TCONS_00051146 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051146
Unique NameTCONS_00051146
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1928

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051146 ID=TCONS_00051146|Name=TCONS_00051146|organism=Clytia hemisphaerica|type=transcript|length=1928bp
GCGCTGAGAAAAAAAAGACGATATATCAAAATGATGAATTATTTCAAGAG
AGCTAGaGGATATCGAATTACCACTGAAGCCATTCATTGTTGGAAAGAAT
GATACTGGCTTCTATAATAATGAGaCAATAATTGAAGACAGTTGGATGGC
AGTTCAATTTGAAAGACAGCAAAGACTGAGGGAATTTTGTGCTAAAAAGA
ATTTAGAAGATTTACCTCAACCAAAATTTGCACACAATTGGATATATAGC
AACAATGCGAGAGTTTCATACTGTTCTATTCCAAAAGTTGCATGTACAAc
atggaaaaaactttttcagGTATTCTATGGACGATATCAAAGAGTAGAAG
AAATTAAAATCAGTAAAGATGATATTCATGAGCTTAGGTATAAATAtcat
gaaaacatagattcatatACGGCTGACTTAAAAACTATGCAATACTTTAA
CTTTATAATTGTTCGACACCCATTGGAAAGACTGGTTTCAGGGTATCGGA
ATAAGATCGAAAAACCATTCACGCcgtattttcaaaagaaagatGGAAGC
CAAATGCTACGTTTGTCACGGAAAGGTATGACAGAGGCAGAATACCGAGC
AGGCAAAGGTGTTACGTTCCACGAATACATCAACTACATAATTAAAACAC
CAATGAATAAAATTGACGAACATTTTGGGGGCATGATAGGACTATGTCAC
ATTTGCAATGTAAAATATGATTTTATAGCAGACATGTCTACATTGTACAA
CGATTCGGatattattttgaagctaaTAGGATGGTACTATCGTCTTAGGT
TTCCGAGAAGTTCGAAAGACAGTTATAAAAAAGACGCAGTTGAGATTGCT
CCAGAATACATCAACAGACTATCAGATGACATCTTGAAGAAAGTCtatga
aaaattcaaagatgACTTTGAAGCTTTTGGCTACAAATTTGATATTAAAG
GAATCCGGAATGGTAATTTCTATTAAcaatttcaacaattttaaGAAATA
GAAGATTTGACCTCTTTGAATTTCATAATCTTATAAGTTATAGTCCTTTG
AAGTGATACCGGTATTTTAACGTCTCCAACACCCGTAGTCGGCGGCAAAT
GTGTTAAAAAACCCGTCTTTAGTTCGATCTTAAAGGCTTCTACGCACTCA
GTATTTTATGGTCGGGGAAAAAAGCGCACGGCTTAATTATTGCATACATT
ACATAAATCAAGCCTTCAAAGACTGTCGTTAAAGGATTATGGCACCTACA
CCTACACATCCAAGATTTTTAAAGCCTTGAGATGTTTTTACCCTTTTGAG
TTTCAatcctcaaaatgttcttaaccctttaagtactAATGACGAGTATA
CTAGACATGTAATGCCCAGTTTATGTTAGAAAtagtcatttttggtctaa
ctcgtaggaattggattgggtttcatggtcaagcaaaaaaaaaatcaaaa
gtgagtctttccagcgagattttaagccaaaaattcaaaaaaatgcaaaa
atttgacaaaagtccacttttttaagattttgaccgttttttgaccattt
tttgtcAACGAGTGattcaagaacctccaaaattggccctgcttgacttg
attctgtcctctagcgaattaatttgaagtttcactactgggcacctttc
tatcattcagcgCAGCAGGGTTAATATGTTCATAattatttcaccatttt
gtgagcattttatccatttttctcaaaaatcaggtgttttagattCCACA
TAGctttaagatgttcttaacttgttcttaatatttttgccttCGAAGCC
TTACGTCATTATGTAGTTTGGCCttgtaaaaaaaacgtgtaggtgcCATA
ATCCCTCTTAGCCTTTCCgaaaggttcgaattagaaTCAGTATCGTTTAG
TTGTTTTTACATACAGGAAAGTGTacat
Run BLAST on NCBI

