TCONS_00050787 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050787
Unique NameTCONS_00050787
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4301

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050787 ID=TCONS_00050787|Name=TCONS_00050787|organism=Clytia hemisphaerica|type=transcript|length=4301bp
gaaagtcatgtgatatactttcaaccaataagatttaattaTTGCAAGGG
GAAAACATACTCTATTTTGTTTACTGATTAcacataattaatctttagta
agtgttctgtttTCCCCATTTGTGACGTCATGCCGTGGCaaagaatatca
accaaccaaattttgtcattcaattcccgagacagcgtttcaattttaag
gccttgtttacatactaaagcaaaaaaatttcgcacatgtaaatgggtca
gtgtttgaggtccggcaaaatttctgggaaGTAGCCTATCCAGTGGTGCG
CGGATCTTGATGGGTTCCGTCTCCCTCGTAGATCTTtctcttgggaagtt
gatcttcaaattagttttcaaggttggcttggctgaaattttttcatcta
tggctcaaattttaggcaatttctcaaagtttttgaaaatgttaatttca
ttaaaaagcgccgggttatttttttcatgaatccttttagaagttttgcg
gtgcatttttttgcttgtttaagttaagtaaacgatatagcgctttcgcg
gGATTAATCTTTGATAGGCATTTCGGCGGGACGCTTATGTGACTAACTGC
TCGTGGTCGTCATCTTTAAGAGATGATTTATTGTCAGGGTTCTGAAGAAG
TGGCTAAACTCCGCTTGTTGATTTGAGTTTACTTCTTACGTGAGACCAAA
AGATCTTGGGTTTCTCTTTGGATTTGTCACAGATACTCTTCTCATATGCC
TGATGTGCCTTCACCATCATTGGATTTACTCTATTCCTTGTGAGTACATA
GTTGGTGCGGTGACGATCACGGTAGAGAGGTGAAGATCTTAACCACCTTC
TATTCAGCAATTTCTTCCTCTTGATTTCATCTTGCAGGTCCTTTTTGATA
AGGATTTTTCCTTTATTCTTCCAAAAGCTATTTCCTACTTCTTTCAATGG
TACAAACCTATTTCTGAGGTtgagtatagcttttttcttttcatttcaca
tttgctatctatgatttgcggttatgttaattaaatgactttaaaggctc
ggtgaaatggtggctgaatttCCATCcaatgttttgtcagatagtctcAA
GTTAAAGCTGTTGACGGTAAGTATTGCACAAGACGAGAGCAATTAATGCA
AGCAAAtgcaattgaatcaatcaaacataatcgaacAAATTTGAACACAA
TGCAGTCGCCCCTTGATAACCTGCCCTTTTAGAGGTTTTGTTAATGAGAC
TGTTTAGCTTcctttcttaaatttttaacattttccttttcctttcttCA
GGTCAACTGCACAGGGGATTTATTCCTTGAAATATTAACTTTACTGGATA
GTGTGAAACACAACATTTTGTTGTTTACATACAGACACTTTTTGTAGTTT
TATATTCACCTCttaaataattaccttttttttttaagttttttcatata
atttgaTGGCAGACTCGAGAAGTAATGCGTCTCGACGTGACTCAGAAAAT
CCAGATAAATCAGAACTCGACTCTTCACTTAGCAGTCGATCACCAACAGA
AACTGGCTCTGCCAacatcattttcagaagctctgAACTGCCACATGATA
GTAATGAATTCGTTTTACATTCGCCAAATGAATCTGATACTGATTCCAGA
CCATCTACACAAGATAACCCTCCCTTCTCTCCTTTTGCGTACGAGTCATG
TAGTCAAAATAGCTCAAGAAAAGGAAGACGAAAAAAAGCTGTAAAGAAGA
GTCAGAGAAGAAGTTCTCAAGAAGCTGAAAGGCCAATTAGTACTGTCGAA
GAGCCCCTTGATAAAAAAGAGTCAAACGTAAATTTACTTGAAAGAATTTC
TAGTAGTGATTCAAATGATGAATCACCAGagaaaatttcccaagaaaAAA
TTCCTAGCTGTACAGAACATCACATACGTAGATTGGACAAGAACCATAAT
AATTTCAAGGTGACATCTCTTGGTGTACAAACGGATTGGAGTTGGCTGAG
AGATCGTCAGAAACTAAAAGAGGAAGAAGTGTGCCAAGATGACTTAACCA
AAGTGATGGAAATGTTGAAACATGGAATGCATGGAGGAATCATAAGCCCA
