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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050938 ID=TCONS_00050938|Name=TCONS_00050938|organism=Clytia hemisphaerica|type=transcript|length=990bp
TGGGTCTGGACTACACAAGGCAGAGAAATTCCCTAGTAACAAAAATAGGA
CAACCCTCCACTTCCTAGAGAACATAAAGCTTCCAGTCacatgaaaacat
taaaaaagatgCTATGAGAAGATCAGGCATAgaaattttctatattttag
AAGAAATGAGACTTTTTTCCAAAGTTATTGTACATCAAACAATATGTTGT
GGTTAAATTGAGGTTACCTTATATTCTGCATCATATAggtatttaaaaat
aataaagcaAACGTGCTCAAATTTTGGTAATGGCCTAACCACACCTTACA
TAAGCCAAATTgtaaaagcaatgaaaattgtaaaagcATGCTAAATTAGC
CTAAAAATCATGGCTAGTAGTCTTCTTTGTTGTTTATTTGAGGTTGCTAC
CGCTGCTATTACACGGCTGTAGAAAAATATAACAGAGATCACCTCTCAAG
ATGCCTAATTATGAGTAGGAGGGAaaagtttatttcaaaatattttggtg
aGCTTTTGAGAGTGTTTGAGGCTACCATTTTTCACTAAAAGTAACCTCCA
AAATCTTACCAAATTTTGGTTACTTCCCCCCGCCTTTTTTGTCCAGTTAT
TCAATCACTTAAGAGTAGTCCGTTAACTTTTTACATGTTAGAACTGTTTA
TACTTAATTGTGGTGATTGTAAGGTAAGCCTATAAAAATGAGGGGAGTTG
CTAAAAATGAGGGGAGTTGCTAAAAATGACACCCAATGATCccaatcaaa
aatagtgtgacattttgaaaaataccccaaaacAACTTTAATCGATAAgt
cttgaaattttacaatgtTGTGGGAAATACTAAGACATTATGAATAAAGA
TTTCTTTTCGTTAATTGTGCTAAAAATGTGGCTTCAACCTGCTTCAACTC
AAAATTTGTATTGTTTTTAGAAATGTAAGCCCCCCTAATTAGATAAGAGA
TCTTAAAATGGGACTTTCTTAACTTGACAGAGGAAaggtt Run BLAST on NCBI transcript from alignment at scaffold_19:70618..71607 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050938 ID=TCONS_00050938|Name=TCONS_00050938|organism=Clytia hemisphaerica|type=transcript|length=990bp|location=Sequence derived from alignment at scaffold_19:70618..71607 (Clytia hemisphaerica)
aacctTTCCTCTGTCAAGTTAAGAAAGTCCCATTTTAAGATCTCTTATCT
AATTAGGGGGGCTTACATTTCTAAAAACAATACAAATTTTGAGTTGAAGC
AGGTTGAAGCCACATTTTTAGCACAATTAACGAAAAGAAATCTTTATTCA
TAATGTCTTAGTATTTCCCACAacattgtaaaatttcaagacTTATCGAT
TAAAGTTgttttggggtatttttcaaaatgtcacactatttttgattggG
ATCATTGGGTGTCATTTTTAGCAACTCCCCTCATTTTTAGCAACTCCCCT
CATTTTTATAGGCTTACCTTACAATCACCACAATTAAGTATAAACAGTTC
TAACATGTAAAAAGTTAACGGACTACTCTTAAGTGATTGAATAACTGGAC
AAAAAAGGCGGGGGGAAGTAACCAAAATTTGGTAAGATTTTGGAGGTTAC
TTTTAGTGAAAAATGGTAGCCTCAAACACTCTCAAAAGCtcaccaaaata
ttttgaaataaactttTCCCTCCTACTCATAATTAGGCATCTTGAGAGGT
GATCTCTGTTATATTTTTCTACAGCCGTGTAATAGCAGCGGTAGCAACCT
CAAATAAACAACAAAGAAGACTACTAGCCATGATTTTTAGGCTAATTTAG
CATgcttttacaattttcattgcttttacAATTTGGCTTATGTAAGGTGT
GGTTAGGCCATTACCAAAATTTGAGCACGTTtgctttattatttttaaat
accTATATGATGCAGAATATAAGGTAACCTCAATTTAACCACAACATATT
GTTTGATGTACAATAACTTTGGAAAAAAGTCTCATTTCTTctaaaatata
gaaaatttcTATGCCTGATCTTCTCATAGcatcttttttaatgttttcat
gtGACTGGAAGCTTTATGTTCTCTAGGAAGTGGAGGGTTGTCCTATTTTT
GTTACTAGGGAATTTCTCTGCCTTGTGTAGTCCAGACCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050938-exon-scaffold_19-1491911889:70618..71607 | TCONS_00050938-exon-scaffold_19-1491911889:70618..71607 | Clytia hemisphaerica | exon |
| TCONS_00050938-exon-scaffold_19-1510915933:70618..71607 | TCONS_00050938-exon-scaffold_19-1510915933:70618..71607 | Clytia hemisphaerica | exon |
| TCONS_00050938-exon-scaffold_19-1575043694:70618..71607 | TCONS_00050938-exon-scaffold_19-1575043694:70618..71607 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:70618..71607 . |
Blast
The following BLAST results are available for this feature:
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