TCONS_00051243 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00051243
Unique Name	TCONS_00051243
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1871

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_20:204928..214201-

transcript sequence

>TCONS_00051243 ID=TCONS_00051243|Name=TCONS_00051243|organism=Clytia hemisphaerica|type=transcript|length=1871bp
GATAAGTAgttctttttgagaaaatgtccaATTTTGTGATGGTAATTCGT
TTTGAACAAAACTTTcttcaagaaaaaataaaaataatcaagaTGTCATT
TTTTGGTGGCTATAACAATTACAATGGTAGAGGTGGGGGATTTCCTCGGC
CTCGTCACCAAAATGCAAGGTTTGGAATTGCACCCTTGATGAGACCAAAT
AATCAACAACGACCAAGAATGGGGATGAGTCCAAGAGGTGGCCGACCACC
ATTCAGAGGAGGAAATCATGGTCCAAACCAGCATCGATTTAGATCACCAG
GTAGAGACGATTCATTCAGAATGAGGGGGCCAAGACCACCGCACAATATG
AGTTACAATCGAACAATCAAACCTGATCAACAACCACCTGGTAATACAGA
AGACTTTACCAAAGATGTTGACATGACTGAAATAATCGAAACCAAACCTG
CAGTTGATACCATTACACCAAATATATCTAAATCTGAAGTAACAGAGTCT
AAGCAACCCAAATCGGCTGAAGAACCTAAGaaagaagAAGTATCAAAAGT
CGAAGTGAAAGAGGAAATCAAACAGGAGGATATCAAACCAACACCAAAAA
TGGAATTGGATCGTTACAACAGTGAGCTACACGTCAAGTTATCTCAAGAC
AATCTGGTGGGCGAGATATTGAAAGGGGACGGTTTCCAGTACATGTGGGG
AGGTGTCCGCGGTACCCATGGAGTTAAACGAGGAATGGTCTGTTACGAGG
TTCATATTCTCGAGTACAACAAAGTGGACCTACCCAATGAGAAAAACCCA
TGTGTCGCTCGTGTTGGATGGTCTGTTGACGGCTCCGACTTTCAACTAGG
TGAAGACAAACTCTCTTGGGGATACGGTGGCACGGGAAAATCATCAGTTG
ATTCGAAATTCCGTGATTACGGCAAACCGTTCGGTGCAGGAGACGTTATA
ACGTGTTACGTCGACCTTAACAAAGTTCCCAAAGCAATCTTCTTTGCTTT
AAACGGGGAATATCTTGGCGTGGCGTTCCGTTTCACTAACGAACTTGGTG
ATAAGGCATTATACCCACACATCACTGTCAAGAATGTCACATTCAGGGTC
AACTTTGGTAAAGAGCCACCCAAGTATCCCTTAACAAATGGCTTCAAGAT
GATTGGCACCTTACCGGAGCCTGACGTCGTCTCCCCGCCACCCGGCCCGA
AGTTAGAGAAAGAAGCCGAAGTTATTGTCATGGTTGGTCTTCCAGGATCT
GGTAAATCGTACTGGTGCGAGAATTACAAGCGAGAACATCCTGACAAGAA
ATATTACATCCTTGGTACCAATTTAATTATCGACCGTATGAAAGTTTCTG
GTTTAACACGTAAACGTAACTACCACGGTCGCTGGGAAGAGTTGATCAAA
CGTGCCTCTGGTGTATTGAACAAGTTGTTCACAGTCACCAAAGCAAACCC
GCGAAACTATATTCTCGATCAAACCAACGTGTACTTCACTGCTCGTCGTC
GCAAGATGGAAGCCTTCCGTAACTACAAACGTAAGGCCGTCGTCGTGGTC
AATAAGCCGCCTGTGTTAGCACAACGTATCGAGAAACAACGTCAACTGGA
GGGGAAAGTCGTGCCCGATCAAGCTATTATGGAGATGAAGAAAAATTTCA
CTCTTCCTGAATGCGGTCCGTCATTCGATGAAATCCTGTACGTTGACGAA
CAACTACCAACTGCCCGTGAAATCGTCCAACAGATCCGTAAAGAgggtga
aaatttcaagaagGAGCAAACCACTCCTGGTAAATCGCCGATGCCCGCTG
GATCCAAGAGATCGTCACCACCACGCCATCCCGAACAAGAGAAACGCCCA
AAGCTCGAGCCTCCTTCCGAC

