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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051004 ID=TCONS_00051004|Name=TCONS_00051004|organism=Clytia hemisphaerica|type=transcript|length=769bp
GGGGCAAAGCTTTACATGAAAACTGGCGTAAAAAGTAAAACAAGGATTAT
CAGTCTGGATGCTATCAAGGACTCTTTGAAGACGAGATATTCTATCAAAG
ATGTTGATCAAGCTTCAAGAGCCCTTCTTGGTCTACATGGCTTTACAGGG
TGTGACACGATCAGTTCCTTTGCTGGGAAAGGTAAAGTCAAACCGCTCCA
AACAATGATGAAAGATGAACAACATATCAGCCTTTTTGCTTCTTTTGGAG
ATGCACCGGATTTAACAGAGACACAGTTTAttcaaatccaaaaatttgTT
TGTGACATGTATGGGCATAAAGACATCAACACAAACAACGTACGTTACAA
AATGTATGCAGCCAAACATGGCCATCTCGACCCCAAAACCATCCCGCCAT
GTGCCGACAGCCTGCGACAACACAGCCTACGTGCCTCATATCAGGTTCAC
ATATGGAGAAAGTCGTTGCAAAGCCATCCTATCATTCCGTCGCCTGTTAA
CTTTGGTTGGGGTGAGAATGAGGAAGGCGATCTGATTGTTTCATGGAATA
ACGTAAATCCTGCTCCAGATGAAGTCCTGGAAATGATTTTCTGTACGTGT
TTGAAGAAGTGTCTCCCTGGATCGTGCCCTTGTGTTGATAATTCCCTGAA
ATGTACAGATGCTTGCATGAACCACGAATGCAAAAACTTTCAATCTAATG
AGGAACCAGCAGAAGAATACACAGAAGCGtatgaagatgatgatgataat
cGTGAAGATGAAATTGAGG Run BLAST on NCBI protein sequence of TCONS_00051004-protein >TCONS_00051004-protein ID=TCONS_00051004-protein|Name=TCONS_00051004-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
GAKLYMKTGVKSKTRIISLDAIKDSLKTRYSIKDVDQASRALLGLHGFTG
CDTISSFAGKGKVKPLQTMMKDEQHISLFASFGDAPDLTETQFIQIQKFV
CDMYGHKDINTNNVRYKMYAAKHGHLDPKTIPPCADSLRQHSLRASYQVH
IWRKSLQSHPIIPSPVNFGWGENEEGDLIVSWNNVNPAPDEVLEMIFCTC
LKKCLPGSCPCVDNSLKCTDACMNHECKNFQSNEEPAEEYTEAYEDDDDN
REDEIE Run BLAST on NCBI transcript from alignment at scaffold_191:85678..86446 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051004 ID=TCONS_00051004|Name=TCONS_00051004|organism=Clytia hemisphaerica|type=transcript|length=769bp|location=Sequence derived from alignment at scaffold_191:85678..86446 (Clytia hemisphaerica)
CCTCAATTTCATCTTCACgattatcatcatcatcttcataCGCTTCTGTG
TATTCTTCTGCTGGTTCCTCATTAGATTGAAAGTTTTTGCATTCGTGGTT
CATGCAAGCATCTGTACATTTCAGGGAATTATCAACACAAGGGCACGATC
CAGGGAGACACTTCTTCAAACACGTACAGAAAATCATTTCCAGGACTTCA
TCTGGAGCAGGATTTACGTTATTCCATGAAACAATCAGATCGCCTTCCTC
ATTCTCACCCCAACCAAAGTTAACAGGCGACGGAATGATAGGATGGCTTT
GCAACGACTTTCTCCATATGTGAACCTGATATGAGGCACGTAGGCTGTGT
TGTCGCAGGCTGTCGGCACATGGCGGGATGGTTTTGGGGTCGAGATGGCC
ATGTTTGGCTGCATACATTTTGTAACGTACGTTGTTTGTGTTGATGTCTT
TATGCCCATACATGTCACAAAcaaatttttggatttgaaTAAACTGTGTC
TCTGTTAAATCCGGTGCATCTCCAAAAGAAGCAAAAAGGCTGATATGTTG
TTCATCTTTCATCATTGTTTGGAGCGGTTTGACTTTACCTTTCCCAGCAA
AGGAACTGATCGTGTCACACCCTGTAAAGCCATGTAGACCAAGAAGGGCT
CTTGAAGCTTGATCAACATCTTTGATAGAATATCTCGTCTTCAAAGAGTC
CTTGATAGCATCCAGACTGATAATCCTTGTTTTACTTTTTACGCCAGTTT
TCATGTAAAGCTTTGCCCC Coding sequence (CDS) from alignment at scaffold_191:85678..86446 >TCONS_00051004 ID=TCONS_00051004|Name=TCONS_00051004|organism=Clytia hemisphaerica|type=CDS|length=768bp|location=Sequence derived from alignment at scaffold_191:85678..86446 (Clytia hemisphaerica)
CTCAATTTCATCTTCACgattatcatcatcatcttcataCGCTTCTGTGT
ATTCTTCTGCTGGTTCCTCATTAGATTGAAAGTTTTTGCATTCGTGGTTC
ATGCAAGCATCTGTACATTTCAGGGAATTATCAACACAAGGGCACGATCC
AGGGAGACACTTCTTCAAACACGTACAGAAAATCATTTCCAGGACTTCAT
CTGGAGCAGGATTTACGTTATTCCATGAAACAATCAGATCGCCTTCCTCA
TTCTCACCCCAACCAAAGTTAACAGGCGACGGAATGATAGGATGGCTTTG
CAACGACTTTCTCCATATGTGAACCTGATATGAGGCACGTAGGCTGTGTT
GTCGCAGGCTGTCGGCACATGGCGGGATGGTTTTGGGGTCGAGATGGCCA
TGTTTGGCTGCATACATTTTGTAACGTACGTTGTTTGTGTTGATGTCTTT
ATGCCCATACATGTCACAAAcaaatttttggatttgaaTAAACTGTGTCT
CTGTTAAATCCGGTGCATCTCCAAAAGAAGCAAAAAGGCTGATATGTTGT
TCATCTTTCATCATTGTTTGGAGCGGTTTGACTTTACCTTTCCCAGCAAA
GGAACTGATCGTGTCACACCCTGTAAAGCCATGTAGACCAAGAAGGGCTC
TTGAAGCTTGATCAACATCTTTGATAGAATATCTCGTCTTCAAAGAGTCC
TTGATAGCATCCAGACTGATAATCCTTGTTTTACTTTTTACGCCAGTTTT
CATGTAAAGCTTTGCCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051004-exon-scaffold_191-1491911889:85678..86446 | TCONS_00051004-exon-scaffold_191-1491911889:85678..86446 | Clytia hemisphaerica | exon |
| TCONS_00051004-exon-scaffold_191-1510915933:85678..86446 | TCONS_00051004-exon-scaffold_191-1510915933:85678..86446 | Clytia hemisphaerica | exon |
| TCONS_00051004-exon-scaffold_191-1575043694:85678..86446 | TCONS_00051004-exon-scaffold_191-1575043694:85678..86446 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_191 | supercontig | scaffold_191:85678..86446 . |
Blast
The following BLAST results are available for this feature:
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