TCONS_00051223 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051223
Unique NameTCONS_00051223
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1712

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051223 ID=TCONS_00051223|Name=TCONS_00051223|organism=Clytia hemisphaerica|type=transcript|length=1712bp
AGACCGTATTTTAGTTTTAACGCCTCGCTTGGTGTAGAGAGCCTGGTCCG
ATTTGAAAGTATAAATCTTGCAAAATAACACTTCTCGAAATCATTCCAGG
CCGTCCAGACGGACTTCACTGACTGtgatttttgaaagtcaaataTTGAA
CTTTTACATTTCTTGGAGATttaactttgtttattttggttaTAAAGCAC
AAGCAAAGATGCCAAACATTAAGATTTTCAGTGGTAGCTCTCACATGGAC
TTGGCCAGGCTGGTTGCAGAGAGGTTGAACATGGAAATGGGTCGTGTCAA
ACTGAGGAAATTCTCCAACAAGGAAACTAGCGTGGAAGTTGGTGAGTCAG
TTCGAGGTGAGGATGTTTATATCATTCAAAGTGGATGTGGAGATATCAAC
GATAACTTGATGGAATTGCTCATCATGATCAATGCATGCAAAATTGCATC
TGCTGCTAGAGTTACAGCTGTCATTCCTTGCTTCCCTTATGCACGTCAAG
ATAAGAAAGACAAGAGCAGAGCACCAATTTCGGCCAAACTTGTTGCAAAC
ATGCTCTCTGTTGCTGGAGCTGACCATATCATCACTATGGACCTACATGC
TTCTCAAATTCAGGGATTCTTTGACATTCCTGTTGACAATTTGTTTGCTG
AGCCAGCGGTACTGAAGTACATAAGAGAAAATCTTCCTGATTGGGAACAG
TGTGTTATTGTCTCACCAGATGCTGGGGGTGCCAAACGTGTCACGTCTAT
TGCTGATCAACTGAATGTGGAATTTGCACTTATTCACAAAGAgAGGAAAA
AAGCCAATGAAGTGGATAGCATGGTTCTCGTTGGAAACGTGACTGATAAA
GTAGCGGTCCTAGTTGATGATATGGCAGATACCTGTGGAACTATGAAGTT
GGCTGCAAAAAAGTTGAACGAAGCTGGTGCAAAAGAAGTATACTGTATAT
TCACGCATGGTATCTTATCGGGTCCTGCTGTATCTCGTTTGATGGAATCT
GAAATCAAATCCGTCATCGTTACCAATACGATACCCCAAGAAGACAAGAT
GGCACAATGCCCAAAAATCAAGcTAATTGATATTTCACCCATCCTTGCTG
AGGCAATCCGAAGGACGCATAATGGCGAGTCAGTTTCATATTTGTTCAGT
CATGTTCCTCTATGAGTAACAAAAGAGTCATATGAAACTATGTATTGCAT
GCACCCTTGACTTTCAAGTATGGACATCCACTCTAGTTTTCGTACAGCTA
GAAGCTCTCACTCGAGCGTAATATTAGAAGAGCTTGACAAAGATGCTCTG
TCATAAAATGACTGATTGACATTAAATTGACACATTACTAACACTGACAT
TAACTGAGTTCAACTTTGTGTAATATAAGGTGGAGCCTGTCTTCGCCGCA
TAATAATTTATAAATagcttttgttttttaaaagttgTTCCCCTCGCATT
GTACAAAATAGTGttgttaatgattttttttcttaatgaTAGTTCAGCAA
CGTGCATCGTACTAGAAGTATGTTCATGCCGTTCTAGGTTCTTAGAGAAT
TTGTAGTTTTTTTCAGATTAAAATTTTCACCCGAATTTGTGTTCAATCGA
GTGttgagagaaaaagagagacaaatttattatttaaattcgttttataa
TGAGATTTTATTAacgttttaaaattgaaaatacatcAACATTGCTGGAC
ACTATAGAAATC
Run BLAST on NCBI

transcript from alignment at scaffold_20:40198..47726-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051223 ID=TCONS_00051223|Name=TCONS_00051223|organism=Clytia hemisphaerica|type=transcript|length=7529bp|location=Sequence derived from alignment at scaffold_20:40198..47726- (Clytia hemisphaerica)
