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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051189 ID=TCONS_00051189|Name=TCONS_00051189|organism=Clytia hemisphaerica|type=transcript|length=3062bp
TGTCAAACAAGatAACGAACAACTTGCACGATCCGGCGTCAATTGTCTGG
AAAATTTAGTCGTATCGAACGGTCAAAAATTCACCCCAGAAATCTGGACC
AAAACCACAAAATGCATCCGTCTCATCTTTGAATCCAGTGTTCCGCATAA
TCTCATTTCGTGGAAACCAGAAAATTATACTCCACCAGAACACCCGGTCG
GCACACCGACCCACCATGCTAAATCTCCATCCACACCGTCCGGTACGGGA
CATGTCCGGCGACCTTCACGAACACCTTCTAGACTAACAGTAGATTCTGT
ACCAGaaggTGACTTCCATTATGACGTCAGTGAAGGTGACGATATTAGTT
TACATAATTTCCCACAATACCCTGCACATTTACAACGCTTCGATTCTAAC
ACAAGTCTAAACGCAATAACACGTCAAAAAATATCGCCAGAGAAGACAAT
GTTCAATTCAATGTTGATCAAATGTGTGGTGCAACTGGAATTGATACAGA
CCATTGATAATATTGTTTTCTTCCCGACCACAAGTAAAAAAGAAGATGCA
GATAATATGGCTGCCGCACAGTCAACGGAAGCCGAGCAAGTGTCTTCGCT
GTTAGATGTCGGCATGTTCCCTCACCTGAGTTCAGAGCAACTTCTACTGT
TCGCCACTTGTCTTCACGAAGCGCACATCTTTGCGCGTGATTTCAATTGT
AATTACGAGCAAAGAAACCTACTATTAAAAGCAGGATTTACGAAAGGCAA
ATCACTTCCGAACCTGTTAAAACAAGAAACGACCAGTTTAGCATCATTAC
TACGCATCTTATTTCGCATATACTCCGAAGAATCTCGACAAGAAGCTTGG
GAGAGCGTCGAAGAAAAACTGAAACGAGTCACAGCAGAAGCATTCGAATA
TTTTCACAATTTGGAATCATCCAGTCATCGCAAAGCATGGACATCAGTGC
TTGTACTCATCTTAACCAAATTACTCAAACTAGACGATCAAAGGttttca
agaCATGTAAATTCGTTTTACTCTCGCTTATGTGATTTACTGGTACACGA
ACTGGAAAGCGAGTTACGTGTCGTTATACGCAAGATCTTCTTGAGGTTTG
GTCAAGTACACTCGGTTAGCTAATAACAAAGAGATTGAAATCGAAATTGC
TTTGTCTGGTTTGTATTGCTTTTTTACATATTTCACCTGTGATATGTTTG
TTTTGGCTCCAACTTTGATTGATGTTAAATTTCTTCGAATCTATACGGAC
AATGGGACATTTTGATGATTGAATTCGATTCTATCCATCTAAATACTCAT
GCTTTCAGTTACTATTGATGAATATAAACGTGGCTTTTCATGGACTCCAC
TTTGTTTGTTATAATGAAAACCATGCAAAATATACATAATATTTCCCTCT
TTTTGGTGGTTAATACGCCTACGCAAGTCAAAAGCTGACTTGACTTTACT
CCTACAAACTACACATGACAGATGGCAATTTTAATGCAATTCTTTGATGA
TTGATTATGATTAGTGAAAGGCTCAAATTATGAAACACAAGAATTACGCA
AAATGGATATAATTAatagttttttttctcgaaaatttaaatcaatttct
gttcacatttttttaatagatttagTAATTTTTGCGCTACGTTTTGTTTG
ATTAGAGGTCTCTGTGGAAACTCTGAGATGTAAAATATAATCGATTCCCT
GTCGACCTGTTTCGCTTTTATggaataaactttcgcggggattaaatttc
gcggttgggcctatccgtgaaactcaaaatttcgctgggacttaatttcg
cgggtggcactatcGGGTGACAacattttcacgattttgtatttttatac
tGTCAAgtcatgcatattggttgtttAAATACAccttgcgcctctttgat
gcaagtattatttatttgacatattttgagttttgtttagaaatattacg
cggatgaggcccttccaaatttccattgggacttaatttcgtggattttc
gcggatgacacccaaatctgcgaaatccgcgaaatttaatccccgcgaaa
gtttatcccattaaagtatgtgGTACCTTTTTTCTGCGTGaagaaatttt
gattatttgacTACTTTTAGATTAATGATCAACTCAATACACTTCTAGAT
AAAGAAACGTTGAAATAATTAGagatataaaataatttttgcaaactaaa
ttatgataattatgtgcattttttcaagaaaCAAGAACGGTGTAATATTT
aaggtttttatattttttatttttactataCAAAATTTGAATTATGTTTG
ATTGTTGTCCCCTCCGCTTGATAAGAAATCATTGTCTGTAGAATTTAAGG
CATGTATTTCTCCTTTTATTAAAGTCAAAGTTAATCATGAACGTTTGCTG
CCTCGGCAAGATTCAGGAttagaggttttgtttttaaataagactgatat
cgtttgcttactcatcaattttaattcacaagctttttcacatagAATTG
ACACGGACGTGGAGCAAGATTgctcagaaagaggaaaagaaaaagcattt
tttgcttgtatcaccataatataacaataggcagacactgtcctgatatg
