TCONS_00051172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051172
Unique NameTCONS_00051172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length971

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051172 ID=TCONS_00051172|Name=TCONS_00051172|organism=Clytia hemisphaerica|type=transcript|length=971bp
CTTAGATTCACCAACGGAGTGTTTATGTGGTATAGCAAAGGATGTGTTAA
ATACTTCAGATCCTATGAAAAAGTCAGAACTGACACGCGCACACTACGCC
AATTGGTTGAAAGAACGTTTTTCAGTGGGATATGCGCAAATGCCAGATCA
ACCCAAACGTCAAGAAGGTCTACAAATCAAAGACCCTGGAAGAATCAAGA
GAGGGAAGGGAGGAACACTTGAGAGCCGTGTTGCAATGATCCATTCTTTG
GCAAACATTGAACAATGGGCTATTGATTTATCTTGGGATGTCATGGGGAG
GTTTTCAACAGTTAAAATTAATGATAAACCACTTCCGATGgaatttttcg
atgattttatcaaagtCGCCGACGATGAAGCCAAGGCGAcattttgcaAT
GTTGAACGAACGATTGGAAATTCTGGGAAGCTTTTTTGGTGCATTGCCAG
TACACAATGgtttatgGCAGTCAGCAGAAGAGACATCTTATGATTTACTT
GCAAGGTTAGCTATTGTACACATGGTACACGAAGCAAGGGGTCTTGATGT
CCACCCAAAgacaaaacaaagatttggtgCACAGAAAGACGAGGATTCTG
TCGCATTAATGGATGTTATTTACCGTGATGAGATCACACATGTGGCTTGT
GGAATGAAGTGGTTTACATGGCTTTGTAAAAATATGAATCCCTCATTGgA
GCCTGTAGAGACATTCCATAAATtggtcaaaaaacattttaaGGGATATT
TGAAGCCACCATTCAATACAGAGGGCCGTTTGATTGCTGGTATGACTGAT
GAGtggtATACTCCATTGGtcaaaaaatgaatattttacgtattttgtaa
aattttaaagattttaactgaATGATGGTACGTAAAAGAAACATGTTTAT
AAGTCAAATATTTCgttctctttttttcttgcgaacatttttttctcaaa
ccctGCGAACATGTAATGTCC
Run BLAST on NCBI

transcript from alignment at scaffold_2:183594..205917+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051172 ID=TCONS_00051172|Name=TCONS_00051172|organism=Clytia hemisphaerica|type=transcript|length=22324bp|location=Sequence derived from alignment at scaffold_2:183594..205917+ (Clytia hemisphaerica)
CTTAGATTCACCAACGGAGTGTTTATGTGGTATAGCAAAGGATGTGTTAA
ATACTTCAGATCCTATGAAAAAGGTATTTTATCAAATGcttataattcat
gatatgcaccattgcagtGTCTTCCACGGAatcaacagctgattggttac
aagtgacgtattgactgattttactgattttgtcACTTGTAAGCAATAAG
TTGTTggatccgtgatgtaatgtcagaagacataccaaagtctttgtttt
tttttgttggcTTTTTCACGGTTGGCTTTCACCGGATTAATGCATTAGAT
GATATGTGTCAGAATACATGCATTTCATATTAGCAGATttatgtaaaaaa
gtcacgaaaaaacgtctagtaaagctctgattggctgaatatTGCACACA
TAAGcatactttttcaaaatatgcagagtatgaggtaatctttgcacGTG
TCAGCCAATTagagctttactcgacgttttttcgtgactttttttacatg
aatctgctacacgttttttttttataaggaacattAACTTTGctccgagc
ctggagttccttatttttacagataatttcagtctcaaagttccttatcg
agttccttactacataggaaactttgaactttttgccccttgaaagatca
aaatttggtcaaattagtcccaataaggtacattattttcaaatccactt
attctcagcctgagcagttccttaacaattccttatttttttttaaccat
tttcagcctcgagttccttataaacgtgttccttatataaaaaaaaacgt
gtaataggAAAAACCTCTATTGCAGGGAAACGCACTCACATCGCGTGAGC
GGTTAGAAGTCAACTGCTAGATAGCACAATAAAGGACTATAAGCATCCAC
TGTATAGAGAAGGCAGTCGTCGTGGAATACATGTTGTTTCGATAAATACA
GAAAATCTTTCTCCTCGAATCTCTTTTTATGTCATTATTTATACCGCGTT