Run BLAST on NCBI

transcript from alignment at scaffold_20:204928..214201-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00051243 ID=TCONS_00051243|Name=TCONS_00051243|organism=Clytia hemisphaerica|type=transcript|length=9274bp|location=Sequence derived from alignment at scaffold_20:204928..214201- (Clytia hemisphaerica)
GATAAGTAGTTCTTTTTGAGAAAATGTCCAATTTTGTGATGGTAATTCGT
TTTGAACAAAACTTTCTTCAAGAAAAAATAAAAATAATCAAGATGTCATT
TTTTGGTGGCTATAACAATTACAATGGTAGAGGTGGGGGATTTCCTCGGC
CTCGTCACCAAAATGCAAGGTTTGGAATTGCACCCTTGATGAGACCAAAT
AATCAACAACGACCAAGAATGGGGATGAGTCCAAGAGGTGGCCGACCACC
ATTCAGAGGAGGTATAGAAACGTTTTCTATAATATATAGATAAAAGAATA
CAGAACTAGCTTACAATTGCTACTCCAAATCTTCTAGCAGTCAGATTCAG
AGTTTTACCATGTACTTTTTAAATTTTTTTGAGGACTCCTTTTCTCAAAT
TGCATTTGCAATAACCTTTTTGGAGTACTTTGTGCAGGGATTTTTCTAAG
TACTTTTTTATGTTCGTACACCAGCCAAAATACTCATTGATGCAAGATTG
CAATTTTTGAAACTGAAGAAAATATATTTTCTAGCAAAATTTAATTTCTT
TTGTTGCATATAAGCAAAATAACTAATATTATCTACGTATTCTAAATTTT
TTGGGACCTTCAGCCCCTGCATCCCATGCTTTACTTATTAATTTCACTAC
ATTCATTTTCATCTTTTACCAGGAAATCATGGTCCAAACCAGCATCGATT
TAGATCACCAGGTAGAGACGATTCATTCAGAATGAGGGGGCCAAGACCAC
CGCACAATATGAGTTACAATCGAACAATCAAACCTGATCAACAACCACCT
GGTAATACAGAAGACTTTACCAAAGATGTTGACATGACTGAAATAATCGA
AACCAAACCTGCAGTTGATACCATTACACCAAATATATCTAAATCTGAAG
TAACAGAGTCTAAGCAACCCAAATCGGCTGAAGAACCTAAGGTATAATCG
CCGGTGTCTGATCTGTCTTATATAGATAGAAACTAAANCAATCGGCAGAA
GAACCGAAGGTATAATTGCCGGTGTCTGATCTGTCTTTTATAGATAGAAA
CTAAAATCCTAAAAAATAAGAATTGGGTAAAAAATCTTAAATTGTTGTGC
TAAATTTAGATTAGATAAGCCTATCCTTAAAATTCTAATTATATGGTTGA
TTACATTTAGCTTAGATTTGTAAAGGACGAGCGGGCGATAAATCCGTAAT
AGCCCCGCTTTTTTGTAATCGCCCTGATGTAAACAAAAATTTCTATTGGT
TGAAAGAAAAGTATCGTACGGTATTTTAATTGGTTAACAAAATATTGTAC
AAAATTTTTAAGCCAATCAAAATAATAAGAGTGTCAGTCGAATGTTTTTT
TATAGTTTCGAATGTTTTTATAAGTTTCGAAAAGAATAGCGATTGAGTGT
TCTTCAATTCTTTTTTTGACCATATAATTAACGCGGAATAACATGGTATT
CTTGGGTGATTTGGGATTAATAACCCCGAGGAAACGATGTTATATGTTAT
CTAAACCATGTTATTCCGCGTTAATTATATGGTCAAAAAAAGAATTGAAG
AACACTCAATCGCTATTCTTTTCGAAACTTATAAAAACATTCGAAACTAT
AATTTTCCATAATGAATAATTTTGAAGAAACAAAGAAAAAGAACTTTGAA
ATCGTTTTTTCGATCTGTTACAGTACTTGCTTTAAAGTGTTTAGAAGCCA
ATGTAAATAATAAGTTATATTTAAATAATTAAATAATAAATAAATAATAT
TTTCTTTTCAAATAATAATGGCTCTCTGGTAATCCAAATGGCTTTGAGAC
CAATTTGGAATGTGATCTAAAAACTTTTTTCTCAATATTTTTTTTATAGA
AAGAAGAAGTATCAAAAGTCGAAGTGAAAGAGGAAATCAAACAGGAGGAT
ATCAAACCAACACCAAAAATGGAATTGGATCGTTACAACAGTGAGCTACA
