TCONS_00051060 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051060
Unique NameTCONS_00051060
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2087

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051060 ID=TCONS_00051060|Name=TCONS_00051060|organism=Clytia hemisphaerica|type=transcript|length=2087bp
AAAATATCTAAGCAAGTTAAATTTCACACCACTCgtattagcctatttca
taggatttgtACGTTCAGGAATTTAACCATAAAAAGTCGATTGCTGCAAT
AACTAATCCTTTGAAATAGCCTAATACGAGGGATAGTCGTTTAGAGCAAA
AGAAAAAGCATCAACACAGTTTCTGCAAAGATGGCAGTTTTCAGCCTGGT
GATTTGCACCATTTTAACTTTACTGACATCCCTGGTGAAAACACAAAGTA
CTGATATGTTCATATCAGTTAATACTGATACAAACATGCTAATTGATGTA
ATGGGTAGAGAGAGAATTTTTCACGGTACAAATGTTGTTGTTAAAGGAGA
ACCGTTTCATCCACACGGTGATGATGGACCAGACAGTTTTACTGAAGATG
ATATGAAGTTATTGCAAAGTCTTGGATTGAATACTGTTCGATTAGGAATG
ATGATGCCAGGTTATGTTCCGCAAAGAGGAGAATATAATGAAACCTACAT
TGAAACAGTTGGTACTATCGTCAAATTGGCTGCAAAATATGGTATCTACA
CCCTACTTGATATGCATCAAGATGTTTTTTCACCAAAACTTTGTGTTGAA
GGAATGCCAGATTGGATTGTTAATACAGGTGATGCGAAACCATTTCCATA
CCCATTATCTGAAGAACCATACAAAATCAACCCAGAAACTGGATATCCCT
ACCCTGAGGATTGTGCAAAATTACCATGGGGAAATTATTACTTCGCTGAA
GCAAGCGGACAGGCTTTTCAAAACTTATACAGCAACGTTGATGGTTTAAG
AGACGAATGGGCCAATTTCTGGAGAAAAACAGCAGAATATTTTAGGAAAC
ATCCGAGTGTAGTTGGCTATGAATTGATCAATGAACCTTTCTGTGGTGAC
ATCTATAAaaaccCTTTGTTATTGGTACCTGGCATCGCTGACAAATTGAA
CCTTGAACCTGCATATGATGTTTTACAAAAAGCTATTCGTCAAGTAGATG
ATCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGAAGTT
GGATTCTCAAAAGTACCAGGAGGCGCTGAATATCAAAACAGAAGTGTATT
GAGTTACCACTATTATGAGCCACCAGATTTCTCCAAAACCTTGAGTTTCG
CTGCACGTATGAACgatttaaaacgtttaaaatgtggaggATTTTTAACA
GAAATGCTTGTAGTAGATGAAGGCTTTGATGCAATGTATGAAATGTTCGA
TTTAGCTGATAAATACAAACAAAGCTGGCAAGGCTGGGACTACCATAGAC
CTCCAAATgctgaaaataaccaaaaatggAAAGGCACTGTTCCCAATCAT
ATTGTTGTTCAAAACACAAGTCGTACTTATCCTCAAGCAGTTGCTGGAAA
CattcaaaattatcatttcaacAAAGACACAAAAGAGTTTAGTTTGTCGT
ACAAAATTAACCCAGATTGTAAAAGCACCTTGACGGAGATTTACTTTAAT
AAGGAAATGCATTACCCAAATGGTTACCAATACTCTGTTTCGTCTAATGT
TCATTTCAGTGAACAAGACTATCGAATAATTCTGAGTCATATTCCAGCTT
ATTTCAGCCCTGGAGATTTAATTGAATTCTCTATCAGCCCGAAGtaatat
cattttttttcaaatttttaaacattttcatcttagaaatgggcttttcc
agaaaaaaaccgtgcaccacctgttgaggaggtctatttccattccaagg
gggttagtttgaaatgcagtggaatgcCATAGCAGTAGACAAAAttccgt
caaaaataagtggaattccatgggggtaatgattgaaaatctgtaaaaat
tcttaattccagaggggtatgatcctaaatttgcctggaattccaaagGG
GGTagttcacaaaaggttggagctcctcaacagggggtatacggtttttt
tctggaaaagcccaactactctttaatttttatcattcttaaatttttga
aaatgtaatgtaagtaaaatcaaaacatacaCCATTTTTTGTGTGCTTTT
