TCONS_00050897 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050897
Unique NameTCONS_00050897
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length826

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050897 ID=TCONS_00050897|Name=TCONS_00050897|organism=Clytia hemisphaerica|type=transcript|length=826bp
ACCATTCCTTATTTGCAAGTGCTGTACTAAACTTCGCAGAGGATTCAATT
ATCAACCAAAGATATACGGTTCTGAGCTTGAAAATGTTTTGGCAGATAGG
TTGCTTATTGTTTTTATGTTACATAGAACATATACTTGCTGCTGCGAATG
TAGACAATTGCATGTATTTTGAAGACGATGCTAAAAAGTTATGTCCAAAA
ATACCACTCCAAGACAAACGTATTTATGAAGAAGGTGACGAGGCAGCTGA
GTACATTGAACTCTCATATAATGAACTTCCAATTGGTGCTTCCATATTTG
CTGTATCCTATATGTTTACTaactcatcatcatcatcatcatcatcatca
tcaacagAGAAAAAACCCGCACAAACCCTTGACATATTTATTGACGCAGT
ACTTCACAGCATAAAACTCTTGTCAAATGGCAGCACCAATGAACGACTGA
CATCTTACTTTGACAAAGCAATTTCTCCTGCCAGAAACGATGGTGCTGTT
GACATTGATATTAGTGGTTCACCAAGGGAAAAGTTACCACAATTTCTTGC
TTTCCATTTTGTAAAGATCGAAGAAGACTATTGTGCATCAAAGAAGTGTT
TAGATAAAATTGACCTTTTAATTAAAGAGGGATGCCCCGACATTGCTAAT
TTAACATCCGTTTATGTTCCTTGTTTCGATAACCCGATGTATTATCAAAT
ACCAATAATGACAGGTATTAAAGTCATTCACGATAAttttgcactctttt
ttctttacctataacttttgaaggaatgcTTCAATCtatataaatttggt
atcattggaaagatattagtgagtgg
Run BLAST on NCBI

protein sequence of TCONS_00050897-protein

>TCONS_00050897-protein ID=TCONS_00050897-protein|Name=TCONS_00050897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
HSLFASAVLNFAEDSIINQRYTVLSLKMFWQIGCLLFLCYIEHILAAANV
DNCMYFEDDAKKLCPKIPLQDKRIYEEGDEAAEYIELSYNELPIGASIFA
VSYMFTNSSSSSSSSSSTEKKPAQTLDIFIDAVLHSIKLLSNGSTNERLT
SYFDKAISPARNDGAVDIDISGSPREKLPQFLAFHFVKIEEDYCASKKCL
DKIDLLIKEGCPDIANLTSVYVPCFDNPMYYQIPIMTGIKVIHDNFALFF
LYL
Run BLAST on NCBI

transcript from alignment at scaffold_19:778208..791948+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050897 ID=TCONS_00050897|Name=TCONS_00050897|organism=Clytia hemisphaerica|type=transcript|length=13741bp|location=Sequence derived from alignment at scaffold_19:778208..791948+ (Clytia hemisphaerica)
ACCATTCCTTATTTGCAAGTGCTGTACTAAACTTCGCAGAGGATTCAATT ATCAACCAAAGATATACGGTTCTGAGCTTGAAAATGTTTTGGCAGATAGG TTGCTTATTGTTTTTATGTTACATAGGTATGTAATTATTCATTCTTCCTT CTCTTGTGATCATATCCAGGggagtacactttttttaataagaatcaGTT AagattttgctgaggctcggNttttctcaaattttacacctttacagtgc actttttcccacctgctcaaaaatcaacccttacagtgcactgttcaaag tccaaaaaacctacccttaagggtcgcacgtccggtaggtcacttacctg gagtgccccccggagattagaacaactttaacatgagggacaaggacagt