transcript from alignment at scaffold_199:60078..68248-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051146 ID=TCONS_00051146|Name=TCONS_00051146|organism=Clytia hemisphaerica|type=transcript|length=8171bp|location=Sequence derived from alignment at scaffold_199:60078..68248- (Clytia hemisphaerica)
GCGCTGAGAAAAAAAAGACGATATATCAAAATGATGAATTATTTCAAGAG
AGCTAGGTAACCTTTCGTGTTTACTGTATTAGTTTTAATACATCCCTGTC
TCACAGCCCCAGTGGAACTTTTTTCCTCAGTGGGGATAACAATTTCGATT
GAAATCCCAATGGGGATATAATTCTATTGTTCCTAGGTTTAAAAAAAACA
GTAGAGATGCTTTTGGAGTGCAATTTTTAAACATTGAATTTCTAGTGGGA
TGAAATCAAAGTCAATTTCCTAATAGGGATGAAATTCCAGGGTATTTTCC
CATCCGGGACGAGATTTTGTCAAATTTTCCAGTGGGCCAGCGGGTCTATG
GCACAGAGGTGTTTTAGTACAACGTTCAATATAAATCATTTGGTTTTTAT
TCTCCTACACAAAGTTGTTTCAACATTCATCTAATGTTTACAACGTCGAT
ATAACGTTAGATGAACGTTTTAACAACCTTGTGTGCCAAGTGTGGAAAGT
ACTATTACATAGAAAGATTGGTTAAAATATCGTGTTTTTTCCCGCTGAAA
ATAATCAAATAAACAAACCCTCAAAATATTTTGGTATTTTCTATCCCTAC
TACTCGAAAACAACGGAATTCAAATTCCCAGTCATAACAAAAAACATGGA
TATATCAATCCACATTGAGTTTTAGTCCGTTATTTTTACCGATGTGAAAG
GGGTGTCCAAATTTAAGTTATATGTTAAACATTACCCTTTACCTCTCTAG
GAAACCTTTCGCGAATTTACTGAGTCCCAGACTTAAGGCTATAACCCCTA
TCATAGTCCGTATAAGAAACCCTGGTCTAGTGTTTTGTTTCAAGCCTTTT
GCTTCTTTCCATTGTTTCTTATTTGAACTTGCGTTGAGAAATTAGTTTGT
TTTGCTGACTTTTTGATCACGTGATTAACTTTTGAACTAATCCTAAAAGC
AGCAAATCGATTTTTATAATCGTTATTAACAAAGGAAAAATTAACAAAAA
GCTACAACAATAGGCTTCAAGACCCGGGTTTTTTTCATACGGAATATGCA
TACTCCTATACACCTTTTCGACCATAGCCGCCAATTGCCGCGCGGGCATT
TTTTGTTCGCTTTATCCCACTAAAACCGTCCCAGTCCTTTTTTCGGACCT
AAAGACAATAGAAAAAGGTGTCAAAAGAGGATTGGATCGAGTTTAAGGTA
TAATTAAAAAATAAAGTGACACGCGCCTGATCGCGCGACTACAGTCGAAA
AGGTGTATTGAAATTTTGGATTAAAAAGGAAATATTTGGAAATTTTCACA
TTTTTCAAAAAAATGTTGCGCGTTGGAAAGGTTAACATTTTTATCTTTTA
TTTTAGAGTGACTTACCGTGTTATCTTTGGATTCATTATCGCTTTGCTCT
TAGTAAAAGGTGACACAGATTTGTATTTTCACGCAAATTTCATGAAAGAA
TTTCGGTAAAATTACTCAATGAAAAATAAATTCCAGGGAAAATATAATCC
TCAAAAAAATGTTCTTATCTTCATTATTTTGTTAGTATTTTTTAGCAATT
TCTTAACCCTATTCATACTAGGCTTTTAGGGGTGGTTCAAAAACTAGGGG
GAGGGGCTGTTCCTGTATCACCCCTTAACTTTTGATCTAGTGGGTGTTTT
CGGATGAAATTTGGCACTCAAGATCCTTGTCATAAGGTAACTTTTTTGAC
AACATTTTTTTGATGACGTCATCATGCTCAAAGTGAGCAAAAATCGAAAA
TTTCGTTTGTTTTTATAAATAGTTCCTTCAGTCTAAAATGCTTATTATAT
CCTAATCATCCAATAAATTGCGGTTTAAACGATATATTTGATATAAAAAA
TAAATTTGTATTGAAAATGTCTCAATTTTTGTCACACCTTCCTGTCAGAA
ATGTCATCATGCTCAAGGTGTGAATTTTTTGTTTGTTTTGAAGCTAAATA
AAAGGTAGGAATTTACAGAAAATTTTATGACAAAAGCTTTATTAATTCAG
GAGCTATTAGCATAAGCTTTCACTCCCTAACAGAAACAACACCCCCCTAG
TAAGAATAGGGTTAAGAGATGTGAGTATTTAGAGTCCGCAAAGCCTTAAA
ATGCTCTTAACTTACTCTTAAGATTTTGGCAATCGAAGCCTTGTTTTCTT
ATATAGTTTGTTCCTATAGAAAAGTGACGTGTAATTATCAATTATAATGG
AGAAAAGTTTTTGAATATACATTCTGATAAATAACGAGATTGCTCACGGG
