGGAGCAAGTATACTCGT
TCATATTCAAAATCATAGAAGAGTTCAATACAATCCAAAGAATTAAAgta
tttctcaaaatataatttcaaatttttgaaatggaCCAATTTTTCTTCGT
CAAATTTGTATAACTCAATGAGgcattcctttttttttgctctaagcCCT
GCTCTAAGAGAATCTCTAAAAAACGTTCATCACCAACGACTCGAATCTGG
TAGTACATACACCTAGCATCCTCATACAGCTTTTGAATGCAATCAGATTT
ATATTTCGCTTTTAAAGGTAGAGTCAGTGATGTTCCAAAATACTCTTTAA
GACAGCCACTTTCGATATTAAGGGTTATCCCCTCTGCAACAAAATCCGTG
GAAAGGTAAAATGTGCGCGCTGTGAAAGGGTCGTATATAATCTTTACGTA
TGAGTCAGAATCCGTAATTTCAAGATTTATCATGTTGGCACGAAAATCAC
TGTCAAAATGGTACACTAATATCTTATTAGGTGAGCCTCGTAGATGAATA
GTGTAATATTTTCCACTGCGATCGAAACCGTTAGTCGAATCATTTCCTAT
ATGAATGGAATCTTTCTCGTCCTTGGACCATAATACATCTGTTTCTTGGC
AGCTTTCGATTAACGTTGGAAGGAAATTTTGTCGGtacatttttcttgaa
ttttttttcagcttcttaaaatatttcat Run BLAST on NCBI protein sequence of TCONS_00051257-protein >TCONS_00051257-protein ID=TCONS_00051257-protein|Name=TCONS_00051257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MKYFKKLKKNSRKMYRQNFLPTLIESCQETDVLWSKDEKDSIHIGNDSTN
GFDRSGKYYTIHLRGSPNKILVYHFDSDFRANMINLEITDSDSYVKIIYD
PFTARTFYLSTDFVAEGITLNIESGCLKEYFGTSLTLPLKAKYKSDCIQK
LYEDARCMYYQIRVVGDERFLEILLEQGLEQKKRNASLSYTNLTKKNWSI
SKI Run BLAST on NCBI transcript from alignment at scaffold_20:31685..32463 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051257 ID=TCONS_00051257|Name=TCONS_00051257|organism=Clytia hemisphaerica|type=transcript|length=779bp|location=Sequence derived from alignment at scaffold_20:31685..32463 (Clytia hemisphaerica)
atgaaatattttaagaagctgaaaaaaaattcaagaaaaatgtaCCGACA
AAATTTCCTTCCAACGTTAATCGAAAGCTGCCAAGAAACAGATGTATTAT
GGTCCAAGGACGAGAAAGATTCCATTCATATAGGAAATGATTCGACTAAC
GGTTTCGATCGCAGTGGAAAATATTACACTATTCATCTACGAGGCTCACC
TAATAAGATATTAGTGTACCATTTTGACAGTGATTTTCGTGCCAACATGA
TAAATCTTGAAATTACGGATTCTGACTCATACGTAAAGATTATATACGAC
CCTTTCACAGCGCGCACATTTTACCTTTCCACGGATTTTGTTGCAGAGGG
GATAACCCTTAATATCGAAAGTGGCTGTCTTAAAGAGTATTTTGGAACAT
CACTGACTCTACCTTTAAAAGCGAAATATAAATCTGATTGCATTCAAAAG
CTGTATGAGGATGCTAGGTGTATGTACTACCAGATTCGAGTCGTTGGTGA
TGAACGTTTTTTAGAGATTCTCTTAGAGCAGGgcttagagcaaaaaaaaa
ggaatgcCTCATTGAGTTATACAAATTTGACGAAGAAAAATTGGtccatt
tcaaaaatttgaaattatattttgagaaatacTTTAATTCTTTGGATTGT
ATTGAACTCTTCTATGATTTTGAATATGAACGAGTATACTTGCTCCAATG
GGGATATAGACGAGACTCAGGTGAAATGTGTGGATTTGATTTTTCAGGAA
ATGCGTTGTTCACTTACCAAATTGAAAAG Coding sequence (CDS) from alignment at scaffold_20:31685..32463 >TCONS_00051257 ID=TCONS_00051257|Name=TCONS_00051257|organism=Clytia hemisphaerica|type=CDS|length=612bp|location=Sequence derived from alignment at scaffold_20:31685..32463 (Clytia hemisphaerica)
atgaaatattttaagaagctgaaaaaaaattcaagaaaaatgtaCCGACA
AAATTTCCTTCCAACGTTAATCGAAAGCTGCCAAGAAACAGATGTATTAT
GGTCCAAGGACGAGAAAGATTCCATTCATATAGGAAATGATTCGACTAAC
GGTTTCGATCGCAGTGGAAAATATTACACTATTCATCTACGAGGCTCACC
TAATAAGATATTAGTGTACCATTTTGACAGTGATTTTCGTGCCAACATGA
TAAATCTTGAAATTACGGATTCTGACTCATACGTAAAGATTATATACGAC
CCTTTCACAGCGCGCACATTTTACCTTTCCACGGATTTTGTTGCAGAGGG
GATAACCCTTAATATCGAAAGTGGCTGTCTTAAAGAGTATTTTGGAACAT
CACTGACTCTACCTTTAAAAGCGAAATATAAATCTGATTGCATTCAAAAG
CTGTATGAGGATGCTAGGTGTATGTACTACCAGATTCGAGTCGTTGGTGA
TGAACGTTTTTTAGAGATTCTCTTAGAGCAGGgcttagagcaaaaaaaaa
ggaatgcCTCATTGAGTTATACAAATTTGACGAAGAAAAATTGGtccatt
tcaaaaatttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051257-exon-scaffold_20-1491911889:31685..32463 | TCONS_00051257-exon-scaffold_20-1491911889:31685..32463 | Clytia hemisphaerica | exon |
| TCONS_00051257-exon-scaffold_20-1510915933:31685..32463 | TCONS_00051257-exon-scaffold_20-1510915933:31685..32463 | Clytia hemisphaerica | exon |
| TCONS_00051257-exon-scaffold_20-1575043694:31685..32463 | TCONS_00051257-exon-scaffold_20-1575043694:31685..32463 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:31685..32463 . |
Blast
The following BLAST results are available for this feature:
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