caagaagtctactttgttgaaaatttgcacaaaatacttagagaaaatgg tactatggcaCTCTtggttgagagggttgattaaaatataaatcaaagca cacaataaagtattcATTTTATCCAGAAAGAaatggcatgttgtttgctt tgttttgttgtttaaaATTAtatacttatcagtcctaaaaaatacaaatt tgaatataatgagggtaATGAGTCTAGTTAACCCTNTTTGACCACTaaat tgagaaatttcaggCTCAGTATTGTTCTTAccttcttaaattgttcttat tttttggcgattttgagcataattgttcttataatattgttcttataaaa aaagtgttgtTCCGTTCGTTATGTTTTGAACATAACAAATCTAGTGGCGC AAAACAATACGGAATTTGTTACCAATATCAGCTCTTCAAAATGTACCGTA CTTACCAATGACAATATCCCAAAAGTTCCCTTAACAATCGAATCGATCTG ATTGATCGAAACTCAAAATTATAATGAAATTGACCTAGTCTCCGTCTCGG AAGAGGACTAGGCCCGAACGTTTTCACAGTTTGACTTTCGTTTTCGGCTA TACGGCAGCGTTTTCAGGCAGAAAACGGAGGAAATCTGTGAAATTATGGC AGGGAATGGGGTCCTATTTTTCCAGTGTTTCTCAAGATTGGAGCACGATT ATTGTTCTAGAAAGTTCTTAAAGGCCTAATAGTTCCAGATTAGTATAATT TCATCAGAAAAAACATTTTCACCAAAGCTCCTTATTGATATGTGAAGGCT ACCAAAAATGGCAATGTCCTCCATCAAAACTCGTGGGGGGAAAAGATTTT GAAAACGACCGTACGTTCGGCCAAAAATCAGGTTTCAAAAATCGGACCCT TAGTGCAGGAAAATTTGGCTGAAAATCGACCATTATAGTGCAATTTTTTG AAATTTTTTGCCCTTTTCAGGGCAAAACTTTTTGAAATTTCTCAAATTTT ACCTCAAAATTTGATATTTTCTCAAATTTTACACCTTTACAGTGCACTTT TTCCCACCTGCTCAAAAATCAACCCTTACAGTGCACTGTTCAAAGTCCAA AAAACCTACCCTTAAGGGTCGCACGTCCGGTAGGTCACTTACCTGGAGTG CCCCCCGGAGATTAGAACAACTTTAACATGAGGGACAAGGGCAGTCAAGA AGTCTACTTTGTTGAAAATTTGCACAAAATACTTAGAGAAAATGGTACTA TGGCACTCTTGGTTGAGAGGGTTGATTAAAATAGAAATCAAAGCACACAA TAAAGTATTCATTTTATCCAGAAAGAAATGGCATGTTGTTTGCTTTGTTT TGGTGTTTAAAATTAtatacttatcagtcctaaaaaatacaaatttgaat ataatgagggtaATGAGTCTAGTTAACCCcagttaaatgttactatattt acaagaaaggattactgaaaaatactactgtagatgaactaaactcaaaa tctaaaactttaccataaatttacattacgacaaagtaAAGATCTTTaat aatagcaacaaagaaagaaatatgGCTCAAAGTTGCCctccccagcggca ccccttaTCACGCCATCGCGCAAAAAAGTTTGCTCCATCATGACATCatg catcacgaaaatcgctaaaatttcttttgccctatcacgcatcacgccaa aatcttgatcacgccatcacgccaaaaaaaatctctaatcacgccatcac gctaACCGCTGGGGAGCCTCTTTAAAAACaaagctagtcagagcttcaat tcagtaggtatagagctttctagatttgaaaacagacactgcattggttt acaagactagagaaagatgtcaaccatccacacggttttttcgattcatg aaaaaaataaagtatttatcaaaaaaagttttttttttttgtaatcaatt ccaacaaacaaaaatcaatataacagttttttgaaaaccatcccacggTT TAAACATTATCGCACCaccaaaattgtcaaaataagtcaatataatttct atcaacaatttttcgtaaaatgtttttttttcaacatctgataccaatca tggctggaggcatcatgtgtagagtgactgtgtggcatttcatcgCTTTT AATTACCATGATACTTGTTGCTTAAAATGTTTTGCATCAGCTCACATCAG CTCATCTCCATTACTTCTGGTTACAAAAATGGAATTTTTCTGTCATACAG TCACACTATTATGCTGTCCAGGGTTTCGGTAGCGGTATCCCTTCTCTACC