TGAgtattttcctcagaaactgggtgttttagagttc
Run BLAST on NCBI

protein sequence of TCONS_00051060-protein

>TCONS_00051060-protein ID=TCONS_00051060-protein|Name=TCONS_00051060-protein|organism=Clytia hemisphaerica|type=polypeptide|length=488bp
MAVFSLVICTILTLLTSLVKTQSTDMFISVNTDTNMLIDVMGRERIFHGT
NVVVKGEPFHPHGDDGPDSFTEDDMKLLQSLGLNTVRLGMMMPGYVPQRG
EYNETYIETVGTIVKLAAKYGIYTLLDMHQDVFSPKLCVEGMPDWIVNTG
DAKPFPYPLSEEPYKINPETGYPYPEDCAKLPWGNYYFAEASGQAFQNLY
SNVDGLRDEWANFWRKTAEYFRKHPSVVGYELINEPFCGDIYKNPLLLVP
GIADKLNLEPAYDVLQKAIRQVDDQHAIFFEGVTWDFFEVGFSKVPGGAE
YQNRSVLSYHYYEPPDFSKTLSFAARMNDLKRLKCGGFLTEMLVVDEGFD
AMYEMFDLADKYKQSWQGWDYHRPPNAENNQKWKGTVPNHIVVQNTSRTY
PQAVAGNIQNYHFNKDTKEFSLSYKINPDCKSTLTEIYFNKEMHYPNGYQ
YSVSSNVHFSEQDYRIILSHIPAYFSPGDLIEFSISPK
Run BLAST on NCBI

transcript from alignment at scaffold_193:307608..312273+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051060 ID=TCONS_00051060|Name=TCONS_00051060|organism=Clytia hemisphaerica|type=transcript|length=4666bp|location=Sequence derived from alignment at scaffold_193:307608..312273+ (Clytia hemisphaerica)
AAAATATCTAAGCAAGTTAAATTTCACACCACTCgtattagcctatttca taggatttgtACGTTCAGGAATTTAACCATAAAAAGTCGATTGCTGCAAT AACTAATCCTTTGAAATAGCCTAATACGAGGGATAGTCGTTTAGAGCAAA AGAAAAAGCATCAACACAGTTTCTGCAAAGATGGCAGTTTTCAGCCTGGT GATTTGCACCATTTTAACTTTACTGACATCCCTGGTGAAAACACAAAGTA CTGATATGTTCATATCAGTTAATACTGATACAAACATGCTAATTGATGTA ATGGGTAGAGAGAGAATTTTTCACGGTACAAATGTTGTTGTTAAAGGAGA ACCGTTTCATCCACACGGTGATGATGGACCAGACAGTTTTACTGAAGATG ATATGAAGTTATTGCAAAGTCTTGGATTGAATACTGTTCGATTAGGTAAG TACTAAAATaactaagctctagtttagacggccgactttctaattgttag agtaggcagaaagagggcacaaagttggttGTTAAAACCTTTGCTTGGAA AGTTTGGAAAAAGACATTGCAtggacgtcaaaagagggctattcatcact ttagacagcccactttatgccctctttaattcacaataagaataggcagg gcaaaaagtgggccgtctaaaccagAGCTAACGTCAGTTCCTTGTGCAAA AAAACTTACACTGTGTCAATTACACATTAACAAAAAACTAAACTCAAACT TGAACCTAAACCTATAGTTCGTTCTTATTTTATGGTTTTGATAAATCAAA AAGAGGTGCAAGTAGCTTTGTGTACGATATTGACCCGGTAATTTTATCTA CTACTCAGAAAGACGCTAGAATCTACCTAGGCGATCCTATCGATCACAAT GTCACTGTTGTTATAATGCTGTTATTTATGAATAATTAGTCTTTTCATGA ATTTATTGACTACACTTACAAATGAGTGTTTAGACATGTAACACACAACG ATACTAATTCTTTCAGGAATGATGATGCCAGGTTATGTTCCGCAAAGAGG AGAATATAATGAAACCTACATTGAAACAGTTGGTACTATCGTCAAATTGG CTGCAAAATATGGTATCTACACCCTACTTGATATGCATCAAGATGTTTTT TCACCAAAACTTTGTGTTGAAGGAATGCCAGATTGGATTGTTAATACAGG TTTGTCTATTTTAAACCCCCCTGGTTAATTCGAGACCGGATAATTACCTC TAGTGAACTCCAAtccatatattttttctatGTTAATGTACTTTTGATAT ATTGATGATTTTGGAtgtaatgttcttataaaggtacagtctgGTCAAaa