AGACCGTATTTTAGTTTTAACGCCTCGCTTGGTGTAGAGAGCCTGGTCCG ATTTGAAAGTATAAATCTTGCAAAATAACACTTCTCGAAATCATTCCAGG CCGTCCAGACGGACTTCACTGACTGTGATTTTTGAAAGTCAAATATTGAA CTTTTACATTTCTTGGAGATTTAACTTTGTTTATTTTGGTTATAAAGCAC AAGCAAAGATGCCAAACATTAAGATTTTCAGTGGTAGCTCTCACATGGAC TTGGCCAGGCTGGTTGCAGAGAGGTTGAACATGGAAATGGGTCGTGTCAA ACTGAGGAAATTCTCCAACAAGGAAACTAGGTATAAATGTGATTTCTGCA GGTACTTTCGGTAGTTTTTGTTTAGGATACTTTGGATTTTGTCAGGGCAA AGGGGTAGATTTTACTTAGTTTTCTAGCTTACTTTTTTTTTATCTAGCGT GGAAGTTGGTGAGTCAGTTCGAGGTGAGGATGTTTATATCATTCAAAGTG GATGTGGAGATATCAACGATAACTTGATGGAATTGCTCATCATGATCAAT GCATGCAAAATTGCATCTGCTGCTAGAGTTACAGCTGTCATTCCTTGCTT CCCTTATGCACGTCAAGATAAGAAAGACAAGGTATACTTTTAGAGATTAT GAGTTGTGATTTCTGCCTTGTTTGAACTGCCGATTTAATAATAAAATGCA GTGGGGAAGTCCTGTTGTGATACCGTGAGATCAGGTAACTTGCATCAGTG GAGGCAAACATGCATAGCCCTCAAATGAATGACCTGTCTGGTCATTAAAT ACAACTACGCAGCTCCGCTCGCAGCTCTACTCTACCATTTTCGTTTTGAT TTAAATTTGTATTTTAATGACCAGCCAAGTCTTTCATTTGAGGGCTATGC ATGTTAGCCTCCACTGATGCAATTTACCCGATCTCACGGTACTAAAACAC TGAATACCTTGTTAAGGGAACTTATTTTGGCTGTAACTAATTTTGGCAAA TTCGATGAATTTAGGTGGCCATCGCAAAAATAGTTCTGTTCGTGTCACAA CAGGTGTTAAAAATGTGGGCGGACGGGCAGTCGAAAAAATTCCCGTTTTT TTTTAATCGCTTCTGTAAGTCAAGAAAAAAGCTATACGTCAAAAGAATTT GCTTTTTCCAGATTTTTTCCCGCATCTCCGCACCAGAAAATCAGGGGAAA CTATGATGCGGGCGGGTGACGTGAATAGAACAATTTTTCAATGGTCGCCC TAGACAAAATTCGCCAAAATTAGTTCCTGTCAAAATTAAATATTTGGTAA TTTACCTAAATAACTTCTTGAGTTCACAAAGAAAGCTTCAAATAAGACAA AATAGAACAAATTTACGCTGTCATCCGCCAAAATTAGTTCCCCCACCAAA ATTTAAAAAATTCATCAATCGCCAGCAATCGCCAAAAAATTCTCACCAAA ATTAAAAATTTTAAGGATTTTTGCCGCTCGTCAAAATTAGTTCCCGCCAA AATAGTTCCCTTAAGGTATATATTGCAAAAACTTTGGTGAACACAATGAT ATCATCAAGTACATAAATTTTTTCTCTGAATAAATATGAATTTTCTTCAA CTTTTGAGCAAAATCTTCAAGTTTTTTTAAGATCAGGTTTTCAACGATTT CAGATATTAACTTTTGAAAAATTCATTGACTCCTACCTAGGGGTTCTATT TTTTGCGGGAACTAATTTTCTCTGTGCGAGGGTACTAAATTGGCACATTT TGCAGAACTAATTTTCGTGGTTGACACACTCTTTTTGCTGAAATTCTTTC ATGTTCCTAGAAGTTTTGGAGGATTTTCAGTAAAATTGCATTTGGCAACA CGAATTTTTGTGGTAGACGTCAAATTTTATTTGGGTCAATTTTTGCTACA AATCTGAATTTCTATCTATCTATCTATCTATCTATTATGGTTGAGTTACA AGAGGCTCTGGGAGCCCATTCTCGCAACTATAGATGCTTTGAGTAAGCAT CCTGTCAGCAACTTGAACTGACTACCCAATTCCCCTCACATGGCATGGGT TAACCCAGACAAAGGTTTGTTCACTTGCCAAGTGAACTGGTGTGAGTGGG AATCAAACCTTGGTCGCCCATGCAGTAAGTTACAATTTCATTGTTTAGAG AAAAACAGAAAAATCGAGAATGCAAAAACTGTGATATAAGTATTTTCAAG TTGCAAATCTTTTCTTTTCTGTTACAGAGCAGAGCACCAATTTCGGCCAA ACTTGTTGCAAACATGCTCTCTGTTGCTGGAGCTGACCATATCATCACTA TGGACCTACATGCTTCTCAAATTCAGGTGTGGTATTTAATAAAATTTATT GTTGTGTTTATCTATGTAATCATTGTCAAGGCATCTCAGTCCTTTTTCCA