CGTCAAGTTATCTCAAGACAATCTGGTGGGCGAGATATTGAAAGGGGACG
GTTTCCAGTACATGTGGGGAGGTGTCCGCGGTACCCATGGAGTTAAACGA
GGAATGGTAAGACCATATCTTTATTTGTATAGGGGAAGTTTATGATTGCA
TTGTACATTGCAATTACTTTATCTTTAGCTTCTTTAATTTGCAATTGGTT
TCCTTCATCAGAATGGGATGAAAGAATGTTCAGTTTTGACGTTTTCTTCT
GATTCTTAAAACTATTCAACTATCGTAAACGTGGTTTTACAATTGATGGA
ATACATTCATTTGTATGTTGTTGATGGATATAAAAAATACAGGCATAGTG
TATGCGATAAGATGTTAGTTCTAAGTGATTTTGTCAAACATCATAGACTT
AACTACTCTTGACATGCAGATGATAGATTGATTTGAAATATTTGGCCCAT
GTGAAACATTAGCATACAGCTTTGAACTGACATTCAAAGGAACATAATTT
TAGATATAAGAAATGATTGTGATGGCTGCCATGAAATACGCGACTAAATC
TCGAAAATAATAGTAGTTTCTAAGCTACATTAGTACATTGGAATTTCTAG
TTCCAATCGTTCCCTCGAGCCAATTCAACAAAATAGTCAGAATCATTAGA
ATTGATACCTTTGGATAATATTCCCGATATTATTTTTTGATTGGTTGAAA
TTTGTCGACTAAGATGAGAGAACAGCCTCAAGGAATTGAAAACATGTCAC
TGGTATCAATCAATAAGATCCCCAAATCGAAAATATCCGCACCCTTCAGT
TTACTGAAATATACAACAAAGATGCCTCATTAACCGAAGTCCCAAAATAT
CACCTTGACTAAAATTTGACCTATAAAATATTAGCCAAGAAAAAAAATTT
ATACCCCATCGCTAAAATTTGTTTGAAAATGACTTTTCAACCAAATTCCT
AGAACACCTTGACTAAAATTTAACTTAAAAATACGAGCCAAGCAAAAATA
TTTTGATATCCCTGCCCTACTGGTTGCTAGTAAAACTAGCTTCAAAAATG
CCCTAATAACCAATTTCCCAAAATATCACTGAGACTGAAATATAAATATA
AAATACAAGCAAAGCAAAATTATTTTTATACCCATACTCCACTACTTGTT
GCCCTAATATAACCAATTTCCAAAAATATTACTGAGACTGAAATTTGATC
TATTCTTTCAACTAGATTCCCTAAGACATTACTAAGCATTGGAGAATGTT
AATTGTTGACCCCAAGAGAGTAAATTTTTGCGAAAAAGTTAACCTTAGAA
AGACAAAATGGGCGAAAAAGTGACCCTTAGAAGGACAATTCTAGAAAAAT
TTACTTTTTAGAGATCTTTTTGACCCTTAAAACGACCCAAAAAGGGGAAA
ATTCAGATCCTTAGCAGAAACTATTTTGACTTTCATTGCTTTTGTAATCC
TTCAAGGTTTTATCTAGTTTTACATAGACGTGTTCCTGTTTCATATCATA
CACAATGTTTTAAATCAGACCGGTGTCTCCTAAATATTGTTATATTGTAC
TCAATAAACAAAGAATTTTTCTCTTTCTGACCAATCTTGCTCCACATCCG
TTACAGTTCAATGGAAAAAAGCTTGTAAGTTAAAATTCATGAGTAAGCAA
ACAATATCAACATATTTCAAGACAAAACCTTTAAGGAGAGCCTTGGAAAG
GTCAAAAGACCGGACCTTACCGTCGGCACACACCGAACAACTATTTTTGC
CTAAGAATCCCTTCAGTTTAACTCCTTATGCCTCAAATTGTTAAAATCTT
CATTAAAGGTTTTGTTTTTTTAATAAGAGTGATATCGTTTGCTTACTCAT
CAATTTTAGTTTACAAGCTTTTTCATATTGGATTGACACGGATGTGGAGT
AGGATTGGTCAGAAAGAGGAAAAGAAATTTCTTTTTTGCTTATATCAGCA
TAATATAACAATAGGCAGACACTGTCCTATATGAAATATGTACCTGATAT
GTAACAGGAAAACTTATGTAAAATAAAAAACTTTAATTATTATTCAAATG
GTTGATAGAAAACTCATTTTTTCAAAAATTCAATAACAAAGGACAATCAA
TCAAATGCAACCCTGCCCCACCTCTGTTATGCGAATGGAAATACCGCTTT
AAAAGGTGGTAAAAATACCAAAGAGCTCAAATTCAAGGAGTCGGACGACC
CAAAGCCAAGACCTAAATCTGATAATATTACCAGTTGTTTCAAAAAGAAG
TTTAATTATTAAGTTTGAATTGACATGTAATCAATCTAATGTTGACATCC