gttacacatttttttataagaacatgcaaattttttgaagccttcgggtg gtcttaacttttttagatttaagattttttagATATGTTCTTTTTTTCGC CATTCTGTGGGTAATGTTGTGCGTTTatctaagaaatcaggtgtattaga gtccccaaagccttaaaatgctcttaatttgttcttaacattttggccat cgaagcctcgtgatcttatatagtttgttcttataaaaaaacgtgtagat tgTGTTCTATTGTGCCACATGCTCTATATAAGAAATTATCACTATTAAAG GTACTCTGGATATATTGCTCTCAATCAAACATTCTAATAGTAGCAAAATG AAAAGGACAAAAGGCACTCTGAGGTGAACGTGACGAACAAATCTTTATTT TACTAACTTTTTGCACGTTTAAAGTTGATTCTAAAGTAAATTTTACCTAC TTGTAGCTTCTAATTTAATGAACAAAATACCACGGTTTTCTAACCAAATT TCGAACTAAAAATATATGGGTGGGCACTCACCTTGGAGGGATTTTCCGGG TGGGAATTTGCCAGAGGATTTTAAAATAGCCCTTATGATTTACGGCTAAT TTTTTAATTCCGTCGAACCCTTTCGTTTACATTATTTGCGTTGCTTGATG ATTTAGGTTCAAAAGTACAGAATTTGATAcgatttttgttgtattccgGA TTAGAAAACGACAATAATACTCAAACTGAATTGAGTAGTTTTCAATAACT TTACTGATTAGGAAAAATCTAGCTCTAACATTCATTAAGATGCCACTAAT TGGCACGGGGGGACTGACGacgggacgtgccgctggagtttgaaaatgGA CCCTGTAAATTTGGGATCCTGGCAgaaagaaaatcgaaaaaccttttttt atattttcaccctgaaaagtggcaaaaatgactaaaagaattTCCATGCA CCCTTAAAAAAAGGAACCCTGACCAGTGGCACGTCCTCGTACCCAATTGT TCCTAAATGCCCCTATCCCACTCCGGGCTATTGGCTCGGACATGGGTACA ACCATTGCTACTTTCTGATCTTAATTGCTATCTAAATTTTTGAGTGATGt cacttttcaaattttatttcaaagctTGTGTTAAGATGGTTGATATTCGG TCCTTTCAATTGTTAGAATGCGGGCTAAAAGCGGGAAGAAAGTTGGCAGT AAAAATCTCTGCCTAGAAGTTTTTGAGAGAAGTCACtacattgacgtcaa aagaggatGATGCATTAGCTATGGCAAACTTTCCACGTACCCTTTTATTA TTGGTCCCCAGAATGCAGGTTTGATGTAAATCGGTGATTCTAGCTTTGAG GAAAAGTGGAGAaaagttgtgtttttttttggaattgtcCTATCAATACT TGAAAAGAGAAACAATTCGTGGGTAGGGATATTCTTGGGACATTCCATGT CTTTGCGAATCACACTAACCTAAAATATTTGTTCTGTTGTTTGTTCTGTG TAATCATCAGGTGATGCGAAACCATTTCCATACCCATTATCTGAAGAACC ATACAAAATCAACCCAGAAACTGGATATCCCTACCCTGAGGATTGTGCAA AATTACCATGGGGAAATTATTACTTCGCTGAAGCAAGCGGACAGGCTTTT CAAAACTTATACAGCAACGTTGATGGTTTAAGAGACGAATGGGCCAATTT CTGGAGAAAAACAGCAGAATATTTTAGGAAACATCCGAGTGTAGTTGGCT ATGAATTGATCAATGAACCTTTCTGTGGTGACATCTATAAGTAAGTCAAA ACTATAAACAACCCCTCATTCCCTTACATCTCTGATTCTGATACCAGGGT CAATTTCATCAACTCCATCAGAACCTCTTTACGTCCTGGGAAAAGGGCAC AGTTCATTTTCGGTAAGAAGATTTCTTCCCTGGAATTTTTCATCACCACT AAACTGCATCTTAGCACTGGGAGCAACATCTATAAACCCCAATacaatct ttttaaatttgaaattacaaAAGAACCGGGAGATTCTTGATCACCTAAAA CCATTGCTGAATTAATGACACCGAGCTGTATCATTCGAAACCTTCAAGAT GCAGGGATCATACTTCTCGtcacatttttcttttcagaaaccCTTTGTTA TTGGTACCTGGCATCGCTGACAAATTGAACCTTGAACCTGCATATGATGT TTTACAAAAAGCTATTCGTCAAGTAGATGATCAACATGCAATCTTCTTTG AAGGAGTCACTTGGGATTTCTTTGAAGTTGGATTCTCAAAAGTACCAGGA GGCGCTGAATATCAAAACAGAAGTGTATTGAGTTACCACTATTATGAGCC