ACACCTGCTATCATAATCAAAGAATCTCATGATAACGTTGTAGAGGACCG
GAGACTCATCTCTACCAAAAGAAACAGTTCCAAAGCTTATCGCCAAGATA
CGAAAAGGACGGGAGGTAGTTTTTCTACAAGTAACAACGAACATGAACCA
TCAAAGAACTCCCATCAGAAACTCATCAAGAAACCCTCTCGTTCTCTTGC
TCGATCAGCTACAAAAAAAAGACTCAACAGTGTAAAGTCCAATCGCAAGA
TAAAGTCAGCAACCTCCACATCACGGAAAAGTCTTGCTCATAACATTGAC
GAGGAAACCTCAGATGCTGCTTCTCAAGCTAAAAAGAATAATTTAACTTC
TCAGCCCGAGTTATTGAAATTTCACAGGGAAAAAACGTTGGGTGAAAACC
TTCCATCTCTGGAAAAAGCGGACGTTTCGAATAGTTCTGATGCAATGCCA
AGTGATGGGTTGTTCAGTGGACCCTGTCAATTCTGTGGAAAACCCATCAT
GACGGTACCACCCTTAGAAGAATTTGACGAAGATGACGCTGAGCTGTTTT
GCTGTCCAGAGTACAAACATTTTATCAAGTTGCACTTACAATCAGTGAAG
GACCTCGCCGATGATGGAAACGAAGAAGAAGCAGAGTTAATAGATATCAA
CCCCCATGCACCCTATGGAAATAACAAGCAGAGTCGAAAAGCTCCTAGAG
ATCGTATTGTTGAAAGAATGAGGGAAAGAGAATTCGAACGGCAAAGAGTA
GCAACACAAGCAAATATCTTCTCCTTTGCTCGACAAATGAAGACCATTCA
GTATTCACTAGCTTCAACAAAATGCATGGCTGAAGGATGGACTGTGAACC
CCAAACCTCCTGTAGAACAATCTTCCAATCGCGATGaagaaatatttcaa
gttgAAGTAAACTCTACTTTACTTCAGAGGTCGGAGGTATTGCATACCAG
GCTGTATGAGAATGGTAAAAGATTCCTTACCATCTTTCCAGATGGAACAG
GCTGTTGTTATTATCCTAATGGTAATGTAGCAGTCATGATCACCTCAACG
GAGAAAGAAAAGTACACCTACATTGTACAATCGAATGAGAAATACGACGA
TTTGGAAGATAGTGGTCTTCTTGCAATCTTTGAACCTTCTGGGAATGCTA
TCTGCTACTACGAGATCAACCAAAAGATCAGGCTGTTCATTAACCCACAC
GGTGGTATTGAGTTGGATAAGCAGGGTCGTCGAAAGAAAAGGTGGCAGTG
GTTTTACAGCAAAGGTCAGTCGCAAGCACCGGCTTTCCAACCTATTTGTA
TTCAGCTCAACAAATATTTGTCACTTCGCTTGCTTAACCAGAACAATATG
GCGTTGATTTTCTCTGCCCTCAAACGATCGATCAGATTTAATGTTGGATC
AAATCTAATGGCACATGGTCTTGAGGGGCATGGTACTTTCGCATGCGATT
CATCAGAACATTATTTATCGGACAAGAAGAAGGAACTGAGTGCACTTCTG
AGGGAAATACAAAATACCTTACGTTTTTCGAAGCATGCGGTTGTGAAATC
TAAATTACTGAGGCGAGAGTTCTCTTCTAGTGAGTCGCTACCTCCTATAA
CGTCCAGAAGCACAGATTCGGTGTACGTTGACTAAATTCTCACTATTAAT
ATGTTCTTCGTTCGTTCGTCGCAGTGAATTTGAACGAATCTCCAATCCCA
GTCAAATTGTAACACAACTTTTAATTAGATTAAAAGCATACCAATATTGT
AACGTAAGTTATCTATCAATAATAATCCAGTGTCTAAACTAGTTTCTCGA
AAAAAGTGTATGAAGTTTGAGATTCAGAGAGACTTAAAAGTATTTTAACA
CGCGTTTTAGAAATCacgctaaattttgaaaattgatatataatgttaaa
ttttgaaaattttgtttaaataatATTCAAATCAATGAGCGTGATTTCTA
AAACTCGTGTTAAAATGCTTCCACCTGAAGGCATGACAAATAAAGCGAAT
AGGAGTATAGAAACTCTTGAAAGGTTTTTATTTAACACTAAGAAATTAGT
TTTAGAAAGTTTGACCTTGTATTATATCATACTgtataattttgtttgaa
aatgtgtaaatattttaaataatttaataTCAAATTGTAAGTATGCGTGC
TAGAAAGTATATTTTAAGTAGTCATTTATTTTTATGGGATGTGTATATGG
A
Run BLAST on NCBI

transcript from alignment at scaffold_187:37066..45840+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050787 ID=TCONS_00050787|Name=TCONS_00050787|organism=Clytia hemisphaerica|type=transcript|length=8775bp|location=Sequence derived from alignment at scaffold_187:37066..45840+ (Clytia hemisphaerica)