CTTCTTTACATTAACAGTCAGAACTGACACGCGCACACTACGCCAATTGG
TTGAAAGAACGTTTTTCAGTGGGATATGCGCAAATGCCAGATCAACCCAA
ACGTCAAGAAGGTCTACAAATCAAAGACCCTGGAAGAATCAAGAGAGGGA
AGGGAGGAACACTTGTAAGTATTTAGATAATACCCCAGTCATCTCTTTCA
TGCCAAATACTGTATACAATTGGTTTGAACTGGATAATTCAGTCGGTAGA
GTAGTCGGTAGAGCAGTTGCACTAGTAATGCAAAAGTTCGAGAGTTCGAA
TCTCACTTCAGTCCTCAGTTTAGTAGTTCTCTACCAAACTGAGGTCAATG
ATGGTAGTTCGGGTGATGCTAACGGATCTACGACTTATTTTGAGTTGACA
CACTTGATAATATTTCCCGGCCACCTGCCAGTAATTTGAAGAATAAACAA
GAATAAACATGAATTttgaagctcaaaattttatcaagctTGATAGTTTG
GATTgaagggtgtcccgaaaaatgTCCTTTGTCAGAACACGAATACAAGA
GAAACTAACAAGTTTTAATATTGCGACCGTTAATGTCTGAAAAAGACGta
catgaaatattttttattacacAATTGATGTGTTCTGacacaaaagtttt
ttttcgtgaCACCCTGTAGAGAGATGGAAGAAGGGCAACAAGCGTTTTCC
CTTATATTCACTTCACAGGAGAGCCGTGTTGCAATGATCCATTCTTTGGC
AAACATTGAACAATGGGCTATTGATTTATCTTGGGATGTCATGGGGAGGT
TTTCAACAGTTAAAATTAATGATAAACCACTTCCGATGgaatttttcgat
gattttatcaaagtCGCCGACGATGAAGCCAAGGCGAGTATGCAAAGATT
CTCTATGTTTTGATTCTCTATAgcttaacctgagatcagattctgcccac
cacgctgaagctcttaGAGAATGgctgaaaacataacaatctgacgaata
agctatctcaaaatcgtaaggaccgcgctCGTCTAATGGACTGGGtcaca
acaaagttgcgtgattatGTTTATGATAAGGGTGccgtatcaggaaaatt
tagttttttactttccggcgcacaacaagattcttgttgtagaattttcg
gCGGGAGGACTTTTTTTCTTCCGATGGTTAATTTTCtagcgcctttagag
gtttaccgtgcgcgtaagaaaattataaacagctgttatcaggttactaT
AACTCGTTTCttctaccctgagtatcagaggttaagttttcaaagaaaat
agtaacctctgaagacaaataatagaaattttatcgcgcatgtgtcaatc
taatcactgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNcaaaagaaatcttttacatgatccccaaatgtataacagt
aattactaaacttttaattatggaaatgtcactttaattgaatcgaaaNN
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caacgacgggaataaagatatcgactatgacgctcatccaagatcttgga
tggtcgtcatggttacttttgtcttcgctgattgcgcgatgaatagagct
gtgcttttcacggtacgtTTCTTCAGCTCGCAAGTCTTCTACGTTCATCT
ATAATTTAAACAAATGGGCCTTTtcttaaattattttgagtgcaacgatT
GCCTCGTTTTAAAACCAATACCGAGGTCATAATGTTCCTTGAGTCTTCAA
AAGTTAATTTTTAAATACCGTGAACCTCCTATGAACTCTTTTGGAAATCA
ATTACCATAACAATAGTTTCAAAAACGGGTTCAGCGTTGTTCGTGattaa
atttatgaaaaggtctatttttgcGTTACGTACTTGCACGGAtaaaggcc
tgtttccatcgatcgtGCGAACGTGCACGCTAgggcaaaatttcctaaaa
tagccTATTGACTACAcgaattaaattttcttgtaCACAAAAAGTGTACT
CTCTTGTACGCTTTTGTGCTCTTTTCtacgctgaaaattttcaatttttt
tgagcgTACAGGATCGCACATctcaattgataatttttcaaccaatcaag
aaagagaaaaactgctgagtaaacaaaaaatgtaaacatacagattgtgt
atgtttttgatggaaattaaACATTGATCGCGCGGAGTGTGCGGCCAaat
ctattttaagaattttggcctagcgtgcacgctcgcgcgatcgatggaaa
caggccttaaGTTCAAATAATGATGCAGGTAAATTTCAACACCGGTGCAt
tcatctgtttttttttagcattttgcaATGTTGAACGAACGATTGGAAAT
TCTGGGAAGCTTTTTTGGTGCATTGCCAGTACACAATGGTAAGAGTAAGT
CACGGGAGAATGGCGTTGTTGACTTCAAAAGAAAATCCCATTCAcaaatt
tttctttagtttttaaataattttttaatcagTGACAAAGTTGTAAAGTA
AAGGATAATCAATACGGTTATACGTTTAATAAGCGTTATCCAGAACCAAT