ACCAGATTTCTCCAAAACCTTGAGTTTCGCTGCACGTATGAACgatttaa aacgtttaaaatgtggaggATTTTTAACAGAAATGCTTGTAGTAGATGAA GGCTTTGATGCAATGTATGAAATGTTCGATTTAGCTGATAAATACAAACA AAGCTGGCAAGGCTGGGACTACCATAGACCTCCAAATgctgaaaataacc aaaaatggAAAGGCACTGTTCCCAATCATATTGTTGTTCAAAACACAAGT CGTACTTATCCTCAAGCAGTTGCTGGAAACattcaaaattatcatttcaa cAAAGACACAAAAGAGTTTAGTTTGTCGTACAAAATTAACCCAGATTGTA AAAGCACCTTGACGGAGATTTACTTTAATAAGGAAATGCATTACCCAAAT GGTTACCAATACTCTGTTTCGTCTAATGTTCATTTCAGTGAACAAGACTA TCGAATAATTCTGAGTCATATTCCAGCTTATTTCAGCCCTGGAGATTTAA TTGAATTCTCTATCAGCCCGAAGtaatatcattttttttcaaatttttaa acattttcatcttagaaatgggcttttccagaaaaaaaccgtgcaccacc tgttgaggaggtctatttccattccaagggggttagtttgaaatgcagtg gaatgcCATAGCAGTAGACAAAAttccgtcaaaaataagtggaattccat gggggtaatgattgaaaatctgtaaaaattcttaattccagaggggtatg atcctaaatttgcctggaattccaaagGGGGTagttcacaaaaggttgga gctcctcaacagggggtatacggtttttttctggaaaagcccaactactc tttaatttttatcattcttaaatttttgaaaatgtaatgtaagtaaaatc aaaacatacaCCATTTTTTGTGTGCTTTTTGAgtattttcctcagaaact gggtgttttagagttc

Coding sequence (CDS) from alignment at scaffold_193:307608..312273+

>TCONS_00051060 ID=TCONS_00051060|Name=TCONS_00051060|organism=Clytia hemisphaerica|type=CDS|length=5868bp|location=Sequence derived from alignment at scaffold_193:307608..312273+ (Clytia hemisphaerica)
ATGGCAGTTTTCAGCCTGGTGATTTGCACCATTTTAACTTTACTGACATC
CCTGGTGAAAACACAAAGTACTGATATGTTCATATCAGTTAATACTGATA
CAAACATGCTAATTGATGTAATGGGTAGAGAGAGAATTTTTCACGGTACA
AATGTTGTTGTTAAAGGAGAACCGTTTCATCCACACGGTGATGATGGACC
AGACAGTTTTACTGAAGATGATATGAAGTTATTGCAAAGTCTTGGATTGA
ATACTGTTCGATTAGGAATGATGATGCCAGGTTATGTTCCGCAAAGAGGA
GAATATAATGAAACCTACATTGAAACAGTTGGTACTATCGTCAAATTGGC
TGCAAAATATGGTATCTACACCCTACTTGATATGCATCAAGATGTTTTTT
CACCAAAACTTTGTGTTGAAGGAATGCCAGATTGGATTGTTAATACAGGT
GATGCGAAACCATTTCCATACCCATTATCTGAAGAACCATACAAAATCAA
CCCAGAAACTGGATATCCCTACCCTGAGGATTGTGCAAAATTACCATGGG
GAAATTATTACTTCGCTGAAGCAAGCGGACAGGCTTTTCAAAACTTATAC
AGCAACGTTGATGGTTTAAGAGACGAATGGGCCAATTTCTGGAGAAAAAC
AGCAGAATATTTTAGGAAACATCCGAGTGTAGTTGGCTATGAATTGATCA
ATGAACCTTTCTGTGGTGACATCTATAAaaaccCTTTGTTATTGGTACCT
GGCATCGCTGACAAATTGAACCTTGAACCTGCATATGATGTTTTACAAAA
AGCTATTCGTCAAGTAGATGATCAACATGCAATCTTCTTTGAAGGAGTCA
CTTGGGATTTCTTTGAAGTTGGATTCTCAAAAGTACCAGGAGGCGCTGAA
TATCAAAACAGAAGTGTATTGAGTTACCACTATTATGAGCCACCAGATTT
CTCCAAAACCTTGAGTTTCGCTGCACGTATGAACgatttaaaacgtttaa
aatgtggaggATTTTTAACAGAAATGCTTGTAGTAGATGAAGGCTTTGAT
GCAATGTATGAAATGTTCGATTTAGCTGATAAATACAAACAAAGCTGGCA
AGGCTGGGACTACCATAGACCTCCAAATgctgaaaataaccaaaaatggA