gaaagtcatgtgatatactttcaaccaataagatttaattaTTGCAAGGG
GAAAACATACTCTATTTTGTTTACTGATTAcacataattaatctttagta
agtgttctgtttTCCCCATTTGTGACGTCATGCCGTGGCaaagaatatca
accaaccaaattttgtcattcaattcccgagacagcgtttcaattttaag
gccttgtttacatactaaagcaaaaaaatttcgcacatgtaaatgggtca
gtgtttgaggtccggcaaaatttctgggaaGTAGCCTATCCAGTGGTGCG
CGGATCTTGATGGGTTCCGTCTCCCTCGTAGATCTTtctcttgggaagtt
gatcttcaaattagttttcaaggttggcttggctgaaattttttcatcta
tggctcaaattttaggcaatttctcaaagtttttgaaaatgttaatttca
ttaaaaagcgccgggttatttttttcatgaatccttttagaagttttgcg
gtgcatttttttgcttgtttaagttaagtaaacgatatagcgctttcgcg
gGATTAATCTTTGATAGGCATTTCGGCGGGACGCTTATGTGACTAACTGC
TCGTGGTCGTCATCTTTAAGAGATGATTTATTGTCAGGGTTCTGAAGAAG
TGGCTAAACTCCGCTTGTTGATTTGAGTTTACTTCTTACGTGAGACCAAA
AGATCTTGGGTTTCTCTTTGGATTTGTCACAGATACTCTTCTCATATGCC
TGATGTGCCTTCACCATCATTGGATTTACTCTATTCCTTGTGAGTACATA
GTTGGTGCGGTGACGATCACGGTAGAGAGGTGAAGATCTTAACCACCTTC
TATTCAGCAATTTCTTCCTCTTGATTTCATCTTGCAGGTCCTTTTTGATA
AGGATTTTTCCTTTATTCTTCCAAAAGCTATTTCCTACTTCTTTCAATGG
TACAAACCTATTTCTGAGGTtgagtatagcttttttcttttcatttcaca
tttgctatctatgatttgcggttatgttaattaaatgactttaaaggctc
ggtgaaatggtggctgaatttCCATCcaatgttttgtcagatagtctcAA
GTTAAAGCTGTTGACGGTAAGTATTGCACAAGACGAGAGCAATTAATGCA
AGCAAAtgcaattgaatcaatcaaacataatcgaacAAATTTGAACACAA
TGCAGTCGCCCCTTGATAACCTGCCCTTTTAGAGGTTTTGTTAATGAGAC
TGTTTAGCTTcctttcttaaatttttaacattttccttttcctttcttCA
GGTCAACTGCACAGGGGATTTATTCCTTGAAATATTAACTTTACTGGATA
GTGTGAAACACAACATTTTGTTGTTTACATACAGACACTTTTTGTAGTTT
TATATTCACCTCttaaataattaccttttttttttaagttttttcatata
atttgaTGGCAGACTCGAGAAGTAATGCGTCTCGACGTGACTCAGAAAAT
CCAGATAAATCAGAACTCGACTCTTCACTTAGCAGTCGATCACCAACAGA
AACTGGCTCTGCCAacatcattttcagaagctctgAACTGCCACATGATA
GTAATGAATTCGTTTTACATTCGCCAAATGAATCTGATACTGATTCCAGA
CCATCTACACAAGATAACCCTCCCTTCTCTCCTTTTGCGTACGAGTCATG
TAGTCAAAATAGCTCAAGAAAAGGAAGACGAAAAAAAGCTGTAAAGAAGA
GTCAGAGAAGAAGTTCTCAAGAAGCTGAAAGGCCAATTAGTACTGTCGAA
GAGCCCCTTGATAAAAAAGAGTCAAACGTAAATTTACTTGAAAGAATTTC
TAGTAGTGATTCAAATGATGAATCACCAGagaaaatttcccaagaaaAAA
TTCCTAGCTGTACAGAACATCACATACGTAGATTGGACAAGAACCATAAT
AATTTCAAGGTGACATCTCTTGGTGTACAAACGGATTGGAGTTGGCTGAG
AGATCGTCAGAAACTAAAAGAGGAAGAAGTGTGCCAAGATGACTTAACCA
AAGTGATGGAAATGTTGAAACATGGAATGCATGGAGGAATCATAAGCCCA
ACACCTGGTAATCTAATTAAGCCCATACAACTGAATGAACTTTCTTCGTT
TGAAAATAATACTATTTGACCTGATTTGACGAATTGATTACAGCAAATAT
ATGacctttttttatgtttttcattttgaagcaTATATTGTATGTCCCCT
TCTCCCATTTATAGCTATCATAATCAAAGAATCTCATGATAACGTTGTAG
