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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051001 ID=TCONS_00051001|Name=TCONS_00051001|organism=Clytia hemisphaerica|type=transcript|length=1109bp
ggctttaaaatcaatgaagCCTCAAAAGTGACCTACATTAAAAGTTTGAA
TAGTGGTCAATTGATATTTTGATgaataatataatttcaaaaaagtgaga
GTTTACTACAAAATGATTACTTTATACATGCTACCCTATCAATAAAGTCA
actcttgtttttaatttgaagaaaatattttaaaatatctttttttttac
agaaattcAATAGGCGACCAtctatttgcaaaattttaacgCCACTATTA
TGCTGGAATAATTGAAAATACACACGTTCACGTATCCTACTGAACACTAT
CACGTTTCACGATTATATCgacgaatattttttcaaaagcttattCGTTA
TTGGACTATTATGATGCTGCAATGGATTTTTGGTTTAGTATACCTACCCT
GTATCTAATTCAATGTCTTGTTAATGGAATTATTGCTGTTGGAATGACGT
TGGTATTGGACAATAATTAAAGACTTTACATCAACTAGAGAGTATTACAT
ATTTTAAATGTATTGCAAAGAAGTAATTAATATTGTACAATAGTAATATT
GTTAATATTTATAGATGATTATCTAAAACAacattgttaaaaatttatgt
taaaaatgaaattttttcaaaccttgttacacatttttttataagcaact
ccatcATCCCAGCAACTTGGGTCAGGCCTGGAGTTGCTAAGGGTTTTTCG
AAATCCAGGCTCAAAGTTGCTTGTAGGgttgcttaaaaattttcaagcac
atttttgcatttttcctgatttttcgaagattttcaaggctttttttcta
agttgtgtcaaaattattttttattgctgagGAGAAAAGTTGCTAATTTG
GATTTGAGGCCTCAGGGTTGCTAAGCAAGGTCCTTATTTTTTGGGCCATa
ttgaggcctgagcccttagtaactcggttgcttataaaataaatgtGTAA
TCGACCCTAACAAAATGTTGACGATTTgtgcacccattttgcctaagccA
CCTCCAAGAGTAGTTTATCGTTATCTTGTGATCACATCGTTTTTGCTACT
CTCTCTAGATCTATCTTATCCTTtagggctgaccttccagcgcagctggt
ttatttgaa Run BLAST on NCBI transcript from alignment at scaffold_191:18515..19623 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051001 ID=TCONS_00051001|Name=TCONS_00051001|organism=Clytia hemisphaerica|type=transcript|length=1109bp|location=Sequence derived from alignment at scaffold_191:18515..19623 (Clytia hemisphaerica)
ttcaaataaaccagctgcgctggaaggtcagccctaAAGGATAAGATAGA
TCTAGAGAGAGTAGCAAAAACGATGTGATCACAAGATAACGATAAACTAC
TCTTGGAGGTggcttaggcaaaatgggtgcacAAATCGTCAACATTTTGT
TAGGGTCGATTACacatttattttataagcaaccgagttactaagggctc
aggcctcaatATGGCCCAAAAAATAAGGACCTTGCTTAGCAACCCTGAGG
CCTCAAATCCAAATTAGCAACTTTTCTCctcagcaataaaaaataatttt
gacacaacttagaaaaaaagccttgaaaatcttcgaaaaatcaggaaaaa
tgcaaaaatgtgcttgaaaatttttaagcaacCCTACAAGCAACTTTGAG
CCTGGATTTCGAAAAACCCTTAGCAACTCCAGGCCTGACCCAAGTTGCTG
GGATgatggagttgcttataaaaaaatgtgtaacaaggtttgaaaaaatt
tcatttttaacataaatttttaacaatgtTGTTTTAGATAATCATCTATA
AATATTAACAATATTACTATTGTACAATATTAATTACTTCTTTGCAATAC
ATTTAAAATATGTAATACTCTCTAGTTGATGTAAAGTCTTTAATTATTGT
CCAATACCAACGTCATTCCAACAGCAATAATTCCATTAACAAGACATTGA
ATTAGATACAGGGTAGGTATACTAAACCAAAAATCCATTGCAGCATCATA
ATAGTCCAATAACGaataagcttttgaaaaaatattcgtcGATATAATCG
TGAAACGTGATAGTGTTCAGTAGGATACGTGAACGTGTGTATTTTCAATT
ATTCCAGCATAATAGTGGcgttaaaattttgcaaatagaTGGTCGCCTAT
Tgaatttctgtaaaaaaaaagatattttaaaatattttcttcaaattaaa
aacaagagtTGACTTTATTGATAGGGTAGCATGTATAAAGTAATCATTTT
GTAGTAAACtctcacttttttgaaattatattattcATCAAAATATCAAT
TGACCACTATTCAAACTTTTAATGTAGGTCACTTTTGAGGcttcattgat
tttaaagcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051001-exon-scaffold_191-1491911889:18515..19623 | TCONS_00051001-exon-scaffold_191-1491911889:18515..19623 | Clytia hemisphaerica | exon |
| TCONS_00051001-exon-scaffold_191-1510915933:18515..19623 | TCONS_00051001-exon-scaffold_191-1510915933:18515..19623 | Clytia hemisphaerica | exon |
| TCONS_00051001-exon-scaffold_191-1575043694:18515..19623 | TCONS_00051001-exon-scaffold_191-1575043694:18515..19623 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_191 | supercontig | scaffold_191:18515..19623 . |
Blast
The following BLAST results are available for this feature:
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