AAGGCACTGTTCCCAATCATATTGTTGTTCAAAACACAAGTCGTACTTAT
CCTCAAGCAGTTGCTGGAAACattcaaaattatcatttcaacAAAGACAC
AAAAGAGTTTAGTTTGTCGTACAAAATTAACCCAGATTGTAAAAGCACCT
TGACGGAGATTTACTTTAATAAGGAAATGCATTACCCAAATGGTTACCAA
TACTCTGTTTCGTCTAATGTTCATTTCAGTGAACAAGACTATCGAATAAT
TCTGAGTCATATTCCAGCTTATTTCAGCCCTGGAGATTTAATTGAATTCT
CTATCAGCCCGAAGtaaATGGCAGTTTTCAGCCTGGTGATTTGCACCATT
TTAACTTTACTGACATCCCTGGTGAAAACACAAAGTACTGATATGTTCAT
ATCAGTTAATACTGATACAAACATGCTAATTGATGTAATGGGTAGAGAGA
GAATTTTTCACGGTACAAATGTTGTTGTTAAAGGAGAACCGTTTCATCCA
CACGGTGATGATGGACCAGACAGTTTTACTGAAGATGATATGAAGTTATT
GCAAAGTCTTGGATTGAATACTGTTCGATTAGGAATGATGATGCCAGGTT
ATGTTCCGCAAAGAGGAGAATATAATGAAACCTACATTGAAACAGTTGGT
ACTATCGTCAAATTGGCTGCAAAATATGGTATCTACACCCTACTTGATAT
GCATCAAGATGTTTTTTCACCAAAACTTTGTGTTGAAGGAATGCCAGATT
GGATTGTTAATACAGGTGATGCGAAACCATTTCCATACCCATTATCTGAA
GAACCATACAAAATCAACCCAGAAACTGGATATCCCTACCCTGAGGATTG
TGCAAAATTACCATGGGGAAATTATTACTTCGCTGAAGCAAGCGGACAGG
CTTTTCAAAACTTATACAGCAACGTTGATGGTTTAAGAGACGAATGGGCC
AATTTCTGGAGAAAAACAGCAGAATATTTTAGGAAACATCCGAGTGTAGT
TGGCTATGAATTGATCAATGAACCTTTCTGTGGTGACATCTATAAaaacc
CTTTGTTATTGGTACCTGGCATCGCTGACAAATTGAACCTTGAACCTGCA
TATGATGTTTTACAAAAAGCTATTCGTCAAGTAGATGATCAACATGCAAT
CTTCTTTGAAGGAGTCACTTGGGATTTCTTTGAAGTTGGATTCTCAAAAG
TACCAGGAGGCGCTGAATATCAAAACAGAAGTGTATTGAGTTACCACTAT
TATGAGCCACCAGATTTCTCCAAAACCTTGAGTTTCGCTGCACGTATGAA
CgatttaaaacgtttaaaatgtggaggATTTTTAACAGAAATGCTTGTAG
TAGATGAAGGCTTTGATGCAATGTATGAAATGTTCGATTTAGCTGATAAA
TACAAACAAAGCTGGCAAGGCTGGGACTACCATAGACCTCCAAATgctga
aaataaccaaaaatggAAAGGCACTGTTCCCAATCATATTGTTGTTCAAA
ACACAAGTCGTACTTATCCTCAAGCAGTTGCTGGAAACattcaaaattat
catttcaacAAAGACACAAAAGAGTTTAGTTTGTCGTACAAAATTAACCC
AGATTGTAAAAGCACCTTGACGGAGATTTACTTTAATAAGGAAATGCATT
ACCCAAATGGTTACCAATACTCTGTTTCGTCTAATGTTCATTTCAGTGAA
CAAGACTATCGAATAATTCTGAGTCATATTCCAGCTTATTTCAGCCCTGG
AGATTTAATTGAATTCTCTATCAGCCCGAAGtaaATGGCAGTTTTCAGCC
TGGTGATTTGCACCATTTTAACTTTACTGACATCCCTGGTGAAAACACAA
AGTACTGATATGTTCATATCAGTTAATACTGATACAAACATGCTAATTGA
TGTAATGGGTAGAGAGAGAATTTTTCACGGTACAAATGTTGTTGTTAAAG
GAGAACCGTTTCATCCACACGGTGATGATGGACCAGACAGTTTTACTGAA
GATGATATGAAGTTATTGCAAAGTCTTGGATTGAATACTGTTCGATTAGG
AATGATGATGCCAGGTTATGTTCCGCAAAGAGGAGAATATAATGAAACCT
ACATTGAAACAGTTGGTACTATCGTCAAATTGGCTGCAAAATATGGTATC
TACACCCTACTTGATATGCATCAAGATGTTTTTTCACCAAAACTTTGTGT
TGAAGGAATGCCAGATTGGATTGTTAATACAGGTGATGCGAAACCATTTC
CATACCCATTATCTGAAGAACCATACAAAATCAACCCAGAAACTGGATAT
CCCTACCCTGAGGATTGTGCAAAATTACCATGGGGAAATTATTACTTCGC
TGAAGCAAGCGGACAGGCTTTTCAAAACTTATACAGCAACGTTGATGGTT