ATAAAATCGACATGAAAAACACTTCAGTTTCTTCAGTTGCATTTAATGCA
AATGTAATGAATGTTGTCCAAGCTCAACTAATTACTgactttcaattctt
ttttttttaggtttatgGCAGTCAGCAGAAGAGACATCTTATGATTTACT
TGCAAGGTTAGCTATTGTACACATGGTACACGAAGCAAGGTAAATATctc
gttttacttttttttgaatCTGGTCTCTTTTTCATGGAAGAGTCCAAGCA
GGTCCAAGGCGTTATTTAAATCCAATAATAGCGAGTTTTTATATTTGCAC
CTTTTAAGAACGATATAGTGacttggaataacccgcagttttgacccgcg
aAATCAAGGacagtaaaagtgctgatttaccgtcgtcctcagtcagtcag
tcagtcagtcagtcaggatgtagacaaattagaaccttaccgtctccgtc
gcagtaAAACACATATATACATTAACTTGGTAACATCTATACAACAACTT
CAAAATCAGGCTGCTACGATCTAGCCTGGAAATCCTATTTAATATTGTTA
GCATAGTTACTATTCATACATAACCTTAAAGCCTATTTTTGGTTGTGGAC
ATGTGGAATTGATCGATTTTTATTTGACCGCTTAAGTAGTTTAACTGTAA
TTTAGTTGATAACCAACTCAGCGCCAGGGCCTGGAGAATGGGCGGCCGCC
TTCCACCCTTTTTGTCTAAATATCATTACTTTGGGTCTATATTGTATTCA
AAATGGCAGAAGTGAACCGAAAGACTGGCTCTTTCGATCTTTCGGTGAGG
GATTTGAAGCTCAATGAGAATCTTTTTTACCACCCTCCCGCCCTAAAGTT
ATGGTTGTATGCAGTCCTTATAAATAGGAAAGATGATTGTATAGGTGGGG
ACAATCTTACCCCAAAACTTATGCTTAAGAGGCTAACCAATATTTGAGGC
CAAAACCTATACAATACGTCTTTGGTCCGTCTTATATtatactagccata
gctttcactaactgccacccgctacaGATGCCTATCTATAAGCATTTATA
AAGACTAATTAATGCttattaaagctttttaatgcttattaaagcttttt
aatgctttatagcgaaagtttggaaatgattatagaaataattcgaatga
ttcttctcaaaagcattttctttgagatatcaacgATAAAGCTTAcataa
atgaaatatatttttttctaaaaacgtGAAATACCTTTACAAAtaataaa
atacgaatcttaaaatattcattagcaaaagtgtccaggtagagTCAATT
ACAGATACTAAAACACTCAAAAGACATGNNNNNNNNNNNNNNNNNNNNNN
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aaaaattatttgtacTTACTGTCAAAGTTCCATAATACaggatttttaag
cattgttgttgggagtagagtatgctgaatgacgattgtcgaacaatttt
cgttacaagggaatttcgttgccaattcaaccaccaaaaataatcacttt
tgtccatattcattgattgttctactattatcatttttatcattgttcat
tattgttCTGTGGTAAAGATTAAACATCAATTCACATTCACATTATTGTA
ATCAACTTGGAACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAA
ATAATACGTAATTTCAATAATTctgtataaaaatataatatccttcaaat
ttattataaagatataaaaaattcatgtattacaaaacaatataatattc
taTAAGTTaggataaaaaaaataatactaaTGTAAAGGATTTGAAAAGTC
TAGGCAAGTATCCCATCAAAAATTcctcttaaaacaaaagaatgttttcA
TCTATTGTTCTGGGGAATTATTCATAGGACACCCTGTAGTTGGACcagtt
ttgaaatctttcttatctaaaattcatcaattttttcatgaTAAAAAGTA
CTAAATAATTTCACTCGGAATTATTTCAAAGGAAGAGAAAATAAAGGAGa
acagaaaagaaaatattgctTTTTGCTAAATATCCTTCCCTGCCCTGAGC
CCCCCCCCCGTGCAATGATTTTGACATGACATATACTAAATTATTCCATC
TTATTACTTCTAAGGCTTGTTTCGTGCTGCTAATTCTTCNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNaacacaaaaacaaaaacaattcgcaaaaaa
tcgagattccagtccaatatattgcgtgaagctatgagtgcctcctcagt
CGCTGCGCTCCTTGCGGGGGCAATAAATTAGAAGTTAaagtacaaaaatt
attttatgatCAACTGTATCCCACATTGATTAATGTTTTCTCAGCTATTT
TCTCTTCTCAAATCTCAAACAATAATAGACACATATTGCATATTTTATTG
GATAGATCTTGCAGTGAACATGCAGGTCAAGTGTTTTGGattggaaataa
gtggcttcatttcccatccagaagttTCGAATATAGCCCCTTcagggctt