AAGAGACATGAAGCCGATCAGGCGTCATGTCTCTTCATCTTATACCTGTA GACGTGGAATATGACATGACATATCAGTTNTCTCTTCAACTTATACCTGT AGACGTGGAACATGACATGACATAATCAGTGGAGGGATTCAAAGACTGTT ATGTGCCTGAGTGAAGCCTCCCGAGGAGAGTGAGAAgattgagaaaaaga aaaagagatgtTGAAAGAAATAGGTATTTTGAAAGCAGTGGGGAAAATTA GATGGTGGGTAAATAAACATAGAAATATTCTTACATTGAGGTGAAGATTG CGTGATCTTGACAGTAGTCTTGAGTGCAGGATGCAAAGagcgaaaagaaa ttttttcttttttttgaaatttggcgcTGTTGTAAACAACTTGATGTAAC CATGGAGACTACATTTCGATTGGTTCCTGTTCAGAGATTCTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNCGTCGAGAACTTGCTACACGTATTATGTATATAATTATAttagtcg acttgaatcatgatattACATATACactactcacatttcactggatgcat tttcgctgtgaaattatccgcgaAATCAgtcaaaattccttcggtatttc ggaattcttcATATGACGAATTGttcacaaaaatcttttcttttttctcc acTTTTAGAACATATACTTGCTGCTGCGAATGTAGACAATTGCATGTATT TTGAAGACGATGCTAAAAAGTTATGTCCAAAAATACCACTCCAAGACAAA CGTATTTATGAAGAAGGTGACGAGGCAGCTGAGTACATTGAACTCTCATA TAATGAACTTCCAATTGGTGCTTCCATATTTGCTGTATCCTATATGTTTA CTaactcatcatcatcatcatcatcatcatcatcaacagAGAAAAAACCC GGTATATTTTTAATCTTCTTCACAGTGTGTCCCTAAAAAataagcggaca aatttttatactaAGTAAAATCTATAATTTAATTTATGCCAAATTTAATG ATTTGTAtacttaatatttcaaaaacctattcaatcatcttgggaatcga atatctattgattgaatAGAGCATTATGATTTTATAAGCAGATATTCATT GGGTAAAAGTttgttattgagatttattaacccgaggtgatgtaatattc aacgagcCCCCGGGCccgggggtactacccttgtcgaccgacgggggtgc tccgctgagtttcgaaaaatggaccctacgtgggactcgaaatttgcgaa aaaagtgaccctgaatgggacNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTATGGGCT GAGCAGCCAGGACAATGACACTAGGAATGTAAGGAGGCCCTAAGGTTACC GAAGGTAAGCCAACACCCCTAAAGGAGGTGAGActaacaaagagaaaaaa aaagaaaattactgtggaccgtggccaggcagtgtaaaaaaaaaaataaa taaaaaaatttgtaacTGTAAGCACTGTGAACCGTGGTCAAGCAGTGTAA ATAGTATTTGTAAGCACTGTGGACCGTGGCCAGGCAGTGTAAAAATTGTA TATGTAAGCACTGTGGACCGTGGCCAGGCAGTGTAAAAATTGTATATGTA AGCACTGTGGACCGTGGCCAGGCAGTGTAATTGTATCTGTATCTGTAAGC ACTGTGAACCGTGGTCAAGCAGTGTAATAGTATCTGTAAGCACTGTGGAC CGTGGCCAGGcagtgtaaaaaataaataaattgtaaCTGTAAGCACTGTG AACCGTGGTCAAGCAGTGTAATAGTATCTGTAAGCACTGTGGACCGTGGC CAGGcagtgtaaaaaataaataaattgtaaCTGTAAGCACTGTGAACCGT GGTCAAGCAGTGTAATAGTATTTGTAAGCACTGTGGACCGTGGCCAGGCA GTGTAAAAATTGTATATGTAAGCACTGTGGACCGTGGCCAGGCAGTGTAA TTATATCTGTAAGCACTGTGAACCGTGGTCAAGCAGTGTAATAGTATCTG TAAGCACTGTGGACCGTGGCCAGGCAGTGTAAAAATTGTATATGTGAGCA CTGTGGACCGTGGCCAAGCAGTGTAAGAGACCACATAATTAGGATTGTTG AAAAGGGTAGATTCAGAAATGAAACCACCGGCTAAAATTTGCACAGCACA TCCCAAATGGTCAGTCCTTGGGCTAAAAAACCTGCCATCAGGAAAAACTC TAGGACCGAGGCGCTGGGTGGCGATTGGCTGATGACATCGACCCGTCGTG