AATTTCTAACCCGCACGAGCAAACCCGCATCTGTCAATCATCTTTTAGAC
CTGTCAATCATTTTTTAGCAGCATTTTCTTTCAGTTTTGCTTTTCTTTTC
ACTTGTGGTTCTGAAAAAAGTGTTTGTAAGATAATAAAAAAAGACGAAAG
TCGATTTTTATGCATTTTTTTTAATTAAACGTTTTGGAATACTGGATTTT
CAAGAGAAGGGGAAGGCATGACTCTTGACTCTTGACTCTCCACACGCTAA
CCAACCTGATCCATTTTGAAATACTGTACTTGAGTCAAACTGCACTGAGG
TGACACTACTTAAAAAATTTTTGTTTCTTAAAATTATAACGGAAATCTAT
CAATAAGAGCTCATAAAACCAAAAAAAGTTTGGTCAGTGCTGACAAAATA
ACACTAACTTCATCGCACCGTATAGGATTCGAACTCTCAAAAACAACTTT
CCACCGCCTTATCCACTCGGCCGCTGTGAGATGTAGTAAAATGATTAACA
ATGATTAAGAATACCATATCTTTATTTGCTATGACCTATAAAATTTTATT
TACCATGTCAAGGTATTAACTTCTTAAACAAGTGATTTTAGATCGTTTCT
AACATGCGGAAGCAGATATCACTCGTCGAGATTTTCAGGACTCTTTAGTT
GAAGAGTGACTCTTCTTAACACTTATTCCAATTCTGTAAGGGGACTGTAG
CAAACGGGCTGTAAACCCTGCTAGACCCTGCTAGTGCCTATAAAATTAGA
AATTCCATCTCGGGGGTAAGGACACTCTCCAATCTCGTTAAAGTCTCAAA
AGACTGAAAAAGGACCTTTTTCTTGCATACAGTACCCATATACAGCAGAC
AGAATACACAGAGCGTACACACGCGGGCGATTAAACACGATCGCGAGAAA
TGCGGGTCAAAAAATTCCCGTGAGCAATCTCGTTATTTATCAAAAAGTTT
GAATATAGCACAATATGATGCTAAGTTTAATTTCATATTCTTTTTTTTTT
TCAGCTTTCAAAATCGGAATCGAATTATTACAACAAGGTTTTTTTAGCAA
AATTCATTAAATTTTCATCAGCGTTTTTTTTCATTTCTCACCCAGACGTC
TTATTCAAATTTTTTTTTTTTTTGAGGCTGCATAAAGGCAACTTTTTTGG
TTGAAATCAGTTCACGCTAAAATTAAAACGATTGCGCCAAGAATATTCTT
GATTACGCTACTAGCCAAAATATGGTCTTTACAAATTTTCTTTTTGATTT
CTGCTTTTTCCTAAAGGTACCTTTGTTCACAACGATTCTACAGATTAAAA
ATAATTTTATCAATCATTTGACTTTTTATTTTAATTTCAGAGGATATCGA
ATTACCACTGAAGCCATTCATTGTTGGTGAGTCAAAATACCAGTTTTCAT
AAATTATTTCGAGTGAAACGACTATGCCTTGCCTTGAAACCATTACCAAG
GTGATTAAATCCCTTGAGTCAAGTGTTACTCTTACTGTTCAAGGGGTCAA
CTAATGCTTGTCCAGGGGGTTGGACCTGCTGTCCGGGGGGGTCAAAGGTC
ACAATGTCCGGGGGGTAAATTTCCAAAATATGTTATATCCTCAACCCCCC
CCCAACGTTCAAACTTTTTCTGGAAGAGCCCAATAAAGTAAACTTCTTAG
GAACTCCTTCGGGAATCAATTACCAATATTTTGAAAACGAGGTAATAGTT
GCTTGTGGTACGTATAGTAATTTTTGAAAAAGGTCTATTCTTTTCACATC
CTGCACCATCAAATAAATCTTTCTCACCTTTTTTCCGTCTTTTTATATAT
AGTCAGTAGTAAGTGGATAACCTTTTGATATTTTGGGACAGGATGAGGCT
AAGTAAGTGACACCGCGACCATGGTTTGGCCCGAGGGGAAAAGGAATTTC
AAAAATTTAAGATCATGTATGAAGTAAAATCCTCATAATTTATGCAAAAT
CTTGTGACTTCTATATCTAATATTTCAATCTTTTAAATACCTATATTAAT
TTTGGGGATTGTACATCTATCGATTGAACGGAGAATTGTAATCTTATTCC
AATCATTCTAAGGGGGGGGGGGGGTTGTTGCTTGCGCCTCTTAGACGTTA
TATTCATGGCCCCCTCCGCCACTTTCAATTTCATGGCGTGGGCCTGAACT
TAGATTGATGAGTTTTGAGGATTTTATTTTATATAGGAACATCCGAGTTT
TTTTGTTGGACACACTGTCATATTAAATTTCTTTTTTCTTTTTCAATTAA
ATGAAATGTATAGGAAAGAATGATACTGACTTCTATAATAATGAGGTAAG
GTCTGGTCAATTCAATGAACGGATCTTGTATTAGACGATCTTGTCATGAT
CATCTACAAAAGGTTACTAAAAGGGAATAATTCAGGAGGCGAGAAGAATT