tgaaatcaatgctCCCACTTATCAATAAATTATATATGCAACTTCTTTGT
GTTCGTACTGTACATTAGAACGGAGTTTTTAAGCTCTGTGAAATACTTTT
ACCACATAAAAAATACGGGTGTATTCGAGGAAAGAATTGCACGATCTTTC
ACCTTTGTCTTATATTATCTAACTTTAGACGATCTCGtgattactctcgg
gtacctaatagccggggggtttggaaaaaatctcaaaacttaactACATC
TGCTCTAATCGTATTGTTTTATTAATTTGGCATCTATTGTTATTAAGTAC
TTATCATTTTTGATAGTATATTACTCATCAGGGGGTATAAAGTAGCAATT
TCAAGGGTAATTCTGTCTTTCAAATTCTTTAGTAAACCTCCTGAAAATTT
CTGGCTTCTTTGCGGTGACAAAGAGGTATATCCTACGTCCTTTGTTGAAG
GATAAGAGCTTTTAaagaagttttttaaatttttaaattaattcttcTAA
TTCTTCTTTGGTATATTTTGCCATTCATGTTATTGACTTAACGTGAGGCG
AGCTGCATCAAGAGATTCGGACCATATTGCGCCAACACAAGAATAACTCA
TAATTTTGGCGGCAAACTAAGTAGTAAACTGTGAACTGGAGTGAGATTTG
AACTCACGACTTTCGCATCGCTTGTGATCTACCGACTGAGTTTTTCATTC
AAAGCTGGAAAACATATCGCAGAAAACAGCGTCGGTCAGCCTACAGCTTC
TTCTTTAATATCGAAGAAGAGATTTAAATTTAGATAAGAGTATGGAGTGC
GTGTCAATTTTGACGGATAATCAGCGTTATACAATCGTCAGCTTATATAC
CGCTATCGCTGCTCTGGGTACCATCTTGAATGGTCTTTCACTGTATTGTC
AATGGAAAACCGGCCGGCGCCGACCCCGTGAGTTTGATAACTCCGCTCGG
CTTTTACTTAGTTTGAATTTGTGTGATTCTTTCAACTGTATGTTTGTCTT
ACCAGTTTTCTGTGCAGCCTACCAGTATTTGAAATTGCGATCAAACTGTA
CCGCTCTTAAAACACAAGCCTTTTTCAACAACTTGAATGGGCTTTACTCG
TCTTGTCTTATCATCATAATAACTTATAACAGATATTTAAAGATTGCCAA
ATTCGCAACGTACTATCACATTATGTCACGGAAACGAAACATACTCATAA
ACTTGGCTGCATTTCTGACTTGTGTTGCTATCTCATTGGTAGCAATCGTG
AATGTTAAATTGATGCTGTTAGTTGTAGTCATATTTGTTATTTTCACAAT
GATATCAATGCCCATCCTCTACACTTTGTTATACAAAATGATGCGGGCTA
ATCAAAGAGTGGCGCCGGCCTGTCAGCGCCGCAATCGCAATACTAAAGTA
CTGAAGAATTTACTTTTGCTGAACACTTCTTATTTGGTGTGTCATCTGCC
AGTGTTGTGCCTTTTAATTTATTCTTTAATAACAGATGAGAAAATCTACT
ATGAGGCACTGATTACACATGCTATCACAGCAATGTCACCTGTCTTGAAT
CCTATCATTTATGTTTTGAGAGATACAACATCCCGTAGAACTCTGAAAGC
CTTGTTACGCCTCAATCGTGTTTTGGCGCTGTAAACATGTTTCGGATGGT
AAAATGATAAGAACAACACATACTACACAAACGGTATTACCTATTCTTCG
CCATGTTATGTAATAATGTACCTTTTAACCAAAAAGGGTTGTTTCATTTC
GAGGAGAAAAACGAAAACTATGGCTTTACTCACTAAAAAGTTTTGTTCGT
TGAACAGACACAATTTATCGCGGggatttattttcgcggatttgggtgtc
atctaCGAAATCAAGTTCCaatggaattttgaaagacCTTATCtgcgaaa
tatttttgagaaaaactgcTCATTACCAGACATGTTTTCTCGAAAAATTT
ACTTAgatgaaattaaaatttgttaAAGGCTATATGTGACTTTTTAcaat
ttgaaagtaaaaaagaaatgttTAGATTAATTTTTATAGATGCCttataa
attttcaagaaataataaattttttttttggagaaatATAAAGATTAATA
TAAACTATTGAGCCATTCCATTCCTTATCCATACAggttggacgaacatt
tccaggggataatccaaaaaaaattccagggggtattttttcacttttcc
aagggggtaagaaGTTATTCTAAGATTTCTAGtagataaaaaatgatttt
agctCGTCCACTCCCTTTTTAAGgtacgaaaataatttttgccaagggta
tttttacaaattatgccattttccaggggggtttCCACACATTtatttac
aataattttttctgacttgaaaaggttcgctCACCCCCTGTATGATCTTT
TAATGTAACAGCCCATTTAGGTTagatcaaaataaaagaattttcatttc
aaaaataaacacgCTGAATCGTAATAAGGTCCGGGGCGTTGAAAGGGTAT
TAGGTACCTAGAGTATTGTCGCCTAGCCCCCTTCCCTGGTAATTACTAAT
TGCTAATACAGCATTAGGTTTATTGGATTataattcaaaaaatactgATG