TACACctgaaagagaaaagaaaaaaaaaaaggagCAAACCAAGAAAGGAC ATGCGTTGGGTGGGTGGGCggtaaaactatttttgagTTATTTGGCAGAG GTGGAGAATGCAAGTGGAGTCTATTTATAGGATCTATATTGGCCGTAGTT TCAGAGATAATNggttaataaatccaataaccaacgaaaacctattgaat atatgttttattatatacctagaggcaaaaacGAAACATTATATATGTCA ATTATTGTTAAACGTTTCacataaaacactcccatataggatataatcga acgttcgaatgtttttatttttcaattttttaatgactttgagtcataaa atgtgttcatgaaattgacaatagatatatttcaatgaatttctttgata taacaacaaaaacgacaaaaaatctaactttgaatgcaaaatttgagaaa aaaattctaccgtggtataatagccatggtatatcaggaattattcaatg gctgtttttgcctacaggtatataataatatcaATTATTCAgtttagata ttttttttggaattttcgaTGTTCTTATCAAAAGAACGATAACAATTACA CATAAACTAGTCAACTTTGGGAAAAAAGAAccttacagtatatggccccc aaaatggAGGTTTTGCTTTAATGAGCCATATTTGTTCTTTGAAACCTGGG AAAGCTTTAAATTCAACCCTTACACATTTCTCTAATTTCgctaattttct tctttaattttttttcaaaaattaatttcgaAAGAAAGGGACTTGGACTA AAACCGTCAAAAGTCGAACAAGATTTGAAATTAACCCCTAAAAACTGGGT ATATCTGGGAAATATAAACATATACCAACATACGAACTCGTTAATTCGTt aattcaaagtttttcagCAAATTCGAAGTATTTCacgaaaaaataaacat tagaaGCTACTAGTATTTTGCACGGAATTTTGCACTCAGTCAGGCCATGT TCAAGTGATggttttttagcaattttaatttaatcCACGATGTCGGTGAA AGCAATGTCGGTGCTATGCTTTTTGATCAAGATATTTCGAAAAAACTAAA CCTCCGTtctgggggccattagaaaaatcTGACTCAACTTTGATTGAATA AAAATCATGCAAAAACCTTTATTTTAACCCTATATGGCCtgggggggggc tgtttctgttcggaggtcaaattattggtaatagctcgtgaaataagtat atgtaatcacatgataacgagtgcaattcgaatataattgcacgagtaaa ttttttgttattaaggttccgagtccgaaaggacgaggaaaatttgaaat aaaaaaatcacgaatgcaattttcgaattgtacgagttattatgtgatta cgagctaatcgcacaatggctttcactactttttcccagttaggaaagta aattacacaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgttgtt tattgattttctttctcacaaaataaatttcgaatgcaattaaaacgttc gatgcaaaaaaaatgtaagaaaaaacattaaaatcgattttgtaaacatt gattaacgattaattgctctctaaaGGATtcgattaacgattaattgctc tctttgagggtgtgccaaataagaaaaaataacccagcgtGCGATTATaa agcttttgccatgaaattttctgtaaatccctaacttttatttagcttca aaatgaaataaaatttgacacctaaaaattttcacaccttgagcatgatg acatttctgaaagtaaggtgtcacaaaaattgacacttttccaatacaaa tttattttcgattttagcctggaaTCCTCGATTAATAATTGCGCGTatag gccccgacaaagtcaaattttttcaaccaGTTGTTTTTTAAAGGCCCATT GCGCTGGGCGCTGGgccaaaataaaatttagcgtTCCCTATATTACCTGA ATTcactaaaaagattttaattgaggtaaacgttttgggggccatatact gtagaaAAAAGGGACGTTGTACTTATGAGCGTTTGAGTAATATCTTTGAT TTATCATTATAGCACAAACCCTTGACATATTTATTGACGCAGTACTTCAC AGCATAAAACTCTTGTCAAATGGCAGCACCAATGAACGACTGACATCTTA CTTTGACAAAGCAATTTCTCCTGCCAGAAACGATGGTGCTGTTGACATTG