|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050969 ID=TCONS_00050969|Name=TCONS_00050969|organism=Clytia hemisphaerica|type=transcript|length=1055bp
GACTATTGATGGGCCATGATTTTGGCTGGTCAGTGGATTGACTCACAAGG
CTTTggcaatttttcagccaaaacataATTTCATCGGTGGACTTTACAGT
CTGTGTTAGGGTTATTCATACAGATTGCTTACAAAAAAGCCCTAGTTTTA
cagtagattttcattttatatattttcaggctAGTTATCATCATTTTCTC
TATGAAATACTGTTTATAACAACAATTCTCAGAAAAACCATCCCACAGAA
AGTTAAGTATTGGCCATCCAAGCACTGGTACAATGAAGCAAAGATTGACT
CAGGATGACtcaacatttttgcattttgaccTTCATGTTAGGGTAAGGGA
AAAGTATGCTAAAAGAGGAAATTATAACCTGCAGAAACTATATTACGTGC
ATTATTTAGCTTGAACAAAACAGAATAGAATGGAGTAATATATAAATATA
TGCAATGGATGttgatattttgtaaatattttctggaCAACCGTGGATAT
GAACAGTTAAACCTGGTTGAGCACCGCCTATATATCCTTTGAAATTGGAT
ATATACTTGGAAAATGTTCTCTGGAAAAAGTGGATTACCATACACGTATT
ATGTAAATTTAATCAGTCTGGAGAATATTTTTCGAATCTGCATTTATTTG
GATGTTTGTTTTGTATCCATGTTGTCCCTGGAAATATGGTCCAAACAAGT
GATCAGAGCCAGGAAACACGTGGGCCAAAtttaccaaatgtaaacaaact
agcAGACTAGAAGACCCCAAAAGTGCTTCTTTTTAAATTCTACAATTCTA
CTTGGACACATATTTTCACTTGTTATATATAACAAGTTTTTCTGAGCACA
ATGATTACCTTTGCCAATATTTTTTCCACATGTAaatgtatttaattttt
tagcaatGAGTTACACATGTATTGGATTTAGTCCTCTATGGGGCatatta
atataattttctAGTCCAGCTTTCAAGTTATACAATCTGAATCAGTACTA
ATTAAAAATCAGTTGTAAGGTTTTGGTCTTTTTTTATAGTcttctcaatt
ttatt Run BLAST on NCBI transcript from alignment at scaffold_19:632986..634040 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050969 ID=TCONS_00050969|Name=TCONS_00050969|organism=Clytia hemisphaerica|type=transcript|length=1055bp|location=Sequence derived from alignment at scaffold_19:632986..634040 (Clytia hemisphaerica)
aataaaattgagaagACTATAAAAAAAGACCAAAACCTTACAACTGATTT
TTAATTAGTACTGATTCAGATTGTATAACTTGAAAGCTGGACTagaaaat
tatattaatatGCCCCATAGAGGACTAAATCCAATACATGTGTAACTCat
tgctaaaaaattaaatacattTACATGTGGAAAAAATATTGGCAAAGGTA
ATCATTGTGCTCAGAAAAACTTGTTATATATAACAAGTGAAAATATGTGT
CCAAGTAGAATTGTAGAATTTAAAAAGAAGCACTTTTGGGGTCTTCTAGT
CTgctagtttgtttacatttggtaaaTTTGGCCCACGTGTTTCCTGGCTC
TGATCACTTGTTTGGACCATATTTCCAGGGACAACATGGATACAAAACAA
ACATCCAAATAAATGCAGATTCGAAAAATATTCTCCAGACTGATTAAATT
TACATAATACGTGTATGGTAATCCACTTTTTCCAGAGAACATTTTCCAAG
TATATATCCAATTTCAAAGGATATATAGGCGGTGCTCAACCAGGTTTAAC
TGTTCATATCCACGGTTGtccagaaaatatttacaaaatatcaaCATCCA
TTGCATATATTTATATATTACTCCATTCTATTCTGTTTTGTTCAAGCTAA
ATAATGCACGTAATATAGTTTCTGCAGGTTATAATTTCCTCTTTTAGCAT
ACTTTTCCCTTACCCTAACATGAAggtcaaaatgcaaaaatgttgaGTCA
TCCTGAGTCAATCTTTGCTTCATTGTACCAGTGCTTGGATGGCCAATACT
TAACTTTCTGTGGGATGGTTTTTCTGAGAATTGTTGTTATAAACAGTATT
TCATAGAGAAAATGATGATAACTagcctgaaaatatataaaatgaaaatc
tactgTAAAACTAGGGCTTTTTTGTAAGCAATCTGTATGAATAACCCTAA
CACAGACTGTAAAGTCCACCGATGAAATtatgttttggctgaaaaattgc
cAAAGCCTTGTGAGTCAATCCACTGACCAGCCAAAATCATGGCCCATCAA
TAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050969-exon-scaffold_19-1491911889:632986..634040 | TCONS_00050969-exon-scaffold_19-1491911889:632986..634040 | Clytia hemisphaerica | exon |
| TCONS_00050969-exon-scaffold_19-1510915933:632986..634040 | TCONS_00050969-exon-scaffold_19-1510915933:632986..634040 | Clytia hemisphaerica | exon |
| TCONS_00050969-exon-scaffold_19-1575043694:632986..634040 | TCONS_00050969-exon-scaffold_19-1575043694:632986..634040 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:632986..634040 . |
Blast
The following BLAST results are available for this feature:
|