ATAATGAAAAGCCTAATCCGATAACATTTTTATTGAGATATTAATAAACT TCAGTGCAACTTGCAAAGAGCAAAATAAAAGTATTCTTCTACTCATTGCT TTTATTTGAATCTTTACGTTTACATTTTCAGGGATTCTTTGACATTCCTG TTGACAATTTGTTTGCTGAGCCAGCGGTACTGAAGTACATAAGAGAAAAT CTTCCTGATTGGGAACAGTGTGTTATTGTCTCACCAGATGCTGGGGGTGC CAAACGTGTCACGTCTATTGCTGATCAACTGAATGTGGAATTTGCACTTA TTCACAAAGAGGTAAAATATATTCAAAGAATGTCATCATCCACCTGTATC CAAAGTGCTTGGCCAATTTGTAGAATGAAAGGGCAGCATCTGCTAGAGGG AAATTTTTTGTTTTTATCATCATTTTCATAATTAACAAAGGGCAGTGTCC AACGACCATATACTAAAATTGTCATAAAAATGGTCTTCGTGCTGCTTCGT GCTTCAATTAATTTTTTTGTAAACCTAAAAACTTTAGACTCTTATCAGAG GAGTGGTTAAAAATTCAAATTACAATGCCTTGGAACTCTATCTTTTCTAT TTCTGTACAATGTTTCTACTTTATTCACTTCACTCTTTTCTTTATAGGTG GTTTTTGGCTCTTAAAATTCTCTCTTTGTCATTCTAAAATACTATAACTT TTCGAAATAGTTGAATGAAAAGAAAGGGGGAAATATGGAATTTGTTTCGT TTGTAAAAGGCTCTTATGGTAGGTAAAACCTTACACAGAAAGTTAGATAT ATGATAAGCTAATGTGTTAAAGTATTATAAGATTCCAAAATACGTGTAAT ACTTAAGTGCTTAGCCTATCATATATGTAACTTGACTTTCTATTTTTTGT TGTATTGAAAATGTGATTTTCTTTTCTCTATAAAGAGGAAAAAAGCCAAT GAAGTGGATAGCATGGTTCTCGTTGGAAACGTGACTGATAAAGTAGCGGT CCTAGTTGATGATATGGCAGATACCTGTGGAACTATGAAGTTGGCTGCAA AAAAGTATTTCATTTATACTATGTTTGATTATATAGTAACCTTGCTCAGC TCGAATTGCCTATCTTTTGTGGTTATTCTGATTGCCTTTTGAAACAGTTT GAAATAAAATAAAAATTGAGGTACAATTTCATAAGTATAATCCAGTTTTG GACTTATCAAAATACACTGGAATAAAAAGATGCACTTTTTGGTTTTTGAT AGAGTTAAGATTTCGATGTATTGGCTTTATCAGCTGAAAATTTTTTAAAT CCGGTTAAAAGTCGTATGTCATTTCACAATTTTCGTCTAACGTTCGTTTA AGATTTCAGGTTTTAGTGTTGATAACCTTGCACTATTTCACAACTTTCAG GTTGAACGAAGCTGGTGCAAAAGAAGTATACTGTATATTCACGCATGGTA TCTTATCGGGTCCTGCTGTATCTCGTTTGATGGAATCTGAAATCAAATCC GTCATCGTTACCAATACGATACCCCAAGAAGACAAGATGGCACAATGCCC AAAAATCAAGGTATAGTATTGACTGATTTAATAACCCGAAGGGATAGATC AGTGGTAGGATTTTCTACTCGTCAAGTTATCGTCACAAAATTTTTAAAAG TTTACTGGGGAAGTAGCATACCTAGCTCTTAGAGCCTGATTAATATCTCT ATCAGATGGTCTCTTTTTGTCAAGACGAATGAGTTCCATAAAAGCACTAG TATGTTATCGAATCGGGATTAGATTTGTTTTCGATAAACAAATAAAACAC TATTTTTATGTACTCTAATTTTAGCCTTTACTAAGCGTTTCTGACTAAAA TCAAAGTATCTGCTTCATACATTGTTCCTTGGCTACAAATGAGAATCATC AGCTGTCCAAATTTGTAATCCAGATAAAAGATAATCTACTGACATCATTG TGGTCAAAGTTAACAAAAAGGATAATTGAATGAAACCGAGCAACTGACGT ATTGAGTTAATAACTTTCAACTTGTTTTGTTCTTTTAGCTAATTGATATT TCACCCATCCTTGCTGAGGCAATCCGAAGGACGCATAATGGCGAGTCAGT TTCATATTTGTTCAGTCATGTTCCTCTATGAGTAACAAAAGAGTCATATG AAACTATGTATTGCATGCACCCTTGACTTTCAAGTATGGACATCCACTCT AGTTTTCGTACAGCTAGAAGCTCTCACTCGAGCGTAATATTAGAAGAGCT TGACAAAGATGCTCTGTCATAAAATGACTGATTGACATTAAATTGACACA TTACTAACACTGACATTAACTGAGTTCAACTTTGTGTAATATAAGGTGGA