CTTAATGTACTAAATGGTACTTTAGCTTggctactttaatgggataaact
gtcacggggattaaattttgcggatttcgcggatttgggtgtcatccgcg
aaaatccgcgaaattaagtcctaGTGGAAATTTGGAacggcctcatccgc
gaaatatttctaaacaaaatatgtcaaataaatactatttcaatggttac
ttgcatcaaagaagcgcaaataatgcgtatttcaacaaccaacatgtatg
atttgacagtaaaagtcacaaaatcgtgaaaatattgccacccaatagtg
ccacccgcgaaatttaatccctgcgaaagtttatcccattaaagtatcat
ATACATGAGTCAAAGGGACCCCCCTCATATTATAAAATACTTTAACCTTT
ATGTACAGGGGTCTTGATGTCCACCCAAAgacaaaacaaagatttggtgC
ACAGAAAGACGAGGATTCTGTCGCATTAATGGATGTTATTTACCGTGATG
AGATCACACATGTGGCTTGTGGAATGAAGTGGTTTACATGGCTTTGTAAA
AATATGAATCCCTCATTGGTGAGTCAACCAGTTCTTCAATTATGATTACG
ATCCTATGAAAAAAGGGGCGTACGGGCGGGTCGATAACACCGAAAATTTg
gtgtgtttttttttggattgcCAGCGACACCGAGAACATTAACTACTAGG
ATTAATTTTTCGCAACGcattgcatttttaacaccttaACACCAAAATGA
AGTCATTATTTCTTCTTACATCGAGAAACCGACTGAAAAAAGGATAATTC
CGTCACATCGTTAAACCTGTACGCCCCCTGCCTGAAAGTTAGGGAATAGT
ATTATAGTATTGTACTATCGTATAAAATACATATTCTTTTTTATGCGGAG
TCTAGTTTTTGCATCAAAATTTTAGACTACAAACTAGAGCGTGTcggaaa
aaaaacgaaacaaaatttcagaaaagaaacaacttcaaatattttgagga
ttttaaCTTTTAAATGTATACAATTTGTTACGCTTTTTTCCGGATATGCG
gattatttttgattaaatcCCGATTAGTACTAATCGCGATTAGATTTCGA
TTAGTTAATCCCGGCAATTAACTTCCGTTGTTCGAACGTCAGATTAAGTA
ATCGTGGACATTTTGcctgtgttttcaaaaatcataatcTTGACGTCACT
TAATcttttttcgttcgaatttctcacttcaatgcagcgacttcacTTAT
TTTGTAGGAAAAAGCTTCAGAGCAggattaaaatttggctgatttTATCG
GGATTTTATCCAGatttaaagctaattttttGACGGTTCTGTGCTAAGCT
AATCTGCcgctaatccacttttgaaaaaccGGGCCCAGGGTAACACTCTG
AAATCAtcattttatctatttttaggAGCCTGTAGAGACATTCCATAAAT
tggtcaaaaaacattttaagtaaGTCAAGTACTTACGCTAATAAGCATAT
TTCGTGCCCTATTTGTTTTCTGGAAAATTGATTGGATCTCATCAGAACAA
CTATATTAAATTGTTAAGCCTTAatatttaaagcttttttcactcTTTCG
GCGTTAATCGTTAATTAGGAACCGGAGAGTACTTTTACTGCTAAAGCGTT
TTAACACTtctaaaagctttttttttacttaggACCTTAGAGAATGGGGA
ATTTCTCTAAGCTTCTTAGAGAATGGAGAATTTCTCTAAGCTCCCTTTGC
GTAGGCATAGTCCGTTTTTTTCCCTATTATTTCTAACTTGAACTAtgtta
ctaaagtctgtccagatataattggcagtggaaacaagaatgcctgtaac
ttttgatagtcaaatataattatggaatttttttttNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNtttacaccagtggtagttcaaccttagattaagaagttt
gttaaatttcaaggcgaacagaaaagttcttcggaagatatgggacccga
aataccccttggtagcacttttctgtgaaatatcaaatctccaaattttt
actaaaaacgggggttatgttatctatTTTGAACAgcgcaattaaaagtt
ggaaagtgtttaagtgttggtgcattggtattattggtatcattgattat
ttcgaaacgaagtgaaatcacagtataattgtttttactgaaaagataac
catgaacttatattgcctttgttatttttaaatcattaaagaattttgct
aattcccaaaacactaaacacagtttggctatgaggtcattaaagagatc
gtaaaatgtgttatgatcgaaaaactgtcatatcatatcactacccccgt
ttttagtaataagttggagattttatatttcacagaaaagtgctaccaag
gggtatttcgggtcccatatcttccgaagaaCTTTTCTgatcgccttgaa
atttaaataAATCAGATAAATCATAggaattaagaaaaaaattttcttta
caaaaaagtGAGGGGGCCATGCCCCCCCTGCCCCCCCCGGTGGTGTGGGC