aaatatgtgtccgatatgaaacgggaacatttatgtaaaaataaaacctt
taattactAGAGTACTAACAGTTGGATTAACTACATGGTTTTCCATACAA
ACCTGTCTTGACATCAAAACATCTGTTtagttttgtttatttcaaaaaat
ttgctgATCTTGTTAACAGTTCACTAGCTACCTAGATAAAATGttaagat
atatttttttctactttttgggATATTTTAACTTATTCTACAACACTTAA
ATACAAAAACGtctgtaattttttttgttttaaacccTTATTTCTTTCTT
ATATACTGTAATACAGAATGATAATTTTGCGAGATGTAAACGACCAATAT
CAGATTGTTGTACaattttccccaatttttttaTTAGGTTATCTCCCAAT
TTATGAATttgtagatttcatttacatattttaaaCTTGTTCTCCTTAAT
TTTTTGGTATAA Run BLAST on NCBI transcript from alignment at scaffold_2:238965..254903- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051189 ID=TCONS_00051189|Name=TCONS_00051189|organism=Clytia hemisphaerica|type=transcript|length=15939bp|location=Sequence derived from alignment at scaffold_2:238965..254903- (Clytia hemisphaerica)
TGTCAAACAAGGTTCATTAAATGATTACTTCGAGAGAACTAATTTTCGTG
ATTTTGGGTGTCTACGGCGAAAATTAGTTCCGCGAAATGCAATTTTTACT
AAAAATTCCTAGAAATATGAAAGGATTTCGGAAAAAAGTGGGTATCAACC
GCGAAAATTAGTTCCGCAAAATGCGCCAATTTAGTACCCTCGCACCGCGA
AAATAAGTTCCCGTGAAAAGTAGTCCCCTTAAGGCAGTAACTAGAATCTT
TTTAATATATTGGTAGATCCAGTGTTACATAAGCTAAAATCTAAATCTGG
ATTGCATTGTGAGTTCGAGAAAATATTATTTTGTGTTTATGAATTTTCAC
GCCTTATAAATTCTCAATGATTTTTGTTTTGTTTTGTTTTTTTACAGATA
ACGAACAACTTGCACGATCCGGCGTCAATTGTCTGGAAAATTTAGTCGTA
TCGAACGGTCAAAAATTCACCCCAGAAATCTGGACCAAAACCACAAAATG
CATCCGTCTCATCTTTGAATCCAGTGTTCCGCATAATCTCATTTCGTGGA
AACCAGAAAATTATACTCCACCAGAACACCCGGTCGGCACACCGACCCAC
CATGCTAAATCTCCATCCACACCGTCCGGTACGGGACATGTCCGGCGACC
TTCACGAACACCTTCTAGACTAACAGTAGATTCTGTACCAGGTATATTAT
AGTTTGCTTTTCTGGTTTATTCACTCGTTTTAGTTTAATCGGTCAATTTC
ATTCATGCATTGGAATTACTCTTTTGCGAAACTGTTAAAGGTATTACCTT
TAAAGGGGAAAATTTTAACATTCAACTTCATGGAAGCTTTGACAAAGGTT
TTTCACAAGTGTAAGTTTTCCTCCGACTTAAATTTGCCCCGACTAAAAGT
TTTAGCTGCCTACATTTTAATTTTTTTCATTTTGTTTTTCTTTTGTGCAA
AATTGCTTGATTAGTTTTCTCTGATTTTTGGCAGAAACGTAGAGGGAAAG
GTTCTCTAAAGAGTGGCTAAAATCATGGAACCCGATTTTCGAAAAAATTA
TTTTTTGAATCATGCTTCTTTTTTTTCTTTCAGAAGGTGACTTCCATTAT
GACGTCAGTGAAGGTGACGATATTAGTTTACATAATTTCCCACAATACCC
TGCACATTTACAACGCTTCGATTCTAACACAAGTCTAAACGCAATAACAC
GTCAAAGTAAGCTCTATAATACATGTAGTACTCATTGTTATCTTTCCAAC
TTTCAACACAAGAGGGGTCTGGATCGAGTTTACCAGCGTTGAATAACGTC
AATTATTTATAACAAAGTCAATAGCTTGACACAATCGGGTAACTTGACCA
AAGCATATTAATTTTGAAACATGTTTCGGTATTTTGAAGCATCATCAGTA
ATTATTTTTTTTAAGAATAAATAAAAAGTGTGCTAATATGTGCTTTATTT
GAGTTTTATAACAAAAAGATATCAGCTAAATACAGATTTTCAAAATCATA
TAAAATCATATAAAAAGTAACTCTGAAAGTTTTCTGGATGTTGAGCGCAC
CCAATAAGCATTAATTCCAAAGATATTCTCTACGTCAAACATTGACGTTA
TTTTCACCCTGGTAAACTCAAATCCAATCCTTCATGATATGTACCATTTC
AACGTCTTTGATATTACATCACGGACACAACAGCTGATTGGTTGTAAGTG
ACGTATTAACTCGAGTACAACCAATCAGCTGTTGGATCTATGGTGGAGAC
ATTGCAATGGTACGTATCACGCTTAAAGGTTAATAGGTGTTTCCCAAAGA
TATCTTATAAAAAACTCTAGATAGAGCTTTTCCTACCCTACTTGAAGCAA
AATGATTTGCCATCTTAAATGAAGTGACGTCTCAATTTAGCTTGCGAGAT
TCTTGAAATTTGAAGTCTTTTTACTATGACCTTCTTTCAGCAAAGATGAC
GGATTTTTTTTACTTCGCCAGCCGTTGCTGGGGAAATACAGAGCAGCTCT