TAAGAGACGAATGGGCCAATTTCTGGAGAAAAACAGCAGAATATTTTAGG
AAACATCCGAGTGTAGTTGGCTATGAATTGATCAATGAACCTTTCTGTGG
TGACATCTATAAaaaccCTTTGTTATTGGTACCTGGCATCGCTGACAAAT
TGAACCTTGAACCTGCATATGATGTTTTACAAAAAGCTATTCGTCAAGTA
GATGATCAACATGCAATCTTCTTTGAAGGAGTCACTTGGGATTTCTTTGA
AGTTGGATTCTCAAAAGTACCAGGAGGCGCTGAATATCAAAACAGAAGTG
TATTGAGTTACCACTATTATGAGCCACCAGATTTCTCCAAAACCTTGAGT
TTCGCTGCACGTATGAACgatttaaaacgtttaaaatgtggaggATTTTT
AACAGAAATGCTTGTAGTAGATGAAGGCTTTGATGCAATGTATGAAATGT
TCGATTTAGCTGATAAATACAAACAAAGCTGGCAAGGCTGGGACTACCAT
AGACCTCCAAATgctgaaaataaccaaaaatggAAAGGCACTGTTCCCAA
TCATATTGTTGTTCAAAACACAAGTCGTACTTATCCTCAAGCAGTTGCTG
GAAACattcaaaattatcatttcaacAAAGACACAAAAGAGTTTAGTTTG
TCGTACAAAATTAACCCAGATTGTAAAAGCACCTTGACGGAGATTTACTT
TAATAAGGAAATGCATTACCCAAATGGTTACCAATACTCTGTTTCGTCTA
ATGTTCATTTCAGTGAACAAGACTATCGAATAATTCTGAGTCATATTCCA
GCTTATTTCAGCCCTGGAGATTTAATTGAATTCTCTATCAGCCCGAAGta
aATGGCAGTTTTCAGCCTGGTGATTTGCACCATTTTAACTTTACTGACAT
CCCTGGTGAAAACACAAAGTACTGATATGTTCATATCAGTTAATACTGAT
ACAAACATGCTAATTGATGTAATGGGTAGAGAGAGAATTTTTCACGGTAC
AAATGTTGTTGTTAAAGGAGAACCGTTTCATCCACACGGTGATGATGGAC
CAGACAGTTTTACTGAAGATGATATGAAGTTATTGCAAAGTCTTGGATTG
AATACTGTTCGATTAGGAATGATGATGCCAGGTTATGTTCCGCAAAGAGG
AGAATATAATGAAACCTACATTGAAACAGTTGGTACTATCGTCAAATTGG
CTGCAAAATATGGTATCTACACCCTACTTGATATGCATCAAGATGTTTTT
TCACCAAAACTTTGTGTTGAAGGAATGCCAGATTGGATTGTTAATACAGG
TGATGCGAAACCATTTCCATACCCATTATCTGAAGAACCATACAAAATCA
ACCCAGAAACTGGATATCCCTACCCTGAGGATTGTGCAAAATTACCATGG
GGAAATTATTACTTCGCTGAAGCAAGCGGACAGGCTTTTCAAAACTTATA
CAGCAACGTTGATGGTTTAAGAGACGAATGGGCCAATTTCTGGAGAAAAA
CAGCAGAATATTTTAGGAAACATCCGAGTGTAGTTGGCTATGAATTGATC
AATGAACCTTTCTGTGGTGACATCTATAAaaaccCTTTGTTATTGGTACC
TGGCATCGCTGACAAATTGAACCTTGAACCTGCATATGATGTTTTACAAA
AAGCTATTCGTCAAGTAGATGATCAACATGCAATCTTCTTTGAAGGAGTC
ACTTGGGATTTCTTTGAAGTTGGATTCTCAAAAGTACCAGGAGGCGCTGA
ATATCAAAACAGAAGTGTATTGAGTTACCACTATTATGAGCCACCAGATT
TCTCCAAAACCTTGAGTTTCGCTGCACGTATGAACgatttaaaacgttta
aaatgtggaggATTTTTAACAGAAATGCTTGTAGTAGATGAAGGCTTTGA
TGCAATGTATGAAATGTTCGATTTAGCTGATAAATACAAACAAAGCTGGC
AAGGCTGGGACTACCATAGACCTCCAAATgctgaaaataaccaaaaatgg
AAAGGCACTGTTCCCAATCATATTGTTGTTCAAAACACAAGTCGTACTTA
TCCTCAAGCAGTTGCTGGAAACattcaaaattatcatttcaacAAAGACA
CAAAAGAGTTTAGTTTGTCGTACAAAATTAACCCAGATTGTAAAAGCACC
TTGACGGAGATTTACTTTAATAAGGAAATGCATTACCCAAATGGTTACCA
ATACTCTGTTTCGTCTAATGTTCATTTCAGTGAACAAGACTATCGAATAA
TTCTGAGTCATATTCCAGCTTATTTCAGCCCTGGAGATTTAATTGAATTC
TCTATCAGCCCGAAGtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032364XLOC_032364Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051060-exon-scaffold_193-1491911889:307608..308052TCONS_00051060-exon-scaffold_193-1491911889:307608..308052Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1510915933:307608..308052TCONS_00051060-exon-scaffold_193-1510915933:307608..308052Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1575043694:307608..308052TCONS_00051060-exon-scaffold_193-1575043694:307608..308052Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1491911889:308624..308806TCONS_00051060-exon-scaffold_193-1491911889:308624..308806Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1510915933:308624..308806TCONS_00051060-exon-scaffold_193-1510915933:308624..308806Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1575043694:308624..308806TCONS_00051060-exon-scaffold_193-1575043694:308624..308806Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1491911889:310468..310747TCONS_00051060-exon-scaffold_193-1491911889:310468..310747Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1510915933:310468..310747TCONS_00051060-exon-scaffold_193-1510915933:310468..310747Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1575043694:310468..310747TCONS_00051060-exon-scaffold_193-1575043694:310468..310747Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1491911889:311095..312273TCONS_00051060-exon-scaffold_193-1491911889:311095..312273Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1510915933:311095..312273TCONS_00051060-exon-scaffold_193-1510915933:311095..312273Clytia hemisphaericaexon
TCONS_00051060-exon-scaffold_193-1575043694:311095..312273TCONS_00051060-exon-scaffold_193-1575043694:311095..312273Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051060-proteinTCONS_00051060-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_193supercontigscaffold_193:307608..312273 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.976086 0.942717 0.305499 0.350106 0 0.021526 0.9486 1.13179 2.87151 2.38489 3.63761 4.01644 17.2574 19.5766 10.9316 10.4793 5.25799 5.26373 13.3013 13.591 3.4761 4.38835 3.50981 4.22719 0.399585 0.168883 1.6653 3.0256 12.2 9.57776
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001547Glyco_hydro_5
IPR018087Glyco_hydro_5_CS
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051060 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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