CCTGAATAAgggtgatatcgtttgcttactcatcaattttaattcacaag
ctttttcacattggattgacatggatgtggagcaagattggttagaaaga
ggaaaagaaagcttaaatcagcataatataacaatagtgagacactgtcc
tgatatgaaatatgtgtctgatatgataATTTCAAATTCTGATTCCTTTT
TTTGCGTAGGCCATTTTGCAtgctttgaagaaaaagaaattcattgcggt
aatcatttttgtttttcattattCACTTTAGGGGATATTTGAAGCCACCA
TTCAATACAGAGGGCCGTTTGATTGCTGGTATGACTGATGAGGTATGTTA
CAGATCTTAAAAATTCTCTACACTTCTCACTAGCGACTTCGTTGAGTGAC
TTTACAAAGCTTTGCGTGTGGTGATACTCAAAGTCTTTGCGTGTGGTAAT
ACTCAAAGTCTTTGCGTGTGGTAATACTCAAAGTCTACGCGCTTACAatg
tacactcttttttttttgcttctaCAATCATGggcaaaatatttgagaca
aagggaatttccctgcgaaattttaaaatacCACAAATAGTTTTTAAGTG
CGTTAAACTAcagttagaaagtagagttttaacatgagacttaagacttg
ggagcttaggatctcaggattttaaagctcaaatttgctccaataaggat
tcgagtacacgtttttttttgttagaacacttaaaatttggctgagcctg
gatgtgcttatttttttagcaattttcagccttaaatgttcttaaatgcg
tttttaatttttcagactactctaaatcgacaatatcatgcaaaataaag
agaatataaaattggtacaatttggacaatatttgactctcgattttaga
aaatccatgcctaagttcggttaaactgcttgaaaagaagaaaaatggtt
ttttgtaatttttttccaaactgaggctgggcatgttcttacgatgttct
taatttttcgacgaatttcagcctaaatgttcttataaacatgggttcta
ataaaaaaaaaacgtgtatagacCGAACctctccaaaatcgaaatattca
atgaaagaaatgtCTGCGTATTTAGAATAATTTCCCATGAGAGTGCTACC
ACAAGGTAGCCAGAAGGAAAGCACTTGGACTTGGATatgattttaacttt
ttttgtaaatattgttcattgttttaatgatattcaagcatttttatttc
aaggtgtctaaaaaccttaaaactttgaaaattattgaaattatttttct
ttttagtggtATACTCCATTGGtcaaaaaatgaatattttacgtattttg
taaaattttaaagattttaactgaATGATGGTACGTAAAAGAAACATGTT
TATAAGTCAAATATTTCgttctctttttttcttgcgaacatttttttctc
aaaccctGCGAACATGTAATGTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032435XLOC_032435Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051172-exon-scaffold_2-1491911889:183594..183666TCONS_00051172-exon-scaffold_2-1491911889:183594..183666Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:183594..183666TCONS_00051172-exon-scaffold_2-1510915933:183594..183666Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:183594..183666TCONS_00051172-exon-scaffold_2-1575043694:183594..183666Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:184611..184757TCONS_00051172-exon-scaffold_2-1491911889:184611..184757Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:184611..184757TCONS_00051172-exon-scaffold_2-1510915933:184611..184757Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:184611..184757TCONS_00051172-exon-scaffold_2-1575043694:184611..184757Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:185312..185480TCONS_00051172-exon-scaffold_2-1491911889:185312..185480Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:185312..185480TCONS_00051172-exon-scaffold_2-1510915933:185312..185480Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:185312..185480