ATCTAGTGTTCTATATAAGATATCTGTGTTGTTTCAATTTCACATGCAAA
CACATTCGTCCACATATAACCCAAATACTAATAATACACGCATCACTAAA
AATTATTTCTTCGATCATTTAAATTAACTGCTCCTTTATACTTGGAGAAA
TTTAGAGCACAACGTCATTTATAATTGTTAATCCTGAAATTAATTACCGA
GTATTCTCAAGCTTTTCCCAGTTACTTATTCCACTCTTACCGACACTTCC
AACAACAGAAATATCGCCAGAGAAGACAATGTTCAATTCAATGTTGATCA
AATGTGTGGTGCAACTGGAATTGATACAGACCATTGATAATATTGTTTTC
TTCCCGACCACAAGTAAAAAAGAAGATGCAGATAATATGGCTGCCGCACA
GGTCTGTATAATATATGTTCTCATCATCCGTTTTTGATTTTTAAAATCTC
ATACAGTTTAAAAAAATAAAGATAGGATAAGTTTGATTGGACTTCTTAAT
AAACTCCCAATGCTTTGAAAGACGTTGCATACTTTGTGTCGTGCTACTCA
TGATATTCATAACGTAATATTTTCTACGGAAAGACCCCGGTTTTTGCCAG
TAGTGGTAAATTTTATACAACTTTTGTCTAGTTTAAATTTGCCACTGCTG
GCTATAACCGGGGTATTTCCGTAGTAAACATTATGTCATGAATATCATGA
ACTATAGAACAGTTAGTCACTCCAAAATATTTTAGAAACTGCAAACTAAT
AAGCCTAATATCTAAAATGTCTAAAATAAAATTGTCAATCTTTAATATTT
TAGGCTTTTTTCGATAACATATTTCCGGAAGGCAATTTCAAGGTAACTAA
AAATAAGTATTAAATACGACTTTAATTATATTTGTGGTCCTGCGAATCGA
TGTAATTGCAGTAACTTTGGTTTCTAATTTCTGAAATTAAACATTCAAAT
TTTTTTTAAGTTTGTACTAAATAACTATAAAGTGTTTGAAAAAACTTAAA
TATTCAATCAATTTCGATTGCTAAATCCATTTTTTAGGTTCATTAAGTTA
TGTTAAACTTTAAAATAATATTATATAATAAATATTAATTTATAGAAATT
ATCAAGAAAAAGATTCTGTGTACATACCGAGGGACTTGTTGGTCATTGGT
TTGAACAAGACTTTAATCGCCTATAATCACTAATAACAAAATGCGTAAAT
TAATACTGCGTACATGTCTAGATTCAGTCAAGTATACTCTCAAGTCTTAA
CTTCGAACACTGGTCTTGTCACAACTCTATGCTTTCGTTATCAAACATGG
AAAATAAATTATTCATACAATCTATTTAGTCAACGGAAGCCGAGCAAGTG
TCTTCGCTGTTAGATGTCGGCATGTTCCCTCACCTGAGTTCAGAGCAACT
TCTACTGTTCGCCACTTGTCTTCACGAAGCGCACATCTTTGCGCGTGATT
TCAATTGTAATTACGAGCAAAGAAACCTACTATTAAAAGCAGGTACGTTT
GCTGTATCTAGTACAGGTTTTTTATATGAGAACATCCAGACTTTTTGAAG
CCTTCGGATGTTCTTAACCTTTTGAGTTTTAAACCTAAAAATGTTCTTAA
CATGGTCTTATTTTCCCCATTTTGAGTATTTATTGTCAATTTTCCTAAAA
AAATCTTTAAACTATATATGATTTCTCATTTCTCTGTATTCATCAATCTG
GCCTTTCAAATGACCTTTAAGGGAATACTGAAAACTTTCCTAATTGATAA
AAATGTCTGGAAAATGTTGGGCATTTTGCCAAAATGTCTGGAAAACTTTT
GACATTTTCAGGTGAAAATTTGAAAAAAAATTGGCTTTCATGACTAAAAG
TCTAGAATTTTCAACTTGCAAGCCTGTAACAGATGATGTTATCGTCCGTT
ACAGTGATAGTAAAGGCGGGAAAATATGGTGGTATGGCGTTATGGCGTTA
TGGCGGTATACGGGAAAAAATCGGTGGGAGAGTTTCGAAGGAACGACTGG
CAACTCTACCGACTGTAAACTCTTTTCGGCAAAAAAACCCGTTAGCGAAT
TTTCTTCGGCTTTGGGCTTTTTTCTTGTAGTGATTATTCTTAGACTATAT
ACATAGTCTTAGTCTGTAGCAGCCCTGTATACTGGCTAGGAAGTTATAAC
AATTTGATTTTTAATCTTTAGGATTTACGAAAGGCAAATCACTTCCGAAC
CTGTTAAAACAAGAAACGACCAGTTTAGCATCATTACTACGCATCTTATT
TCGCATATACTCCGAAGAATCTCGACAAGAAGCTTGGGAGAGCGTCGAAG
AAAAACTGAAACGGTAAGCCTTTAAAACCAGTCTCGTCCAATAATCTTTT
GGGTTTGACCGGAAACCTCAAATAATAGTTAAAATTGCGTTTTGCGGCGT
CGATTCTTACTTAGACTTTTTTTTAGCTGAATATGGCACTCTGATCAAAC
ATATCTTTCATCCGATTTTTCATAGAACTACAACAGAAACGTTCGAATAT
TTTCGTAACTATACTCTACTTTCGAATCTTTTCAAAACTTTTTTTATTGT
TCAACGATTTCTCATAGAATCAAAACAGAAGCATTTTCGAATATTTTCGT
AATTATACTATACTACTTTCGAATCTTTTCACGACATTTTTTTTATTGTT
CTACGATTTTTTCATAGAGTCACAGCAGAAGCATTCGAATATTTTCACAA
TTTGGAATCATCCAGTCATCGCAAAGCATGGACATCAGTGCTTGTACTCA