AGGACCGGAGACTCATCTCTACCAAAAGAAACAGTTCCAAAGCTTATCGC
CAAGATACGAAAAGGACGGGAGGTAGTTTTTCTACAAGTAACAACGAACA
TGAACCATCAAAGAACTCCCATCAGAAACTCATCAAGAAACCCTCTCGTT
CTCTTGCTCGATCAGCTACAAAAAAAAGACTCAACAGTGTAAAGTCCAAT
CGCAAGATAAAGTCAGCAACCTCCACATCACGGAAAAGTCTTGCTCATAA
CATTGACGAGGAAACCTCAGATGCTGCTTCTCAAGCTAAAAAGAATAATT
TAACTTCTCAGCCCGAGTTATTGAAATTTCACAGGGAAAAAACGTTGGGT
GAAAACCTTCCATCTCTGGAAAAAGCGGACGTTTCGAATAGTTCTGATGC
AATGCCAAGTGATGGGTTGTTCAGTGGACCCTGTCAATTCTGTGGAAAAC
CCATCATGACGGTACCACCCTTAGAAGAATTTGACGAAGATGACGCTGAG
GTTTGCAAATACTATTTTACAATGTTTTAGCGCTGGAAGAAAATAAACTC
TACGAGTGTATCTCTAACACCCAGTAAGTAGGTTTGATATTGATACTGGT
ATCACCTTCTTTTTTATCCAGCTGTTTTGCTGTCCAGAGTACAAACATTT
TATCAAGTTGCACTTACAATCAGTGAAGGACCTCGCCGATGATGGAAACG
AAGAAGAAGCAGAGTTAATAGATATCAACCCCCATGCACCCTATGGAAAT
AACAAGCAGAGTCGAAAAGCTCCTAGAGATCGTATTGTTGAAAGGTACTA
TATCTCAACACTGGGCTAAATAGTATGAATaataaagttttataaaaaat
ttacctaaataaaaatttgacgaatattttttggaaatggCTTGTTCATG
TTTACAGTTTTGTGATTAAAGTATATCCTTTGAGAGGGCGACTTATTTCC
TTATAATTGCCTTTTCAGAATGAGGGAAAGAGAATTCGAACGGCAAAGAG
TAGCAACACAAGCAAATATCTTCTCCTGTAAGTGCACCCATTTCTTCGAG
TGTGTCCTGTTACTACGTATCAAGTTTTTTCTGGTCAACCATGTCAACAG
CACTAATTTGAATACTTTTAAACTAATTGACATTTCGTGAATATTAACTT
CTTTAAAATAATATTCTCATTTTTCGTTCAGTTGCTCGACAAATGAAGAC
CATTCAGTATTCACTAGCTTCAACAAAATGCATGGCTGAAGGATGGACTG
TGAACCCCAAACCTCCTGTAGAACAATCTTCCAATCGCGATGaagaaata
tttcaagttgAAGTAAACTCTACTTTACTTCAGGtaactttcactttcaa
ttttcaTAAAGGTTTTTTTTCCATTTGGCTTTCttcaatacacgcttttt
ttataagaatatcatctataagaatatcgggtgaaaattggccaaatcgt
aagaataccctaagaataccctttAGGGTGAgcttcacagaatttgataa
gaatacaatcattttgtatttggttaacaaaAAAATACTGCTTCAGTTGT
TAGACTTGAATTcaaactttgaggcagaaatgtaattttagctccaaatg
ttcattcaaaagtccaaaactctcaaattgatcatttctcatgtttgtaa
aaaagtctaaaaaagtaagagtacgttaagaatatttaaccctcaatttt
ggcaatttcgtaagaatacttgaccctcatccaaagtaccctattcttat
aaaaaaatagcgTGTATGCAGCACTGTAATGATGAATAATGAAACAAACT
GTTTGTTATCATTTAGAGGTCGGAGGTATTGCATACCAGGCTGTATGAGA
ATGGTAAAAGATTCCTTACCATCTTTCCAGATGGAACAGGCTGTTGTTAG
TATCCTTTTCTTAATAATGTGATGATATCACTGACAAGTGCTAATATTCT
ACATGAGCGTTTTGTAAGGAGATAACACATCTTTTAGAAGGAGGACAGAG
ATCATTTTGGGAATAAATTCCCATTCCCGTTCCCAATATTTAATGAGTAA
ATCTATATCTTTGGAATTAAACTTAACGTCATGAGCACCAGTTATCCTAA
TGGTAATGTAGCAGTCATGATCACCTCAACGGAGAAAGAAAAGTACACCT
ACATTGTACAATCGGTAAGCCCGAATACGTTATTAATGCCGACAACTTTC
ACGCCCACTGCCAGCGTCTTCAAACAGAAAGCGATTGTTCTGGTATGCTA
CAAGGGAGAGAgatttcttttaaagaaaaaatttgatttattctGCATTT
TAACTTACACTTAAGTAAGAAATAGACCCTTAATTTGCTCCTTCAAAGCT
TTAACGTTTGAGATTTGTTCGTctgtatttctttttcaattcagAATGAG