TGTGACTGGTGGTTAGCCCANAACTTTTTCTGGAAGAGCCCAATAAAGTA
AACTTCTTAGGAACTCCTTCGGGAATCAATTACCAATATTTTGAAAACGA
GGTAATAGTTGCTTGTGGTACGTATAGTAATTTTTGAAAAAGGTCTATTC
TTTTCACATCCTGCACCATCAAATAAATCTTTCTCACCTTTTTTCCGTCT
TTTTATATATAGTCAGTAGTAAGTGGATAACCTTTTGATATTTTGGGACA
GGATGAGGCTAAGTAAGTGACACCGCGACCATGGTTTGGCCCGAGGGGAA
AAGGAATTTCAAAAATTTAAGATCATGTATGAAGTAAAATCCTCATAATT
TATGCAAAATCTTGTGACTTCTATATCTAATATTTCAATCTTTTAAATAC
CTATATTAATTTTGGGGATTGTACATCTATCGATTGAACGGAGAATTGTA
ATCTTATTCCAATCATTCTAAGGGGGGGGGGGGGTTGTTGCTTGCGCCTC
TTAGACGTTATATTCATGGCCCCCTCCGCCACTTTCAATTTCATGGCGTG
GGCCTGAACTTAGATTGATGAGTTTTGAGGATTTTATTTTATATAGGAAC
ATCCGAGTTTTTTTGTTGGACACACTGTCATATTAAATTTCTTTTTTCTT
TTTCAATTCAATGAAATGTATAGGAAAGAATGATACTGGCTTCTATAATA
ATGAGGTAAGGTCTGGTCAATTCAATGAACGGATCTTGTATTAGACGATC
TTGTCATGATCATCTACAAAAGGTTACTAAAAGGGAATAATTCAGGAGGC
GAGAAGAATTTGTGACTGGTGGTTAGCCCAGGGCGGAGTAAGCAGTGGCG
GAGGTTTTTACAGTGTTTCTTCCAAACTATACCGCCACTATATTTTTTAT
AAACCGCCCTGACGCCGTGACTCTACTGCGTATATTTTTCCCGCGCTTAC
TATCCCTCTAACGGACCATAGCACCGTCTAACCTAGCGAGTCACGTTGTT
CAAGGATTTCTCACATGGTCAACCATCTATACAGTAGAGTCTTCTAGAAC
CTCTATAACTCGATTGTCTCCTTAACTCGAACAAGTTTTCTGGTCTTTTC
AGTTAGCAACGCCTGTAAACACCAATCGCAATAAAGAGTTATGGAGACTC
TATTGTATTTTGTTTATAAGAGTTAGTAAAGTGACAGTCAAGCAGTTCTT
ATTTTTCGAATACCATAAAGTACCGAAGTACTTTAGTGTGCCCCCCCCCC
CCCCCAAGAGTCTCCCCAAGTCCCTCATCGCGCCATTAATCGCACGCTAT
GTCACACCAATTGGATCCTAATTTTGGCCAAAATTCAAACTTTTTTGGTC
GTTAAATTTCCCGATACTCTCTTCGATAACCAAATTCTTGTGATATAAAC
TCTATCTTCTGAGACTAAACTATCAAACCAATTTCCCCCAAAAAATTCAA
TTATTTTTATAGACAATAATTGAAGACAGTTGGATGGCAGTTCAATTTGA
AAGACAGCAAAGACTGAGGGAATTTTGTGCTAAAAAGAATTTAGAAGATT
TACCTCAACCAAAATTTGCACACAATTGGATATATAGCAACAATGCGAGA
GTTTCATACTGTTCTATTCCAAAAGTTGCATGTACAACATGGAAAAAACT
TTTTCAGGTGAGCAAAGGCCAATTTTTATAGCTTTCTATTAGATAACCGA
TCTCGTACCCAGAGCCACTTGCACCACTTTTACTAATGGACGTCATACAA
TCTTTCTTGAGTGCTATCACACTCATAAAAAAGCGCACAAAGGGAACAGT
CTCTGTAATTCGAATCCTTCTCTAACTCGAAGAAAATTCTTGGTCTTCTT
GGTTCCTTGATTGGAGATCGAATTAGAGAAAGTCCATCGTAATTTAATCA
TTACTTTTTCAGGTATTCTATGGACGATATCAAAGAGTAGAAGAAATTAA
AATCAGTAAAGATGATATTCATGAGCTTAGGTATAAATATCATGAAAACA
TAGATTCATATACGGCTGACTTAAAAACTATGCAATACTTTAACTTTATA
ATTGTTCGACACCCATTGGAAAGACTGGTTTCAGGGTATCGGAATAAGAT
CGAAAAACCATTCACGCCGTATTTTCAAAAGAAAGATGGAAGCCAAATGC
TACGTTTGTCACGGAAAGGTATGACAGAGGCAGAATACCGAGCAGGCAAA
GGTGTTACGTTCCACGAATACATCAACTACATAATTAAAACACCAATGAA
TAAAATTGACGAACATTTTGGGGGCATGATAGGACTATGTCACATTTGCA
ATGTAAAATATGATTTTATAGCAGACATGTCTACATTGTACAACGATTCG