TCONS_00051172-exon-scaffold_2-1575043694:185312..185480Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:187312..187381TCONS_00051172-exon-scaffold_2-1491911889:187312..187381Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:187312..187381TCONS_00051172-exon-scaffold_2-1510915933:187312..187381Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:187312..187381TCONS_00051172-exon-scaffold_2-1575043694:187312..187381Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:187654..187732TCONS_00051172-exon-scaffold_2-1491911889:187654..187732Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:187654..187732TCONS_00051172-exon-scaffold_2-1510915933:187654..187732Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:187654..187732TCONS_00051172-exon-scaffold_2-1575043694:187654..187732Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:202052..202211TCONS_00051172-exon-scaffold_2-1491911889:202052..202211Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:202052..202211TCONS_00051172-exon-scaffold_2-1510915933:202052..202211Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:202052..202211TCONS_00051172-exon-scaffold_2-1575043694:202052..202211Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:203069..203112TCONS_00051172-exon-scaffold_2-1491911889:203069..203112Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:203069..203112TCONS_00051172-exon-scaffold_2-1510915933:203069..203112Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:203069..203112TCONS_00051172-exon-scaffold_2-1575043694:203069..203112Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:204725..204785TCONS_00051172-exon-scaffold_2-1491911889:204725..204785Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:204725..204785TCONS_00051172-exon-scaffold_2-1510915933:204725..204785Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:204725..204785TCONS_00051172-exon-scaffold_2-1575043694:204725..204785Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1491911889:205750..205917TCONS_00051172-exon-scaffold_2-1491911889:205750..205917Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1510915933:205750..205917TCONS_00051172-exon-scaffold_2-1510915933:205750..205917Clytia hemisphaericaexon
TCONS_00051172-exon-scaffold_2-1575043694:205750..205917TCONS_00051172-exon-scaffold_2-1575043694:205750..205917Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:183594..205917 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	1.99084	0	0	0	1.85549	0	0.998854	0	0	0	0.664164	0	0.636385	5.78237e-07	0	0	0	0	0	0.0304479	0.477223	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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