GCCTGTCTTCGCCGCATAATAATTTATAAATAGCTTTTGTTTTTTAAAAG TTGTTCCCCTCGCATTGTACAAAATAGTGTTGTTAATGATTTTTTTTTCT TAATGATAGTTCAGCAACGTGCATCGTACTAGAAGTATGTTCATGCCGTT CTAGGTTCTTAGAGAATTTGTAGTTTTTTTCAGATTAAAATTTTCACCCG AATTTGTGTTCAATCGAGTGTTGAGAGAAAAAGAGAGACAAATTTATTAT TTAAATTCGTTTTATAATGAGATTTTATTAACGTTTTAAAATTGAAAATA CATCAACATTGCTGGACACTATAGAAATCATCGACCATCTCTTTTTCTTT GGATTTGACTTTATTTGAATTAGGGTTATCATGAACAAGGGTGCGATCAT GATTGTGAAATATCATGTCAATACCACTTCACCCTACTGAGAATGGGAAA TCTACCACTGGGCTTCAGATTACATTAATTCTGTGTTAATCCCTTATATT TGCAAATAGTATATCACGCCACTTTTATTTACTAGTTTTTTTTCAACTAC AGTATAATCACATGGCAACCTATTCGATTGCAATGAAAATATGCCTTGTG CTTGAGCCTTTTTGAATGTATATCGTGTTACCTCGACCTATTATATTTCT TTTGCAAATCTTAATAACAAAGATTGCAGGTGAACTTTTTTTTTGATTGA ATTTTAGCACTCTTTGTAATTGGACCACCCTCTGGTATTGATAAAATTTT TCACATTAACATGAAAGCGCATTGAAATTAGTCTGGGAATATGTGAAATT AAAGTTTGAGCTCTACTAGATGAAAACAATTTAAGTGGTCTGTCGGCTAT CTTTAGAACTACTAGTACAAATTTTAGCAAAGTCCACTTCAATTTAACTT GACACTTTTCCAGGTATTGGAAACTAAGCAAACTGCTACGTAACAAAGAA ACAAGAGCCGCAAAGATGCGGATAAATATTTCCTTTACAAATGTTAAAAT AATAATTGATGTCCTCAAAAGATTTCAAAGTGCTTTAAATCTCANTAGCA TGGTTCTCGTTGGAAACGTGACTGATAAAGTAGCGGTCCTAGTTGATGAT ATGGCAGATACCTGTGGAACTATGAAGTTGGCTGCAAAAAAGTATTTCAT TTATACTATGTTTGATTATATAGTAACCTTGCTCAGCTCGAATTGCCTAT CTTTTGTGGTTATTCTGATTGCCTTTTGAAACAGTTTGAAATAAAATAAA AATTGAGGTACAATTTCATAAGTATAATCCAGTTTTGGACTTATCAAAAT ACACTGGAATAAAAAGATGCACTTTTTGGTTTTTGATAGAGTTAAGATTT CGATGTATTGGCTTTATCAGCTGAAAATTTTTTAAATCCGGTTAAAAGTC GTATGTCATTTCACAATTTTCGTGTAACGTTTGTTTAAGATTTCAGATTT TAGTGTTGATAACATCTCTAAAAAAACCTTGCACTATTTCACAACTATCA GGTTGAACGAAGCTGGTGCAAAAGAAGTATACTGTATATTCACGCATGGT ATCTTATCGGGTCCTGCTGTATCTCGTTTGATGGAATCTGAAATCAAATC CGTCATCGTTACCAATACGATACCCCAAGAAGACAAGATGGCACAATGCC CAAAAATCAAGGTATAGTATTGACTGATTTAATAACCCGAAGGGATAGAT CAGTGGTAGGATTTTCTACTCGTCAAGTTATCGTCACAAAATTTTTAAAA GTTTACTGGGGAAGTAGCATACCTAGCTCTTAGAGCCTGATTAATATCTC TATCAGATGGTCTCTTTTTGTCAAGACGAATGAGTTCCATAAAAGCACTA GTATGTTATCGAATCGGGATTAGATTTGTTTTCGATAAACAAATAAAACA CTATTTTTATGTACTCTAATTTTAGCCTTTACTAAGCGTTTCTGACTAAA ATCAAAGTATCTGCTTCATACATTGTTCCTTGGCTACAAATGAGAATCAT CAGCTGTCCAAATTTGTAATCCAGATAAAAGATAATCTACTGACATCATT GTGGTCAAAGTTAACAAAAAGGATAATTGAATGAAACCGAGCAACTGACG TATTGAGTTAATAACTTTCAACTTGTTTTGTTCTTTTAGCTAATTGATAT TTCACCCATCCTTGCTGAGGCAATCCGAAGGACGCATAATGGCGAGTCAG TTTCATATTTGTTCAGTCATGTTCCTCTATGAGTAACAAAAGAGTCATAT GAAACTATGTATTGCATGCACCCTTGACTTTCAAGTATGGACATCCACTC TAGTTTTCGTACAGCTAGAAGCTCTCACTCGAGCGTAATATTAGAAGAGC TTGACAAAGATGCTCTGTCATAAAATGACTGATTGACATTAAATTGACAC