AAATACGACGATTTGGAAGATAGTGGTCTTCTTGCAATCTTTGAACCTTC
TGGGAATGCTATCTGCTACTACGAGATCAACCAAAAGATCAGGTGATTCc
gataattcactttttggacctaccccggtggaggtcctttaaattaacct
gtgtttgttcgtccgttcgtccgtccgtttgtctgttaccaacttttctc
agggtTGAATCAtaggaatcttttgatttttggtacaaaggtgcaaaatg
gtagtggccaaaatgtgacggagcccgattttcgaaaaaaaaaatttttg
ggctaatttgggccaaaaaacggctaaaaaacgggttttttagactttgt
gaaaaattgggtcattaattttttctgattttttgtatgaaggtagggta
ccatcataggtaaaagatggctcgagcagatttttgcaaaaaaattttgt
tggctcaaaaaacgcatgtttatctataagaatcacNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaattttttaataa
gaaagatgtttttttttgctcacgaagtcctgaatatgaaagattatttc
aagagcatgaaattttggtttctagacgtttttttttataagaaacaaac
gactaattttagtagatcgtcactatttctgttctgaatgattgtttaac
agtCATgttcacgtagatatcaattatatttgttaaatgcataaccaggt
aggtccataaaagtatcccTTGTTTCACTTATGACTACGTAAACTCAATG
TGAATTGCCTGTTCGAACAAGTCGTCTAAATACGGCATGGAAAATATGCC
TGCCTAATTTACAGTGGATCACTCATTAGCATAACATAACCTTCAAACAT
ACCCTGGCAATTTCAAGATTTATCAAGTAGAATCAAGTTAAAAGTACTAT
TTTGGAGTTGTTCAATTTAGGCTGTTCATTAACCCACACGGTGGTATTGA
GTTGGATAAGCAGGGTCGTCGAAAGAAAAGGTGGCAGTGGTTTTACAGCA
AAGGTCAGTCGCAAGCACCGGCTTTCCAACCTATTTGTATTCAGCTCAAC
AAATATTTGTCACTTCGCTTGCTTAACCAGGTGAGTTGTTTCGTTCACTC
TTtgttttttcaggattttcctttctttaaagaaattccCTTCCCCTTCg
atacaatttcttttttcaatctttcCTCTGAAATAAAATGCCTTAATTTT
CTTTTAGAACAATATGGCGTTGATTTTCTCTGCCCTCAAACGATCGATCA
GATTTAATGTTGGATCAAATCTAATGGTGAAAATACTTAATATTTGCACA
TTCTTATTGCTCTGAACAAAACGTGTCTAAACCGAACACATTATTTGAAT
AATATGATAAAAAACCACATGCATTCTTTCAGGTCTTTTCATAATAGTGC
CTTATCTACAGTTAGCTGCAACGAAATCATAATTCCTTTTTGTTGCGATC
AGCTACTTTCAAGACTCTCCAATTTGATGATTGTTACTTTTACTCTCCCA
GGCACATGGTCTTGAGGGGCATGGTACTTTCGCATGCGATTCATCAGAAC
ATTATTTATCGGACAAGAAGAAGGAACTGAGGTAAGGCATTTTGATTGAT
CTAGATTTAAATTCGAAATCTAaaattgcttgttttttatcGTTTCTTTC
TACAAGTTATTCTAAGTTTGATTTACTATTTCCAGTTGCATTCTTTTTCA
TGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAAT
AATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTA
TTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCA
TTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCA
TGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAAT
AATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTA
TTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCA
TTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCA
TGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAAT
AATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTA
TTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCA
TTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCA
TGGCACGAATAATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAAT
AATATATCTATTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTA
TTCGCTTGCATTCTTTTTCATGGCACGAATAATATATCTATTCGCTTGCA
TTCTTTACTTTTAGTGCACTTCTGAGGGAAATACAAAATACCTTACGTTT
TTCGAAGCATGCGGTTGTGAAATCTAAATTACTGAGGCGAGAGTTCTCTT
CTAGTGAGTCGCTACCTCCTATAACGTCCAGAAGCACAGATTCGGTGTAC
GTTGACTAAATTCTCACTATTAATATGTTCTTCGTTCGTTCGTCGCAGTG
AATTTGAACGAATCTCCAATCCCAGTCAAATTGTAACACAACTTTTAATT
AGATTAAAAGCATACCAATATTGTAACGTAAGTTATCTATCAATAATAAT
CCAGTGTCTAAACTAGTTTCTCGAAAAAAGTGTATGAAGTTTGAGATTCA
GAGAGACTTAAAAGTATTTTAACACGCGTTTTAGAAATCacgctaaattt
tgaaaattgatatataatgttaaattttgaaaattttgtttaaataatAT
TCAAATCAATGAGCGTGATTTCTAAAACTCGTGTTAAAATGCTTCCACCT
GAAGGCATGACAAATAAAGCGAATAGGAGTATAGAAACTCTTGAAAGGTT
TTTATTTAACACTAAGAAATTAGTTTTAGAAAGTTTGACCTTGTATTATA
TCATACTgtataattttgtttgaaaatgtgtaaatattttaaataattta
ataTCAAATTGTAAGTATGCGTGCTAGAAAGTATATTTTAAGTAGTCATT
TATTTTTATGGGATGTGTATATGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032169XLOC_032169Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050787-exon-scaffold_187-1491911889:37066..39172TCONS_00050787-exon-scaffold_187-1491911889:37066..39172Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:37066..39172TCONS_00050787-exon-scaffold_187-1510915933:37066..39172Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:37066..39172TCONS_00050787-exon-scaffold_187-1575043694:37066..39172Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:39330..39865TCONS_00050787-exon-scaffold_187-1491911889:39330..39865Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:39330..39865TCONS_00050787-exon-scaffold_187-1510915933:39330..39865Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:39330..39865TCONS_00050787-exon-scaffold_187-1575043694:39330..39865Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:39987..40159TCONS_00050787-exon-scaffold_187-1491911889:39987..40159Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:39987..40159TCONS_00050787-exon-scaffold_187-1510915933:39987..40159Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:39987..40159TCONS_00050787-exon-scaffold_187-1575043694:39987..40159Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:40334..40392TCONS_00050787-exon-scaffold_187-1491911889:40334..40392Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:40334..40392TCONS_00050787-exon-scaffold_187-1510915933:40334..40392Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:40334..40392TCONS_00050787