TCTTAACCAAATTACTCAAACTAGACGATCAAAGGGTAAGAGAAATTTCA
ATTTCTTTATTTGCAGACTACACGTTTTTATTTTTAAGAAACACACTTTT
AAGAAACATGAGGCTCAGAATGCGCCTAAAAACTAAGAAACATGCTGAGG
TCGAGAATGAGAAAATAACATTTTTTAATTCGTTTTTTTTTAAGAACCTT
CCAATCAAGGCAAAGTTCCAGAAATATATACTTACATAACAGTTAGAAAC
ACTTAAGAAAGTCAGAAAATAAATATAGAAGATAGGAAAGTACCGTAGAT
TTAGTCAATTAGACTATTGTATGTATTATCGACATGCGTCCTTTAAGCTT
GAAAAAGTTTAGAAACATGTAGAAACATTTAAGGCTCAAAAGGCAGATTT
CTTACGAAACATTGCGGATGCTTGGTAAAACTAGTTTCTTAAAAAAAAAA
CGTGTAGTTCCAAATGAAATGAAGTAACAGTTATCTACAAGTGACGCTCT
CTAAATCAATTTTCAAGGAGTATTGGATTTTTATCGAATAAAGGAGCGTA
TCGAATAATAAAGCTTCGTTTACCAAAGTTTCTCGTTGGCGGTGACTTTC
AATACTATCGAGTAATGGAGCGTCTCAAATTTAGTAGAACGTCGAATTAG
AGAGCGTCAGCTGTACACTCAAACACTGGTAAAACTTTGCTCGTTTATAA
GAGGAACCTCTGAAACTTTCTATTTTATTCATTCGCTCTTCCTCTTTGTC
AGAACCCAACACTCTAGGTATATGACAAACACTAATGTTTAACAGAATAA
TAATGTAAGGGCTTCATTTTTGAAACCCGTCTTGAAGACCAAGTTTGAAC
AGGATGGAAAATTTTGTGTCAACTTATCTATAGATGAGTCAAATTATTTA
TCAAAATTAAACTTTTTAAGAATGCTTCAAGTCATAAATTAGTTTTTTTA
TCTATAAATGAATGTGATCTATTTATATTATATTAGTGCTCAAATTTCAG
TTGAATATTATTCTATTACCAATTCCATTGTTTAAAACAATTAGTCCATC
ATCCATGAATTTTTTTCACGCGAGAAACCATACATAATTAATAATTAGTA
ATTCTACGATAGATGTATCGTATTGTCAGTTTGTTTCACAGTAACCTTAA
ATTGCAAAATCTTTTGTTCGTTCATCCTTCATTCATTCATTCATTCATTC
ATTCATTCATTCATAGTTCGTTTGTATTTGACTCTATCATCAATCTATTT
TAAAAGAGTCATTTGCTCAAACCACTCACTTCTCGGTTTTCTTTTGTTTT
CTGTCGGTGGATGAAATTTCGTCTTCTCCTATACAAAGACCATGTTTTGC
GATTACAAAAACACACTAAGAAAGTCAGCATACCTCGTACACTTCTTCCT
AAACTGCATATGAATGCGAAAGTTGCATTCAAGATGGCTTCACTCTCATT
CAAATGACTCTTGTACAATTGTACGGAGCCGAAGATTTCGGGAATCACAA
GGATGGTAATTATCTTGGACGTCGTAGAAAGCGTGGATCTGAGATTTGGG
TAAATTGCGTTTCTCTCTTCTGATTGGCTACTCGCATCCTCCCTCTTTTG
ATTGAGGCGAACACATGCAACAACCATGAAACATAAGGCCATCATATAAC
AAATGGCCGTCGGTAGAAGATAGAAGAAGATTCGTGGATAGTGGTTCTTA
ATCCAAAAAGCTTTGTTACCACGTGATTCTCCGTATTGGAACTCGTAGGC
TTTTGATTGGTCCACACCAATGCATACTGCTGTAAGAAGAAAATTCACCA
ATAAGCAGATTGTAAGCTTATTCAATTTATGAAATCTACTTTTTGTGTTG
TCCACTTGGCCACGATTATATCGCGTCTTTTTTACCAAATGAACGGATAA
AAGAGCACTCCAAGTGTTCACAGAAAGAAAACTAAAATGTTGAATAATAG
CCAATGCTTTGAGAGCTTTTATCCAGTGCGTTGCCTGTTTAACTATACTA
CTGGTTATCGAAAGTGCATCAGTGAGCAGAAGGAGAAAGTTTAGAATGGC
TAAGTTATGGTATGATTGATATTGCATATCTTTGAGCTGATGAAAAACTG
CCACATAGAGAACTTCGAATATTAGGCTCAACACTGACAGACAGGTGCTG
GTGTAAAAGTCCACTTCATCCAATATTGTTTTCCATGTGTACTGGTGAAA
GGATGGTTTTTGCTGGTCAAGGTTTGGAGCGTCGTATAGCGATTCATAAC
ATATTCTGTATTTTCCGTCACCAAGGGGTAAAAATTGTGTAGCATTTAAC
TGAGAAGAAGTGTTGTCTGGTTTCATGAAAGTCAATACAACTTGGTCGTT
GTAATCTATATTGCCAGATATATCCATTGTAATACCACTTGGACAATCTT
CCGAAAAATAATACTCCGTGCAATGCGTCACAAACTCCTCTCTTGGCCAA
CTGTCGTCCGCATAGGTAATGGAAAGTCGTAAGTTCTGGCGTTCAATGGT
TGTAGTAGAATCTGGGAAACGATACTGACAGTTTTCAGTGATTTTACCAC
CAGCATCAAGGTTTAACCGAGACGGTAAATAGCAGATGCGCCCATTACTA
AAGTAATTATGCTGCATAGGTAGCTCCATTATCGTCTTTGGTGATTCAAC
TGCACTGATTTCGACCGTTAGGACAGAAGCGTCGTAAATGTGTAAATGTG
ACTTCTCTAATATGTTGGTCACTTTAATGTATTCCTCCTCAGTCTCCAAC
GTATGATTCCATTGTAGAATGTGAATCGTGCCAAATGCCTTGTGCACTAG