ATTACTAACACTGACATTAACTGAGTTCAACTTTGTGTAATATAAGGTGG AGCCTGTCTTCGCCGCATAATAATTTATAAATAGCTTTTGTTTTTTAAAA GTTGTTCCCCTCGCATTGTACAAAATAGTGTTGTTAATGATTTTTTTTCT TAATGATAGTTCAGCAACGTGCATCGTACTAGAAGTATGTTCATGCCGTT CTAGGTTCTTAGAGAATTTGTAGTTTTTTTCAGATTAAAATTTTCACCCG AATTTGTGTTCAATCGAGTGTTGAGAGAAAAAGAGAGACAAATTTATTAT TTAAATTCGTTTTATAATGAGATTTTATTAACGTTTTAAAATTGAAAATA CATCAACATTGCTGGACACTATAGAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032470XLOC_032470Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051223-exon-scaffold_20-1575043694:47397..47726TCONS_00051223-exon-scaffold_20-1575043694:47397..47726Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1575043694:47096..47279TCONS_00051223-exon-scaffold_20-1575043694:47096..47279Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1575043694:45401..45499TCONS_00051223-exon-scaffold_20-1575043694:45401..45499Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1575043694:45016..45195TCONS_00051223-exon-scaffold_20-1575043694:45016..45195Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1575043694:44273..44391TCONS_00051223-exon-scaffold_20-1575043694:44273..44391Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1575043694:41316..41475TCONS_00051223-exon-scaffold_20-1575043694:41316..41475Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1575043694:40198..40837TCONS_00051223-exon-scaffold_20-1575043694:40198..40837Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:47397..47726TCONS_00051223-exon-scaffold_20-1510915933:47397..47726Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:47096..47279TCONS_00051223-exon-scaffold_20-1510915933:47096..47279Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:45401..45499TCONS_00051223-exon-scaffold_20-1510915933:45401..45499Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:45016..45195TCONS_00051223-exon-scaffold_20-1510915933:45016..45195Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:44273..44391TCONS_00051223-exon-scaffold_20-1510915933:44273..44391Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:41316..41475TCONS_00051223-exon-scaffold_20-1510915933:41316..41475Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1510915933:40198..40837TCONS_00051223-exon-scaffold_20-1510915933:40198..40837Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:47397..47726TCONS_00051223-exon-scaffold_20-1491911889:47397..47726Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:47096..47279TCONS_00051223-exon-scaffold_20-1491911889:47096..47279Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:45401..45499TCONS_00051223-exon-scaffold_20-1491911889:45401..45499Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:45016..45195TCONS_00051223-exon-scaffold_20-1491911889:45016..45195Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:44273..44391TCONS_00051223-exon-scaffold_20-1491911889:44273..44391Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:41316..41475TCONS_00051223-exon-scaffold_20-1491911889:41316..41475Clytia hemisphaericaexon
TCONS_00051223-exon-scaffold_20-1491911889:40198..40837TCONS_00051223-exon-scaffold_20-1491911889:40198..40837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:40198..47726 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.4181e-06 6.33555e-06 3.55547e-06 0.00192966 0.00125352 8.25686e-05 0.00572712 0.0127251 2.84867e-08 4.9316e-06 3.13481e-06 1.12181e-06 1.67551e-07 6.5395e-09 2.39492e-08 6.97317e-08 1.36789e-07 5.76292e-08 8.35542e-07 4.80269e-07 1.28073e-05 1.66923e-06 3.27273e-06 1.18268e-06 3.57448e-06 0.0174079 0.000107812 3.01696e-05 2.42e-05 3.67309e-05
Blast
BLAST of TCONS_00051223 vs. Swiss-Prot (Human)
Match: PRPS2 (Ribose-phosphate pyrophosphokinase 2 OS=Homo sapiens GN=PRPS2 PE=1 SV=2)

HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0
Identity = 257/318 (80.82%), Postives = 291/318 (91.51%), Query Frame = 2
Query:  209 MPNIKIFSGSSHMDLARLVAERLNMEMGRVKLRKFSNKETSVEVGESVRGEDVYIIQSGCGDINDNLMELLIMINACKIASAARVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLFAEPAVLKYIRENLPDWEQCVIVSPDAGGAKRVTSIADQLNVEFALIHKERKKANEVDSMVLVGNVTDKVAVLVDDMADTCGTMKLAAKKLNEAGAKEVYCIFTHGILSGPAVSRLMESEIKSVIVTNTIPQEDKMAQCPKIKLIDISPILAEAIRRTHNGESVSYLFSHVPL 1162
            MPNI +FSGSSH DL++ VA+RL +E+G+V  +KFSN+ETSVE+GESVRGEDVYIIQSGCG+INDNLMELLIMINACKIAS++RVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNL+AEPAVL++IREN+ +W+ C+IVSPDAGGAKRVTSIAD+LNVEFALIHKERKKANEVD MVLVG+V D+VA+LVDDMADTCGT+  AA KL  AGA +VY I THGI SGPA+SR+  +  ++V+VTNTIPQEDKM  C KI++IDIS ILAEAIRRTHNGESVSYLFSHVPL
Sbjct:    1 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL 318          
The following BLAST results are available for this feature:
BLAST of TCONS_00051223 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRPS20.000e+080.82Ribose-phosphate pyrophosphokinase 2 OS=Homo sapie... [more]
back to top