CTGGAAAGAGGAAAAGCTTAAATTTTGAACTATCTCATATTCGAATTCGT
TCAAAAATATTTCATACATTCGAAAGTCACTGGTATATTTTATTACTAAA
ATATAGAGCTTTATTACTCTAGGTGATGATAAGTTCGAAATTTAATACAA
TTCTTTTTAAAAATGGTAACTTTTTATAACTTTTGAACGGTTGAACTAAA
TTTGATTTAAGATAGCTTAAAATTCAAGTTAAACTTTGCTGTTTCCAATG
CTGGAATGAGTAGATGGATATAGCCCCCCCCCCCCCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGCCCCCCCCCCCCAATTCATCTTTGATGAATATCCTCAGGAGCCCCCC
AACCCCTTTTGCTTCAGCCACCCTCTTCAAAGAAAATGAATTTTAAAAAA
CGGTCAAGCTCTTTCCAAAAAGTTTTCTGAACATTCCTAACACTATGATT
AGTAAATTGGCTTTCTGTGATCCAGCCCCATTGTTTTCCGAAGAATAGAA
CGACCATTTTTTCGTTCTTCATGTTCAGTACCTAATAAAATAGCACCCAT
TACACTTTGGCCAATCACCCTAAAATTGAAAAACCAAGATTAATATATAA
TAACTCCATCCCTTGTTGCTCCCCAACCCCTCCTTTTAGAAAACGAAACA
ACCCTCTTTTTCTAAATTCCAATTGTACGTCAATTTCGCTGTTTTGCCAT
TCTGGAAGATTATATCGTATGTTCTCATGCGATAAAAAGCCAAGAACTTG
ATACGACAATTATTATGGTAACAAAAAGCCGTCGAGGCTAATGCTGGATA
CATCTAATTATTATTGGCAGACCTTCCACTCGATACTGAATTACTGCAAC
AAATTACGGACAATCAATAATAATTACTTTTGTGAAATTCCACACTGTAG
AAAACTGTGGCCTTATTATTTAAAGGGAATTTGAAAACAGATTTCAAGCC
AATCAGTTTCTTATACAAATAGCAGTAAAATTTGACATGTTTGTGGACTT
TTGATAAATCTTTGAGCGATTTTGTAGTCGTGGAAAAGATAATGTACTTT
AATTGGATGAGTTTTCGTGGGGATTAAATTTCGCGGATTTCGCGGATTTC
GCGGATTTGGGTGTCATCCGCGAAATTAAGTCCTAATGAAAATTTAGAAG
GCCTTATCTGCCAAATATTTTTGAGAAAAACTCAGAAAAATTCAAAAAAC
CTCTTTTAAAATGTTTACTGGAATTAAAGAAGCGTTAAGAATGCGTATTT
TGACAAGCAATATGCATGATTTGGCGTAAAAAGGCACAATAATATTATCC
ACGAAATTAAAGTCTGTCTCAAAAGTTTGTGGATACTTTAGTTTTTTGAC
ATTTTCTCAGCACCCACTCATGCTATGTTAGAAAGTTATACATCGTTGAA
AAGATATTTCCAAGGAGAGGAATCGAAAGGATAAAAGATTTTTAAGAAGT
TGAAAAATGAAGATGAAAAAAATGAAGATATTTTCTACTGTTTTAGAAAT
TATGACATGAAATTTTTTAGTTGAAGCTTGCTGATTTCAAATCTGTGCTC
AGATTTTGCATATCTTTTTTGGAGAAAAAGTTAGAGCCCTTTGAAGAAGG
TCTAAAACAGCCAAAAATGACCAAAAACAGCAAAAATGACCAAAAACAGC
AAAAATGACCAACTTCACAACTTTTTTTTCTAAGAAAGGTACAAAAAAAA
TCCGAACAGAGATTTGAAATCAGCAAGTTTTTTCCAACGGTGTATAACAT
TTTAATGGATGCTGAGAAAATGCTCAAAAAAACTTAAGTATCCACGTATT
TTTGAGACAGACTTCCATTTTGTTTTCACGGCGAGGTTCATTCAGTTGTA
AGCAAATGACTACTCAGAACTACTTCAAAATCTTTAGGCTTACTTTCTTC
ACAGTGACGATTAGCCAAGATTGAAGATTCATTTATAGTGGGATAATTTT
CTAAGGAATTGATTTTTCGATCCATTTTCGTTTTTCATCCATGAAATGTT
TCATTATGAGATAGTCCACTCGCGATGTTCTTTTTCAGTAAGCGTAAAAA
TAACTCTTCTTTACACCGTCTATAAAATGAAATATGGGCTTGAATGAAGA
CCCAAAGAATGTCCAAAATCAATTTTTCAACATACAAAGTAGGCGCAAAA
TGAGATCTCGCCCCTGTAGACCGATTATGCGAAATTCAGTAGTTAAAGGA
TCTTAGACCAGACAATCATGGAAAATGCCTGTTCCGAATCGACATGAAAT
TCACATTTTCCCAATTCTCAAAATTGTATACAGGTCTAAACGAGAAATAT