ATATTAGTGGTTCACCAAGGGAAAAGTTACCACAATTTCTTGCTTTCCAT TTTGTAAAGATCGAAGAAGACTATTGTGCATCAAAGAAGTGTTTAGATAA AATTGACCTTTTAATTAAAGAGGGATGCCCCGACATTGCTAATTTAACAT CCGTTTATGTTCCTTGTTTCGGTAAGttttaatttatttgtatcCAAAct ataattttcataaaaagcGCACTACTTCGAATATACGGACGgttatcatt tttttgttgattaTTATTGCCACCGCAGGGAGCCTAAAGCTCCCGAGGAT AGCATTCATAGCTttacgcataaggaagttgggcaaacatctcataattt tgcgcgcgtttttcagtattttagttccgcttaacgatagcattcttatc ttacggtctattgttttatcatcatcaaaaagacttcgccggagttattt tgatctgattacccattttgaaatgtcagtttgcctttttcttatccctg gagagttaaatgaatctaaggaaattcccttttctgggaaattccctttt atatcacaagtagttattaagcgctcttcatagattaaaaatattactct actcaaagtattcgaacagttatgttgctaaacgtgtacattatttaata acatatgaagagcagtatcttcagatatacgctttttataggaaaaacca gtaagtcatatgattctggctgggatgctcttaaatttataggagttttt caggcttaaatgtcaatattaataatgtcttaattttttcttaggttttg gccaaatttcagactcgtattcttataaaattgttcttataaaaaacgtg taagacaaggcacggatgtcactctaagtagactgtaaatcactcccttg acacatttgttagcaattgaaagaaatttgtctcagatgagaggNataac catcattctttcaaaataaacaaaaatcgtttaattctgataaatctaca agtcagaatcttcatttcaatgaaaacctccgttttgtgggccgtctccg ttttgggggccatatactgtatataagaaagtacaaaatatgatctctcg cttaccagaccccCTTTTTGAAAGCGGTCTTATATTTTtacggtacaata tgaaatacagcatttatgaaCGCGATTTTAGtcaatcagattgctcatat ttttcataacGTTTTGTATCTATATACAACCTTTTTTTTCTAGATAACCC GATGTATTATCAAATACCAATAATGACAGGTATTAAAGTCATTCACGATA AttttgcactcttttttctttacctataacttttgaaggaatgcTTCAAT Ctatataaatttggtatcattggaaagatattagtgagtgg

Coding sequence (CDS) from alignment at scaffold_19:778208..791948+

>TCONS_00050897 ID=TCONS_00050897|Name=TCONS_00050897|organism=Clytia hemisphaerica|type=CDS|length=3048bp|location=Sequence derived from alignment at scaffold_19:778208..791948+ (Clytia hemisphaerica)
CATTCCTTATTTGCAAGTGCTGTACTAAACTTCGCAGAGGATTCAATTAT
CAACCAAAGATATACGGTTCTGAGCTTGAAAATGTTTTGGCAGATAGGTT
GCTTATTGTTTTTATGTTACATAGAACATATACTTGCTGCTGCGAATGTA
GACAATTGCATGTATTTTGAAGACGATGCTAAAAAGTTATGTCCAAAAAT
ACCACTCCAAGACAAACGTATTTATGAAGAAGGTGACGAGGCAGCTGAGT
ACATTGAACTCTCATATAATGAACTTCCAATTGGTGCTTCCATATTTGCT
GTATCCTATATGTTTACTaactcatcatcatcatcatcatcatcatcatc
aacagAGAAAAAACCCGCACAAACCCTTGACATATTTATTGACGCAGTAC
TTCACAGCATAAAACTCTTGTCAAATGGCAGCACCAATGAACGACTGACA
TCTTACTTTGACAAAGCAATTTCTCCTGCCAGAAACGATGGTGCTGTTGA
CATTGATATTAGTGGTTCACCAAGGGAAAAGTTACCACAATTTCTTGCTT
TCCATTTTGTAAAGATCGAAGAAGACTATTGTGCATCAAAGAAGTGTTTA
GATAAAATTGACCTTTTAATTAAAGAGGGATGCCCCGACATTGCTAATTT