-exon-scaffold_187-1575043694:40334..40392Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:40547..40698TCONS_00050787-exon-scaffold_187-1491911889:40547..40698Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:40547..40698TCONS_00050787-exon-scaffold_187-1510915933:40547..40698Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:40547..40698TCONS_00050787-exon-scaffold_187-1575043694:40547..40698Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:41182..41264TCONS_00050787-exon-scaffold_187-1491911889:41182..41264Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:41182..41264TCONS_00050787-exon-scaffold_187-1510915933:41182..41264Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:41182..41264TCONS_00050787-exon-scaffold_187-1575043694:41182..41264Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:41457..41529TCONS_00050787-exon-scaffold_187-1491911889:41457..41529Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:41457..41529TCONS_00050787-exon-scaffold_187-1510915933:41457..41529Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:41457..41529TCONS_00050787-exon-scaffold_187-1575043694:41457..41529Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:41760..41857TCONS_00050787-exon-scaffold_187-1491911889:41760..41857Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:41760..41857TCONS_00050787-exon-scaffold_187-1510915933:41760..41857Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:41760..41857TCONS_00050787-exon-scaffold_187-1575043694:41760..41857Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:43586..43745TCONS_00050787-exon-scaffold_187-1491911889:43586..43745Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:43586..43745TCONS_00050787-exon-scaffold_187-1510915933:43586..43745Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:43586..43745TCONS_00050787-exon-scaffold_187-1575043694:43586..43745Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:43873..43941TCONS_00050787-exon-scaffold_187-1491911889:43873..43941Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:43873..43941TCONS_00050787-exon-scaffold_187-1510915933:43873..43941Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:43873..43941TCONS_00050787-exon-scaffold_187-1575043694:43873..43941Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:44167..44246TCONS_00050787-exon-scaffold_187-1491911889:44167..44246Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:44167..44246TCONS_00050787-exon-scaffold_187-1510