TCGCAACTGAGCTAAATGAGCTGTTATCAATCCGCCCTTACAATGTATAC
GTTTTTCTGTCACTTAGGAAATTAATAATTAGGCTCAAAAATGACTTCAA
GTGGGATCGGGCTTCGAGAAGGCTTGCNGGCGTTCCGTTTCACTAACGAA
CTTGGTGATAAGGCATTATACCCACACATCACTGTCAAGAATGTCACATT
CAGGGTCAACTTTGGTAAAGAGCCACCCAAGTATCCCTTAACAAATGGCT
TCAAGATGATTGGCACCTTACCGGAGCCTGACGTCGTCTCCCCGCCACCC
GGCCCGANCCTACAGAATGTCATTACATTACACATTATAGCATTTGAATA
TCAAATTCTTTTCTTATTCCCTTAAAAGATACTTCGGTCACGGTTTTCTG
CACTTAGATACTCACTATGCTAGACGATCTTCAACTATAATGAAAATTGG
CGTATAACTTTTATCGTTTGTTGGAGATTTTATACAAACCACGGTGGATT
ACGAACAAATTAGCTACATTTAGTTCGAAACATGTCTGGAAAATCATATG
ATAATACTAGCTGTAGTTATCATGTCACCAAAAGGAACATGTATCATTAA
TCTACTACTACTACTTAGAAAAGTTGATAATACATATTGGATGATTAAAA
GGATATTAAGGCCGTCTACGGCTCACGTTTGAAATCTTTGGTATCTAATG
GTATATTTGTCTCAATCCTCCGTCCAATATAGAATAGTTGATAATGTGTA
TGAAAAATGACTTCAAGGACAACAAAGCTAGCCATAGCTCACGGAATGTC
TTTTAATTTCATGTTTTACTCAGATTATCACGATACATCCTGACTATATC
TTCCAAACACCACAACTTGCCATAGCCTTCATAATTATAACCACTTAGAG
GGATTTGCTTGGCAAGAAGCAAATACCAGTTTGTCATCCATCCTTAGTGT
AGATGAATTTAGATTTGTTAAATTTCTTAAATTTCTAGGCTTCGGATTGC
TTTTCTATCCTAGGTGGTCCTTGGAAAAATGCATCTCTAATTACTTGATA
GTAATCTCACGTGATTCTTCAGAAAGATGTTGTATTTAATTTATTGCAAG
TTTGCTTACCACTCGCTCACTCAAACTTGAACTCATTTCTACACCGTCTT
ATAAAATATGTGTATGATTTAATACATATTCAATACATATAGGTTTGAAC
CACAAGATTGACCCAGTACAGTAAGTCGTAGAATACAATTTTGAATATAT
CATTTGTACAATACATGTCTTATTCAGTGATCAATAGGTCTATAATAATG
CCTCTCCTTTCACGAGATTTCATCTTGATTAACATCTTAGGTCTGTTACG
AGGTTCATATTCTCGAGTACAACAAAGTGGACCTACCCAATGAGAAAAAC
CCATGTGTCGCTCGTGTTGGATGGTCTGTTGACGGCTCCGACTTTCAACT
AGGTGAAGACAAACTCTCTTGGGGATACGGTGGCACGGGAAAATCATCAG
TTGATTCGAAATTCCGTGATTACGGCAAACCGTTCGGTGCAGGAGACGTT
ATAACGTGTTACGTCGACCTTAACAAAGTTCCCAAAGCAATCTTCTTTGC
TTTAAACGGGGAATATCTTGGCGTGGCGTTCCGTTTCACTAACGAACTTG
GTGATAAGGCATTATACCCACACATCACTGTCAAGAATGTCACATTCAGG
GTCAACTTTGGTAAAGAGCCACCCAAGTATCCCTTAACAAATGGCTTCAA
GATGATTGGCACCTTACCGGAGCCTGACGTCGTCTCCCCGCCACCCGGCC
CGAAGTTAGAGAAAGAAGCCGAAGTTATTGTCATGGTTGGTCTTCCAGGA
TCTGGTAAATCGTACTGGTGCGAGAATTACAAGCGAGAACATCCTGACAA
GAAATATTACATCCTTGGTACCAATTTAATTATCGACCGTATGAAAGTTT
CTGGTTTAACACGTAAACGTAACTACCACGGTCGCTGGGAAGAGTTGATC
AAACGTGCCTCTGGTGTATTGAACAAGTTGTTCACAGTCACCAAAGCAAA
CCCGCGAAACTATATTCTCGATCAAACCAACGTGTACTTCACTGCTCGTC
GTCGCAAGATGGAAGCCTTCCGTAACTACAAACGTAAGGCCGTCGTCGTG
GTCAATAAGCCGCCTGTGTTAGCACAACGTATCGAGAAACAACGTCAACT
GGAGGGGAAAGTCGTGCCCGATCAAGCTATTATGGAGATGAAGAAAAATT
