|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050893 ID=TCONS_00050893|Name=TCONS_00050893|organism=Clytia hemisphaerica|type=transcript|length=404bp
TATTGCTGTAGAGCGATAGACGTGAGTTATACTCTGGTATAAAGAATAAT
TCTTAGTTGTTATCTCAAGAATCCGTAACAGAAGGATGGTTTCAAAGTTC
ACTTTTtcgctttttgcattttttgttttgatgtgtaTGGCTAATGCCAA
ATCACAGATGATATCAAAGAAGATTTCAGTCTGGGGAGACGTTGTTGATG
TTTGTGATGACAAGTACGTACATGGTTGGAGAGAATGCGCGTTACAATAC
GGGAAAAATGGATTCTCCTGTCAAAGCGATGTCTTTGATTTCAAAGAGAA
TTGTGAAGCCTTTTGTGATTTTTGTGAACTAGATCAGGCTGATTTTTATC
ATtagatttttataattttttgaggattttatttgaataaaatcttACCT
TTTG Run BLAST on NCBI transcript from alignment at scaffold_19:753011..754034+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050893 ID=TCONS_00050893|Name=TCONS_00050893|organism=Clytia hemisphaerica|type=transcript|length=1024bp|location=Sequence derived from alignment at scaffold_19:753011..754034+ (Clytia hemisphaerica)
TATTGCTGTAGAGCGATAGACGTGAGTTATACTCTGGTATAAAGAATAAT
TCTTAGTTGTTATCTCAAGAATCCGTAACAGAAGGATGGTTTCAAAGTTC
ACTTTTtcgctttttgcattttttgttttgatgtgtaTGGCTAATGGTAA
GTATGGTTTATAAATGTAATGTAAATTGGAATCtcttccttgagaaatac
acgaaattgaattttcttcctttagaAATACGCAAAATTGAATCTTTTTC
CTAGGAAATACATGAAATTGAATCTATTTCCCGAGGAATGCATGAAATTG
AATCTTTTTCCTTGAGAAATGCACGAAATTGAATctttttccttgagaaa
tacacaAAATTGAATCTTTTTCCTAGGAAtgcatgaaattgaaaatacgT
TAGAAATAAATTGGATAATACATAAAATTCAATAGTTTTCTTAGGGAatg
tataaatttgatatttttccttGAGAATAATATATGAAATTGTGACATCC
TTTTACATATGCATAATAATTGATCTTTTGCCTTGAAAATACATGAAACT
GAATACATTTTTTACTTTAGATTGCATCATTGTCTTTGAGAAATACATAT
AGAAAATACATTAAataattttgcttgaaaaatacaggaaattgattttt
tccttaaaaaatacaagaaattgaaTCTTCCTCTTGAGTAATTCATACAT
ATTTTGTTGCAGCACATGACACATTTTCTCACATGCACTTTCCTTgtctt
ttgttcatttttacaGCCAAATCACAGATGATATCAAAGAAGATTTCAGT
CTGGGGAGACGTTGTTGATGTTTGTGATGACAAGTACGTACATGGTTGGA
GAGAATGCGCGTTACAATACGGGAAAAATGGATTCTCCTGTCAAAGCGAT
GTCTTTGATTTCAAAGAGAATTGTGAAGCCTTTTGTGATTTTTGTGAACT
AGATCAGGCTGATTTTTATCATtagatttttataattttttgaggatttt
atttgaataaaatcttACCTTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050893-exon-scaffold_19-1491911889:753011..753156 | TCONS_00050893-exon-scaffold_19-1491911889:753011..753156 | Clytia hemisphaerica | exon |
| TCONS_00050893-exon-scaffold_19-1510915933:753011..753156 | TCONS_00050893-exon-scaffold_19-1510915933:753011..753156 | Clytia hemisphaerica | exon |
| TCONS_00050893-exon-scaffold_19-1575043694:753011..753156 | TCONS_00050893-exon-scaffold_19-1575043694:753011..753156 | Clytia hemisphaerica | exon |
| TCONS_00050893-exon-scaffold_19-1491911889:753777..754034 | TCONS_00050893-exon-scaffold_19-1491911889:753777..754034 | Clytia hemisphaerica | exon |
| TCONS_00050893-exon-scaffold_19-1510915933:753777..754034 | TCONS_00050893-exon-scaffold_19-1510915933:753777..754034 | Clytia hemisphaerica | exon |
| TCONS_00050893-exon-scaffold_19-1575043694:753777..754034 | TCONS_00050893-exon-scaffold_19-1575043694:753777..754034 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:753011..754034 + |
Blast
The following BLAST results are available for this feature:
|