AACATCCGTTTATGTTCCTTGTTTCGATAACCCGATGTATTATCAAATAC
CAATAATGACAGGTATTAAAGTCATTCACGATAAttttgcactctttttt
ctttacctataaCATTCCTTATTTGCAAGTGCTGTACTAAACTTCGCAGA
GGATTCAATTATCAACCAAAGATATACGGTTCTGAGCTTGAAAATGTTTT
GGCAGATAGGTTGCTTATTGTTTTTATGTTACATAGAACATATACTTGCT
GCTGCGAATGTAGACAATTGCATGTATTTTGAAGACGATGCTAAAAAGTT
ATGTCCAAAAATACCACTCCAAGACAAACGTATTTATGAAGAAGGTGACG
AGGCAGCTGAGTACATTGAACTCTCATATAATGAACTTCCAATTGGTGCT
TCCATATTTGCTGTATCCTATATGTTTACTaactcatcatcatcatcatc
atcatcatcatcaacagAGAAAAAACCCGCACAAACCCTTGACATATTTA
TTGACGCAGTACTTCACAGCATAAAACTCTTGTCAAATGGCAGCACCAAT
GAACGACTGACATCTTACTTTGACAAAGCAATTTCTCCTGCCAGAAACGA
TGGTGCTGTTGACATTGATATTAGTGGTTCACCAAGGGAAAAGTTACCAC
AATTTCTTGCTTTCCATTTTGTAAAGATCGAAGAAGACTATTGTGCATCA
AAGAAGTGTTTAGATAAAATTGACCTTTTAATTAAAGAGGGATGCCCCGA
CATTGCTAATTTAACATCCGTTTATGTTCCTTGTTTCGATAACCCGATGT
ATTATCAAATACCAATAATGACAGGTATTAAAGTCATTCACGATAAtttt
gcactcttttttctttacctataaCATTCCTTATTTGCAAGTGCTGTACT
AAACTTCGCAGAGGATTCAATTATCAACCAAAGATATACGGTTCTGAGCT
TGAAAATGTTTTGGCAGATAGGTTGCTTATTGTTTTTATGTTACATAGAA
CATATACTTGCTGCTGCGAATGTAGACAATTGCATGTATTTTGAAGACGA
TGCTAAAAAGTTATGTCCAAAAATACCACTCCAAGACAAACGTATTTATG
AAGAAGGTGACGAGGCAGCTGAGTACATTGAACTCTCATATAATGAACTT
CCAATTGGTGCTTCCATATTTGCTGTATCCTATATGTTTACTaactcatc
atcatcatcatcatcatcatcatcaacagAGAAAAAACCCGCACAAACCC
TTGACATATTTATTGACGCAGTACTTCACAGCATAAAACTCTTGTCAAAT
GGCAGCACCAATGAACGACTGACATCTTACTTTGACAAAGCAATTTCTCC
TGCCAGAAACGATGGTGCTGTTGACATTGATATTAGTGGTTCACCAAGGG
AAAAGTTACCACAATTTCTTGCTTTCCATTTTGTAAAGATCGAAGAAGAC
TATTGTGCATCAAAGAAGTGTTTAGATAAAATTGACCTTTTAATTAAAGA
GGGATGCCCCGACATTGCTAATTTAACATCCGTTTATGTTCCTTGTTTCG
ATAACCCGATGTATTATCAAATACCAATAATGACAGGTATTAAAGTCATT
CACGATAAttttgcactcttttttctttacctataaCATTCCTTATTTGC
AAGTGCTGTACTAAACTTCGCAGAGGATTCAATTATCAACCAAAGATATA
CGGTTCTGAGCTTGAAAATGTTTTGGCAGATAGGTTGCTTATTGTTTTTA
TGTTACATAGAACATATACTTGCTGCTGCGAATGTAGACAATTGCATGTA
TTTTGAAGACGATGCTAAAAAGTTATGTCCAAAAATACCACTCCAAGACA
AACGTATTTATGAAGAAGGTGACGAGGCAGCTGAGTACATTGAACTCTCA
TATAATGAACTTCCAATTGGTGCTTCCATATTTGCTGTATCCTATATGTT
TACTaactcatcatcatcatcatcatcatcatcatcaacagAGAAAAAAC
CCGCACAAACCCTTGACATATTTATTGACGCAGTACTTCACAGCATAAAA
CTCTTGTCAAATGGCAGCACCAATGAACGACTGACATCTTACTTTGACAA
AGCAATTTCTCCTGCCAGAAACGATGGTGCTGTTGACATTGATATTAGTG
GTTCACCAAGGGAAAAGTTACCACAATTTCTTGCTTTCCATTTTGTAAAG
ATCGAAGAAGACTATTGTGCATCAAAGAAGTGTTTAGATAAAATTGACCT
TTTAATTAAAGAGGGATGCCCCGACATTGCTAATTTAACATCCGTTTATG