TCACTCTTCCTGAATGCGGTCCGTCATTCGATGAAATCCTGTACGTTGAC
GAACAACTACCAACTGCCCGTGAAATCGTCCAACAGATCCGTAAAGAGGG
TGAAAATTTCAAGAAGGAGCAAACCACTCCTGGTAAATCGCCGATGCCCG
CTGGATCCAAGAGATCGTCACCACCACGCCATCCCGAACAAGAGAAACGC
CCAAAGCTCGAGCCTCCTTCCGAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_032479	XLOC_032479	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00051243-exon-scaffold_20-1575043694:213941..214201	TCONS_00051243-exon-scaffold_20-1575043694:213941..214201	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1575043694:213261..213529	TCONS_00051243-exon-scaffold_20-1575043694:213261..213529	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1575043694:212146..212352	TCONS_00051243-exon-scaffold_20-1575043694:212146..212352	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1575043694:204928..206061	TCONS_00051243-exon-scaffold_20-1575043694:204928..206061	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1510915933:213941..214201	TCONS_00051243-exon-scaffold_20-1510915933:213941..214201	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1510915933:213261..213529	TCONS_00051243-exon-scaffold_20-1510915933:213261..213529	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1510915933:212146..212352	TCONS_00051243-exon-scaffold_20-1510915933:212146..212352	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1510915933:204928..206061	TCONS_00051243-exon-scaffold_20-1510915933:204928..206061	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1491911889:213941..214201	TCONS_00051243-exon-scaffold_20-1491911889:213941..214201	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1491911889:213261..213529	TCONS_00051243-exon-scaffold_20-1491911889:213261..213529	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1491911889:212146..212352	TCONS_00051243-exon-scaffold_20-1491911889:212146..212352	Clytia hemisphaerica	exon
TCONS_00051243-exon-scaffold_20-1491911889:204928..206061	TCONS_00051243-exon-scaffold_20-1491911889:204928..206061	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_20	supercontig	scaffold_20:204928..214201 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.07277	4.26256	4.12945	3.9235	44.5087	34.1162	25.7095	30.9925	9.62141	16.4329	8.49316	6.57459	7.75436	5.47232	7.51939	12.0731	12.9911	12.8073	3.71857	3.12801	9.13101	10.9498	7.84482	10.829	14.1675	14.1915	5.28837	3.84637	11.5293	13.2468

