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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051181 ID=TCONS_00051181|Name=TCONS_00051181|organism=Clytia hemisphaerica|type=transcript|length=469bp GAGCACTATTAATGTCGTTAATTGTtgtaaaaaaatgtcttgagaATATC AAAGCTTGATTCGAAGACTATAaaagtcaaaagtaaagttAACATAGTAC ATACTTTCAAGAGGGTGAGAAATCTATACAAGAGACGTTTAGGCgaagaa tctctaaccttttcaACAAAATGGAAAAACTTTTCGTAATGGCTATTTTG CTTATTGCAGTGATTTCTACCTCAGATGCGAAGGCTATCAGCGATAAAGA TTTACTGGACGCATTAAACGACTTTCTGCATAGAGACgcccaaGGACcca agtcgttcgtccaaggtggagacgaAAAATCTTTGAATCACAAAGTCAAT TCTGCTGAAACGGAAAAAAGGAACGTTattgttaatgttaatgtttaCTA AACTCAAattattttactaaaatttgtCTCTTTTGAAAAGAATATGGAAA TGCTAATGAAACTAAAACA Run BLAST on NCBI transcript from alignment at scaffold_2:468182..470737+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051181 ID=TCONS_00051181|Name=TCONS_00051181|organism=Clytia hemisphaerica|type=transcript|length=2556bp|location=Sequence derived from alignment at scaffold_2:468182..470737+ (Clytia hemisphaerica) GAGCACTATTAATGTCGTTAATTGTtgtaaaaaaatgtcttgagaATATC
AAAGCTTGATTCGAAGACTATAaaagtcaaaagtaaagttAACATAGTAC
ATACTTTCAAGAGGGTGAGAAATCTATACAAGAGACGTTTAGGCgaagaa
tctctaaccttttcaACAAAATGGAAAAACTTTTCGTAATGGCTATTTTG
CTTATTGCAGTGATTTCTACCTCAGATGCGAAGGCTATCAGCGATAAAGA
TTTACGTAAGTTGAAAAACTTTTCAGTTCTTTACTCTTTCACTCTATGTG
ACATTCTCaaactttaaaactttttaaacctGGCTATGATAGCTCTTTTC
AGTAAGTTATAGCCGAAGGCTATTAGATCTGTATCTTCTAATTAAGATTT
GAAGCCACTTAAATATTATTCAAAGCCCGAAAGGCTTAGAGAGGAATCTT
GAAACTCCCATaagcaagaaaaaatgaagcccTAAGATTTGCGCCACTTT
AGCAATGACTGATTGAATCTAGTACTGTCTTAGTTTTCATGCAGCGAATT
TTTCTATTTCTCCCCTTTTTAAATCTTAGACTAAAAAAGATTAAGGTCAT
TAAGAAGTTTAAGCAGTCCCAAGTGAACTCTAGGGAACGTGTTTGTGAAA
ACTATGTTATAGTTTACTTTAATTCTCGAGTAATACTCTGcgatttctat
ttttttcttacAGTGGACGCATTAAACGACTTTCTGCATAGAGACAtcca
aggacccaagtcgttcgtccaaggtggagacgctCAAGGACNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNAAGTCGTTCGGccaaggtggagac
gcccaaggacccaagtcgttcgtccaaggtggagacgcccaaggacccaa
gtcgttcggccaaggtggagacgctcaaggacccaagtcgtttgTTCAAG
GTGGAGACGctcaaggacccaagtcgttcgttcaaggtggagacgcccaa
ggacccaagtcgttcgttcaaggtggagacgcccaaGGACCTAAGTCGTT
CGTTCAAGGTGGAGACGCTCAAGGACCCAAATCGTTCGTTCAAGGTGGAG
ACGCTCAAGGACCCAaatcgttcgtccaaggtggagacgctCAAGGACCC
Aaatcgttcgtccaaggtggagacgctcaaggacccaagtcgttcgtcca
aggtggagacgaAAAATCTTTGAATCACAAAGTCAATTCTGCTGAAACGG
AAAAAAGGAACGTTattgttaatgttaatgtttaCTAAACTCAAattatt
ttactaaaatttgtCTCTTTTGAAAAGAATATGGAAATGCTAATGAAACT
AAAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00051181-exon-scaffold_2-1491911889:468182..468436 | TCONS_00051181-exon-scaffold_2-1491911889:468182..468436 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1510915933:468182..468436 | TCONS_00051181-exon-scaffold_2-1510915933:468182..468436 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1575043694:468182..468436 | TCONS_00051181-exon-scaffold_2-1575043694:468182..468436 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1491911889:468895..468926 | TCONS_00051181-exon-scaffold_2-1491911889:468895..468926 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1510915933:468895..468926 | TCONS_00051181-exon-scaffold_2-1510915933:468895..468926 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1575043694:468895..468926 | TCONS_00051181-exon-scaffold_2-1575043694:468895..468926 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1491911889:470412..470421 | TCONS_00051181-exon-scaffold_2-1491911889:470412..470421 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1510915933:470412..470421 | TCONS_00051181-exon-scaffold_2-1510915933:470412..470421 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1575043694:470412..470421 | TCONS_00051181-exon-scaffold_2-1575043694:470412..470421 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1491911889:470566..470737 | TCONS_00051181-exon-scaffold_2-1491911889:470566..470737 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1510915933:470566..470737 | TCONS_00051181-exon-scaffold_2-1510915933:470566..470737 | Clytia hemisphaerica | exon |
TCONS_00051181-exon-scaffold_2-1575043694:470566..470737 | TCONS_00051181-exon-scaffold_2-1575043694:470566..470737 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_2 | supercontig | scaffold_2:468182..470737 + |
Blast
The following BLAST results are available for this feature:
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