GATATTATTTTGAAGCTAATAGGATGGTACTATCGTCTTAGGTTTCCGAG
AAGTTCGAAAGACAGTTATAAAAAAGACGCAGTTGAGATTGCTCCAGAAT
ACATCAACAGACTATCAGATGACATCTTGAAGAAAGTCTATGAAAAATTC
AAAGATGACTTTGAAGCTTTTGGCTACAAATTTGATATTAAAGGAATCCG
GAATGGTAATTTCTATTAACAATTTCAACAATTTTAAGAAATAGAAGATT
TGACCTCTTTGAATTTCATAATCTTATAAGTTATAGTCCTTTGAAGTGAT
ACCGGTATTTTAACGTCTCCAACACCCGTAGTCGGCGGCAAATGTGTTAA
AAAACCCGTCTTTAGTTCGATCTTAAAGGCTTCTACGCACTCAGTATTTT
ATGGTCGGGGAAAAAAGCGCACGGCTTAATTATTGCATACATTACATAAA
TCAAGCCTTCAAAGACTGTCGTTAAAGGATTATGGCACCTACACCTACAC
ATCCAAGATTTTTAAAGCCTTGAGATGTTTTTACCCTTTTGAGTTTCAAT
CCTCAAAATGTTCTTAACCCTTTAAGTACTAATGACGAGTATACTAGACA
TGTAATGCCCAGTTTATGTTAGAAATAGTCATTTTTGGTCTAACTCGTAG
GAATTGGATTGGGTTTCATGGTCAAGCAAAAAAAAAATCAAAAGTGAGTC
TTTCCAGCGAGATTTTAAGCCAAAAATTCAAAAAAATGCAAAAATTTGAC
AAAAGTCCACTTTTTTAAGATTTTGACCGTTTTTTGACCATTTTTTGTCA
ACGAGTGATTCAAGAACCTCCAAAATTGGCCCTGCTTGACTTGATTCTGT
CCTCTAGCGAATTAATTTGAAGTTTCACTACTGGGCACCTTTCTATCATT
CAGCGCAGCAGGGTTAATATGTTCATAATTATTTCACCATTTTGTGAGCA
TTTTATCCATTTTTCTCAAAAATCAGGTGTTTTAGATTCCACATAGCTTT
AAGATGTTCTTAACTTGTTCTTAATATTTTTGCCTTCGAAGCCTTACGTC
ATTATGTAGTTTGGCCTTGTAAAAAAAACGTGTAGGTGCCATAATCCCTC
TTAGCCTTTCCGAAAGGTTCGAATTAGAATCAGTATCGTTTAGTTGTTTT
TACATACAGGAAAGTGTACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032421XLOC_032421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051146-exon-scaffold_199-1575043694:68193..68248TCONS_00051146-exon-scaffold_199-1575043694:68193..68248Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1575043694:64623..64658TCONS_00051146-exon-scaffold_199-1575043694:64623..64658Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1575043694:62894..62925TCONS_00051146-exon-scaffold_199-1575043694:62894..62925Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1575043694:61942..62136TCONS_00051146-exon-scaffold_199-1575043694:61942..62136Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1575043694:60078..61686TCONS_00051146-exon-scaffold_199-1575043694:60078..61686Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1510915933:68193..68248TCONS_00051146-exon-scaffold_199-1510915933:68193..68248Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1510915933:64623..64658TCONS_00051146-exon-scaffold_199-1510915933:64623..64658Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1510915933:62894..62925TCONS_00051146-exon-scaffold_199-1510915933:62894..62925Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1510915933:61942..62136TCONS_00051146-exon-scaffold_199-1510915933:61942