Blast

[Close]

BLAST of TCONS_00051243 vs. Swiss-Prot (Human)
Match: HNRL1 (Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens GN=HNRNPUL1 PE=1 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 1.209e-103
Identity = 177/390 (45.38%), Postives = 247/390 (63.33%), Query Frame = 3

Query:  600 MELDRYNSELHVKLSQDNLVGEILKGDGFQYMWGGVRGTHGVKRGMVCYEVHILEYNKV-DLPN-EKNPCVARVGWSVDGSDFQLGEDKLSWGYGGTGKSSVDSKFRDYGKPFGAGDVITCYVDL---NKVPKAIFFALNGEYLGVAFRFTNE-LGDKALYPHITVKNVTFRVNFGKEPPKY-PLTNGFKMIGTLXXXXXXXXXXXXKLEKEAEVIVMVGLPGSGKSYWCENYKREHPDKKYYILGTNLIIDRMKVSGLTRKRNYHGRWEELIKRASGVLNKLFTVTKANPRNYILDQTNVYFTARRRKMEAFRNYKRKAVVVVNKPPVLAQRIEKQRQLEGKVVPDQAIMEMKKNFTLPECGPSFDEILYVDEQLPTAREIVQQIRKEG 1748
            + +D YN +LH K+++D   G  L  +GF Y+W G R ++GV+RG VC+E+ I E   V  LP+ E +P V R+GWS+D    QLGE+  S+GYGGTGK S +S+F +YG  F   DVI C+ D    N V   + F  NG+++G+AFR   E LG +ALYPH+ VKN     NFG+    Y  +  GF  I  LP  + +    GPK + E E+++MVGLP +GK+ W   +   +P KKY ILGTN I+D+M+V GL R+RNY GRW+ LI++A+  LN+L  +     RNYILDQTNVY +A+RRKM  F  ++RKA+V+      L  R  K+   EGK VPD A++EMK NFTLP+ G   DE+L+++ Q   A ++V+Q  +EG
Sbjct:  211 VAIDTYNCDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDV--ELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVRQYNEEG 598

The following BLAST results are available for this feature:

BLAST of TCONS_00051243 vs. Swiss-Prot (Human)

BLAST of TCONS_00051243 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HNRL1	1.209e-103	45.38	Heterogeneous nuclear ribonucleoprotein U-like pro...	[more]

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TCONS_00051243 (transcript) - C. hemisphaerica