TTGAAAGGTAGCATTGCCCATATTGCCGAAGTCTTTCTCAAAAGCTTCAT
AGAAGGATTCCCAATTGACTGTAGTTTCAGTTTTCGGGTAATAATAAACG
TAGAAATATAAAGGTGGCATCATACACTTTTCGACCGCCGTCAATTCTTT
GTTGACTGGTTTTCCACCACCATCACCAGTGTCCGGATTAAAAGCACCAA
ATCCGGACACCACCTTCATGCATAAGAATATCATACCTACATGAATGATC
ATGAATGGGTAGCCAGTCAAATGAATCTTCATTTTGATTTTCGAGAAGAA
ACCCTGCTGAAATAATCTTCTTCAACGTTTTCCTCATGCACTTGAAAGGT
TTGGTGTGAACCCAACTTTGCATGGGGTAAGAATGGTGTGTTTTACAGGT
TTTGGAAGACTTTTAAAGTAATGTTGCCCCATATCAATACTAACGGGAAA
TTGGTAGTACGCATGCGCCTAAAAACATACTAAATTCGTAATACACATGC
TCCAAAAAAAAACATTAGTCTTCTTTATAAGGAATATAATCAAACGGAGT
CTCGAATCTTTTTGGAGCCTTTGAACCTTCATTGTAAAATCAAATTGATT
AAGAAAAGATAAGTTACATCGATTTTAGTTTAGATTTCTAATTGTTATCA
ATACCAAATTCGTAACACACATGCTCCAAAAAAACATTAGTCTTCTTTAT
AAGGAATATAGTCAAAAGGAGGCTTTAAACCATCATTATCAAATACCAAT
TTGTGTATTTCTGATTGTTATCAAACATTTAATGTTTGCCATTTACAAAA
AAGGAAATGTAATTGTAAAGGGAATAGAGACGACCTTATCATTACAGTAT
GTCTTGCAAGGTTTTTGAAAACATCTTATCTTAGCATTTCTCTATTTCTG
TCCTTTGGTTGTGCTACAATGAACTTTTGATTTTTGATAAACTATCGTGT
CTTTGTATGACTTTTAACCGGCAGTATACTTCATATCGACATTCCTGGCA
TTCAGTCGCACACTCTTTTTTTTTATAAAAACGTCAAAAATTTTTGGAAG
CCTTCGGATTTTCTGAATGCTTAAAATACTCTAGTTCTAGTGTTTTTAGG
TTATTCGAAGTTTTGGAGTTTGTAATAAGGCAATAAACTATTCTTATATA
GTTTGTTTCTAATAAAAGAAAAGGTGTAACTATACACGGTAATGAATAAA
TTGAAATATCATGGTGAAAGAAAGGGAGACGAAAATCATATATCATCGAG
TGCCATAATATTGTTGTTAAGAAAAATGAAGATAACATAGTCTGGCATGA
TAGAGACTAGAGCTTCCTGTGCACAAGATAAAAGTTGTAAGATGTTTTAA
AAGAGGGTCCGATTATTAGCAGATTGGATATAGGACCTTAAATACTTTGA
AAATAAAACCCAAACATGGCAATTTCGATGAAACATTCCTACTCTCGGGT
TCCTAATTGCCGTCCCGCCCCCGCTAATTAATTTTTCGAAGATTTTCCAC
CCATGACATTCTTATTCCACCCCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTCCCCCCATGACATTCTT
TTTCCCCCCCCCCCCCCCGCTTATTAATTTTTGGAAAAATGTTTTTGAAG
GTTCCCCCTTTTGTCCTAATTCTGCTGTATTAGCCTCCTTTTCAAAAATT
TTCCAACCAGGACAACCTCCCCCCTCGCTTATTAAGTTTGGAGATTTTTT
CCATTATTCAACATCTTTCCATGAGTTTCCCGAAAGTTTTTCTGTATGTG
CACCATCGTTGATAAAGGTGGAGAAGGTGAAAATTTTGAGAAAAATGCCT
CGTTTGAACTGTTGCAGGCTCATCTCGATTCACAGATGATGGAATGTTTT
TACAGGGATGCCTAACCTTGTAAATAAGTGCTTTTTAGATAAGATAAGAT
AAGATCTTTCGGTTTTAACTCGAATAAAGCTATGTACATTTAAAAAAAAA
ACCACGGAGGGTGCATATAATATAAGTGAAAAAATATAAACCGTAAAAAG
GATAGCTTATTTTGTCAAGAGGCAATAAACCATACGGACAGCTACTAAAA
GCTAGAAATTATATGGGAACCTAGTTTGTTGAAAGTTGACAGCATTGAGT
GCTGCAAGACATGTACTGGTAATGTAAAATCGCGTAAAAACAAAAATAAA
TATATACATCCTAGTGAAATAGGTACTAAAAAGTTCTAAGACGAACATAA
AATGTGATATATAATAATATGGGCCTAAGAATTTCCAGATTTTAAAATTG
TTTTTTTTAGTAATTTGTATGCAATCTCAGAGGAAACTAAATGATTAGAG
ACACAAGGAAAAAGGGGGACTCTGCAAAAAGAGAATGGAAGGAAAAGCGA
GGAAAGAGGAGAGAAGAGAGGGATTAGCAGGTGCAATGGATGTCATAAAT
CAGTTTAGGAAAAAACAACAGGGGGATCTGGGGGGGATGGATGATGATGG
TGAAGCATCAGTTCGTACTTTCATATGAAGGGTTTGAGAACCTAAGAGAA
GAATTAAATAAGATCGAATATTAACTTGGCTTTTATGTGACGTTTAAGGG
AGCTTTTTGAGATAGCCTCAGAGTTGAAAGGGTTTAACTTTAGAATTATT
TGATTCCAGCTTCTTGCAATAGAGTTTTTCAGGCTGTTAGACCCATAGGA
GACTGATTTCGAAAGGACAAATGCTAGCTTTCCATATCTGTTTCCAAGCT
TATTTACAAAACCATCGAAGTAATTAGGAGATTTATTTTGGATAACTTCA