915933:44167..44246Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:44167..44246TCONS_00050787-exon-scaffold_187-1575043694:44167..44246Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1491911889:45130..45840TCONS_00050787-exon-scaffold_187-1491911889:45130..45840Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1510915933:45130..45840TCONS_00050787-exon-scaffold_187-1510915933:45130..45840Clytia hemisphaericaexon
TCONS_00050787-exon-scaffold_187-1575043694:45130..45840TCONS_00050787-exon-scaffold_187-1575043694:45130..45840Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_187supercontigscaffold_187:37066..45840 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.42327	1.42802	1.65502	1.36745	3.84884	2.74998	3.05588	3.49711	2.3683	2.83025	3.24198	3.1099	2.95014	3.25637	1.26883	1.346	1.10509	1.78488	1.80055	2.19581	2.74761	3.14729	0.485834	0.902108	6.48151	4.55996	3.02726	2.38997	1.15617	1.39559
Blast
[Close]
BLAST of TCONS_00050787 vs. Swiss-Prot (Human)
Match: ERIP6 (Glutamate-rich protein 6 OS=Homo sapiens GN=ERICH6 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.402e-25
Identity = 86/318 (27.04%), Postives = 160/318 (50.31%), Query Frame = 1 
Query: 2575 CQFCGKPIMTV-PPXXXXXXXXXXXXCCPEYKHFIK-LHLQSVKDLADDGNEEEAELIDINPHAPYGNNKQSRKAPRDXXXXXXXXXXXXXXXVATQANI-FSF--ARQMKTIQYSLASTKCMAEGWTVNPKPPVEQSSNRDEEIFQVE--VNSTLLQRSEVLHTRLYENGKRFLTIFPDGTGCCYYPNGNVAVMITSTEKEKYTYIVQSNEKYDDLEDSGLLAIFEPSGNAICYYEINQKIRLFINPHGGIELDKQGRRKKRWQWFYSKGQSQAPAFQPICIQLNKYLSLRLLNQNNMALIFSALKRSIRFNVGSNL 3507
            C+FCG  +      ++   E      CC  +++ I  ++ + +K         +AELI I+PHA +G+     KA    +  +  +R      + ++    FS   ++++KTI Y L+    + E   ++      Q  N +  I   +  +    + R+E+L  + Y++G +FLT FPDGT   +YP+GN+A++    +   +T IVQ     D   +  +LA+ + SG + CY+  N  + ++IN  GG   D+ G R + W W  S   S   +F+P+ + LN+Y+ +R+L Q+ +++ F A+ +  R +VG+ +
Sbjct:  271 CEFCGSDLRAFFSNVDVSSEPKGHASCCIAFQNLIDYIYEEQIK-----TKPPKAELIAIDPHAAHGSEVDRLKAKEKALQRKQEQRMARHFAIISREQTHFSEDDSKRLKTISYQLSVD--IPEKQIIDDIVFDFQLRNSNMSIICCDSRIACGKVVRNELLE-KHYKHGSKFLTSFPDGTTQIFYPSGNLAIIRVPNKVNGFTCIVQE----DMPTNPAILAVLDSSGRSSCYHP-NGNVWVYINILGGQYSDQAGNRIRAWNWSNSITSSPFVSFKPVFLALNRYIGVRILEQDKISITFLAMGQQARISVGTKV 575
The following BLAST results are available for this feature:
BLAST of TCONS_00050787 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERIP64.402e-2527.04Glutamate-rich protein 6 OS=Homo sapiens GN=ERICH6... [more]
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