TTCCTTGTTTCGATAACCCGATGTATTATCAAATACCAATAATGACAGGT
ATTAAAGTCATTCACGATAAttttgcactcttttttctttacctataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032259XLOC_032259Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050897-exon-scaffold_19-1491911889:778208..778333TCONS_00050897-exon-scaffold_19-1491911889:778208..778333Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1510915933:778208..778333TCONS_00050897-exon-scaffold_19-1510915933:778208..778333Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1575043694:778208..778333TCONS_00050897-exon-scaffold_19-1575043694:778208..778333Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1491911889:783416..783658TCONS_00050897-exon-scaffold_19-1491911889:783416..783658Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1510915933:783416..783658TCONS_00050897-exon-scaffold_19-1510915933:783416..783658Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1575043694:783416..783658TCONS_00050897-exon-scaffold_19-1575043694:783416..783658Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1491911889:790420..790728TCONS_00050897-exon-scaffold_19-1491911889:790420..790728Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1510915933:790420..790728TCONS_00050897-exon-scaffold_19-1510915933:790420..790728Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1575043694:790420..790728TCONS_00050897-exon-scaffold_19-1575043694:790420..790728Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1491911889:791801..791948TCONS_00050897-exon-scaffold_19-1491911889:791801..791948Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1510915933:791801..791948TCONS_00050897-exon-scaffold_19-1510915933:791801..791948Clytia hemisphaericaexon
TCONS_00050897-exon-scaffold_19-1575043694:791801..791948TCONS_00050897-exon-scaffold_19-1575043694:791801..791948Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050897-proteinTCONS_00050897-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:778208..791948 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 33.739 23.3119 32.6386 37.2245 27.1419 40.4673 5.86793 12.8367 0 0.158858 0 0.0350391 42.9269 64.9931 0 0 125.598 107.629 2.97322 5.33456 17.6871 6.59403 0.94711 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050897 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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