AGGGCGAAGATTGAGTGTTTCAAAATTATTAGAGACTCAATTTGGAGGAT
TTTTGATTGAATGAAAAGAGGAGTGGCCGAGTCCCTAGGGCCTTTGAAGT
GAATCAGTTTGAGTGCTTTTTTTTGTAGTGAAGAAAGTTTATTGAAATGA
TCTCGTTTTATGAAACCAAGAGTGTGAATACAATAACTTAGATGCGATTC
AAAAAGTGCATAGTAGAGTCCAAGTAGACTTTTGTAACAAAGAAAGTGTC
TCATTTTGGTCAAAATACCAGCTGCTTTAGAAAGTTTAATACAAAGTGCA
TTGATTTGTGCATCCCGTGCTCGTCAATTAGAATACCAAGGTATTTTACT
TGATTAGTGAGTTTGAGTTATTGTCCACTGAGCCTGAAATTTAGATTTTT
GTTGAAGTTTTTGCCTTTTCGACGAAAAATGACAATTTCAGTTTTTTCAG
TATTAAGACTGATGGCATTTGATCTGAGCCAGATAGCAAGGTTTGTAAGA
TCTTGATTTATTCTACTATTTAGTTTTTAAGTGACTTATCACGACATAGT
GACTTATCATTTTACATAATGGAAATACATAGAATGCATCCCCCCCTGGC
TCTTAGGGGGGGGGCTAGAACCTAAAATTCTGGCTGGGGACTCTTTTTCC
CTAAGATCAGGGGGGGCTACTTACTCAGGGGGGGGGGGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGCCAAACC
TTCAGGGGGGGGCTTCAACCCCTCTGCACTCTATGAAATACATTTCCTTT
CCATTTTGGTTACCTCACCTTTTCGAACCAAGGTTTGAAAGGAAAAGTGG
AATAATGAGAAATCAGCTCTCTGTTTTGTTTCAGTGTAATGTGCACGAAA
AAAATAAACACTTTGTTTTATGAGAACAATTTTATAAGAACAATGAGGAT
CAAAAACACCAAAAAATAAGAACAATTTAAGAACAATGCTGAGCCTCAAA
TTGCTAAATTTCAAGCAATTTATGGGTCAAAGTACTAAAAATTGGGGATA
AAGCCTAACATATCTCCATTTCAACCTATAAATAAGAACAGGATAAGAAC
AATTTGAGGCTCCAAGTGTCAAACAATAAGAACAGCCGATCCTCGTCAAA
TTCTACTGATTCTTATAAAAAAGAGTGTATTAGTTGAACAAACTTATCCA
TTGGATAGTTTTTTCTAAATATGTAGTTTCCAGCCCATCAGGGTTAGTTA
GTTGATATTTTTTGTGCAAATCACATCACACGGAATCTAAGCAGATAAAT
AATTCAAAGTCTCTGTATCTTTCGAATCATTCTAAACCTTGTGGGTCAAT
GAACGGGGTCAGGGTAGGCAACTTTTTGTCCGAAGAGGGCAATTATTTCA
AATGACCCTTTGAACAAACCAATGACTTATTATGATTTCTGCCCGGGGGG
GTACTAGGTTTGCGAGGTGACGGGTATGTCCGAGCCGAAAATCGAAAATC
GACCCTTTGAGAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNAATTTTTGATTTTTGTGATTTTGGGACCCTTTCAGAGACTA
ACTTTTGAATTTGTACCCCTTTGAGAGACTTTTGAGGAACGAGAAAAGGT
ACCCTTATGGCTTGCACATGCCCGGCACCCATTTTGCCTAAGTAACCCCC
CCGGGGATTTCTGTCTAGAAAGACAAAACCCGGTTGATAATCGCCTTTTA
TTTCTTGTTTTTCTTTTTCAGTTTTCAAGACATGTAAATTCGTTTTACTC
TCGCTTATGTGATTTACTGGTACACGAACTGGAAAGCGAGTTACGTGTCG
TTATACGCAAGATCTTCTTGAGGTTTGGTCAAGTACACTCGGTTAGCTAA
TAACAAAGAGATTGAAATCGAAATTGCTTTGTCTGGTTTGTATTGCTTTT
TTACATATTTCACCTGTGATATGTTTGTTTTGGCTCCAACTTTGATTGAT
GTTAAATTTCTTCGAATCTATACGGACAATGGGACATTTTGATGATTGAA
TTCGATTCTATCCATCTAAATACTCATGCTTTCAGTTACTATTGATGAAT
ATAAACGTGGCTTTTCATGGACTCCACTTTGTTTGTTATAATGAAAACCA
TGCAAAATATACATAATATTTCCCTCTTTTTGGTGGTTAATACGCCTACG
CAAGTCAAAAGCTGACTTGACTTTACTCCTACAAACTACACATGACAGAT
GGCAATTTTAATGCAATTCTTTGATGATTGATTATGATTAGTGAAAGGCT
CAAATTATGAAACACAAGAATTACGCAAAATGGATATAATTAATAGTTTT
TTTTCTCGAAAATTTAAATCAATTTCTGTTCACATTTTTTTAATAGATTT
AGTAATTTTTGCGCTACGTTTTGTTTGATTAGAGGTCTCTGTGGAAACTC
TGAGATGTAAAATATAATCGATTCCCTGTCGACCTGTTTCGCTTTTATGG
AATAAACTTTCGCGGGGATTAAATTTCGCGGTTGGGCCTATCCGTGAAAC
TCAAAATTTCGCTGGGACTTAATTTCGCGGGTGGCACTATCGGGTGACAA
CATTTTCACGATTTTGTATTTTTATACTGTCAAGTCATGCATATTGGTTG
TTTAAATACACCTTGCGCCTCTTTGATGCAAGTATTATTTATTTGACATA
TTTTGAGTTTTGTTTAGAAATATTACGCGGATGAGGCCCTTCCAAATTTC