..62136Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1510915933:60078..61686TCONS_00051146-exon-scaffold_199-1510915933:60078..61686Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1491911889:68193..68248TCONS_00051146-exon-scaffold_199-1491911889:68193..68248Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1491911889:64623..64658TCONS_00051146-exon-scaffold_199-1491911889:64623..64658Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1491911889:62894..62925TCONS_00051146-exon-scaffold_199-1491911889:62894..62925Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1491911889:61942..62136TCONS_00051146-exon-scaffold_199-1491911889:61942..62136Clytia hemisphaericaexon
TCONS_00051146-exon-scaffold_199-1491911889:60078..61686TCONS_00051146-exon-scaffold_199-1491911889:60078..61686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_199supercontigscaffold_199:60078..68248 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	2.54655e-05	0.0922541	0	0.520305	0.63477	0.864268	0.444404	0.918224	0.464598	0.965128	1.28596	0.556531	0.216033	1.42921	1.34096	0.89247	1.67911	0	0	0.719523	1.01485	0	0
Blast
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BLAST of TCONS_00051146 vs. Swiss-Prot (Human)
Match: CHSTB (Carbohydrate sulfotransferase 11 OS=Homo sapiens GN=CHST11 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.600e-35
Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 2 
Query:  269 YCSIPKVACTTWKKLFQVFYGRYQRVEEIKISKDDIH---ELRYKYHENIDSYTADLKTMQYFNFIIVRHPLERLVSGYRNKIEKPFTPYFQKKDGSQMLRLSRKGMTEAEYRAGKGVTFHEYINYIIKTPMNK---IDEHFGGMIGLCHICNVKYDFIADMSTLYNDSDIILKLIGWYYRLRFPRSSKDSYKKDAVEIAPEYINRLSDDILKKVYEKFKDDFEAFGY 934
            YC +PKVACT WK+L  V  GR +  + ++I  ++ H    L+     +I      LK+  Y  F+ VR P ERLVS YRNK  + +   F K+ G+++++  RK  T+   R G  V F E++ Y+I     +    +EH+  +  LCH C++ YD +    TL  DS+ +L+L G    L+FP  +K +   D  E+  E+   +S +   ++YE +K DF  F Y
Sbjct:  120 YCYVPKVACTNWKRLMMVLTGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKS--YMKFLFVREPFERLVSAYRNKFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEHWQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTYAKSTRTTD--EMTTEFFQNISSEHQTQLYEVYKLDFLMFNY 343
The following BLAST results are available for this feature:
BLAST of TCONS_00051146 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHSTB1.600e-3533.77Carbohydrate sulfotransferase 11 OS=Homo sapiens G... [more]
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