CATTGGGACTTAATTTCGTGGATTTTCGCGGATGACACCCAAATCTGCGA
AATCCGCGAAATTTAATCCCCGCGAAAGTTTATCCCATTAAAGTATGTGG
TACCTTTTTTCTGCGTGAAGAAATTTTGATTATTTGACTACTTTTAGATT
AATGATCAACTCAATACACTTCTAGATAAAGAAACGTTGAAATAATTAGA
GATATAAAATAATTTTTGCAAACTAAATTATGATAATTATGTGCATTTTT
TCAAGAAACAAGAACGGTGTAATATTTAAGGTTTTTATATTTTTTATTTT
TACTATACAAAATTTGAATTATGTTTGATTGTTGTCCCCTCCGCTTGATA
AGAAATCATTGTCTGTAGAATTTAAGGCATGTATTTCTCCTTTTATTAAA
GTCAAAGTTAATCATGAACGTTTGCTGCCTCGGCAAGATTCAGGATTAGA
GGTTTTGTTTTTAAATAAGACTGATATCGTTTGCTTACTCATCAATTTTA
ATTCACAAGCTTTTTCACATAGAATTGACACGGACGTGGAGCAAGATTGC
TCAGAAAGAGGAAAAGAAAAAGCATTTTTTGCTTGTATCACCATAATATA
ACAATAGGCAGACACTGTCCTGATATGAAATATGTGTCCGATATGAAACG
GGAACATTTATGTAAAAATAAAACCTTTAATTACTAGAGTACTAACAGTT
GGATTAACTACATGGTTTTCCATACAAACCTGTCTTGACATCAAAACATC
TGTTTAGTTTTGTTTATTTCAAAAAATTTGCTGATCTTGTTAACAGTTCA
CTAGCTACCTAGATAAAATGTTAAGATATATTTTTTTCTACTTTTTGGGA
TATTTTAACTTATTCTACAACACTTAAATACAAAAACGTCTGTAATTTTT
TTTGTTTTAAACCCTTATTTCTTTCTTATATACTGTAATACAGAATGATA
ATTTTGCGAGATGTAAACGACCAATATCAGATTGTTGTACAATTTTCCCC
AATTTTTTTATTAGGTTATCTCCCAATTTATGAATTTGTAGATTTCATTT
ACATATTTTAAACTTGTTCTCCTTAATTTTTTGGTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051189-exon-scaffold_2-1575043694:254893..254903 | TCONS_00051189-exon-scaffold_2-1575043694:254893..254903 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:254213..254506 | TCONS_00051189-exon-scaffold_2-1575043694:254213..254506 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:253698..253820 | TCONS_00051189-exon-scaffold_2-1575043694:253698..253820 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:252503..252645 | TCONS_00051189-exon-scaffold_2-1575043694:252503..252645 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:251412..251574 | TCONS_00051189-exon-scaffold_2-1575043694:251412..251574 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:250591..250732 | TCONS_00051189-exon-scaffold_2-1575043694:250591..250732 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:250119..250236 | TCONS_00051189-exon-scaffold_2-1575043694:250119..250236 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1575043694:238965..241032 | TCONS_00051189-exon-scaffold_2-1575043694:238965..241032 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:254893..254903 | TCONS_00051189-exon-scaffold_2-1510915933:254893..254903 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:254213..254506 | TCONS_00051189-exon-scaffold_2-1510915933:254213..254506 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:253698..253820 | TCONS_00051189-exon-scaffold_2-1510915933:253698..253820 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:252503..252645 | TCONS_00051189-exon-scaffold_2-1510915933:252503..252645 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:251412..251574 | TCONS_00051189-exon-scaffold_2-1510915933:251412..251574 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:250591..250732 | TCONS_00051189-exon-scaffold_2-1510915933:250591..250732 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:250119..250236 | TCONS_00051189-exon-scaffold_2-1510915933:250119..250236 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1510915933:238965..241032 | TCONS_00051189-exon-scaffold_2-1510915933:238965..241032 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:254893..254903 | TCONS_00051189-exon-scaffold_2-1491911889:254893..254903 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:254213..254506 | TCONS_00051189-exon-scaffold_2-1491911889:254213..254506 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:253698..253820 | TCONS_00051189-exon-scaffold_2-1491911889:253698..253820 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:252503..252645 | TCONS_00051189-exon-scaffold_2-1491911889:252503..252645 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:251412..251574 | TCONS_00051189-exon-scaffold_2-1491911889:251412..251574 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:250591..250732 | TCONS_00051189-exon-scaffold_2-1491911889:250591..250732 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:250119..250236 | TCONS_00051189-exon-scaffold_2-1491911889:250119..250236 | Clytia hemisphaerica | exon |
| TCONS_00051189-exon-scaffold_2-1491911889:238965..241032 | TCONS_00051189-exon-scaffold_2-1491911889:238965..241032 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:238965..254903 - |
Blast
BLAST of TCONS_00051189 vs. Swiss-Prot (Human)
Match: BIG1 (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2) HSP 1 Score: 308.145 bits (788), Expect = 1.273e-86 Identity = 182/378 (48.15%), Postives = 237/378 (62.70%), Query Frame = 2
Query: 2 VKQDNEQLARSGVNCLENLVVSNGQKFTPEIWTKTTKCIRLIFESSVPHNLISWKP---ENYTPPEHPVGTPTHHAKSPSTPSGTGHVRRPSRTPSRLTVDSVPEGDFHYDVSEGDDISLHNFPQYPAHLQRFDSNTSLNAITRQKISPEKTMFNSMLIKCVVQLELIQTIDNIVFFPTTSKKEDADNMAAAQ--STEAEQVSSLLDVGMFPHLSSEQLLLFATCLHEAHIFARDFNCNYEQRNLLLKAGFTKGKSLPNLLKQETTSLASLLRILFRIYSEESRQEAWESVEEKLKRVTAEAFEYFHNLESSSHRKAWTSXXXXXXXXXXXXDDQRFSRHVNSFYSRLCDLLVHELESELRVVIRKIFLRFGQVHSVS 1120
V+QDNEQLARSG NCLEN+V+ NG+KFT EIW KT C IF++++PH L++W+P E PP PV +P T S+ +VD H + S+ N PQ P + N ++ I PE+ +F ++LIKCVVQLELIQTIDNIVFFP TSKKEDA+N+AAAQ + + + D GM+ L+S+QL CL E+H FA+ FN N EQR L KAGF KGKS PNLLKQET+SLA LRILFR+Y +ESR AWE V+++L V +EA YF L S SHR+AWT++L+L LTK+LK+ D RF H + +Y LC+++ +L ELR V+R+ FLR G V +S
Sbjct: 1489 VQQDNEQLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPNSGETAPPPPSPVS------------------EKPLDTISQKSVD------IHDSIQPR---SVDNRPQAPL-VSASAVNEEVSKIKSTAKFPEQKLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGF-KGKSKPNLLKQETSSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQIS 1837
The following BLAST results are available for this feature:
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