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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050772 ID=TCONS_00050772|Name=TCONS_00050772|organism=Clytia hemisphaerica|type=transcript|length=948bp
ATTTACAAGGACATTCTGAGAAGAAGTAATTAAGAAACTTGAAAATAAAG
GGGGGGATGAACTAGTGTAGTATAGACCTGGTTGGTCTTGTTATCTTATT
TCATGACTGCAAaggaatatattttttatgttcAGACCTTGAATAGTTGG
AGTTACTAGGGTTACTTAATGTGTAAAAATGGATATTTTCTGCCACGATT
GGAAAGTAAAGAAACTGTTTGTCTGGTCCTTTATTCATACCACACACTGT
TGATGTTGGTCCAACTTTTTAAGCATGTCTTCTTCACTTTAGAAAAAACA
CACATTTTGGTCTGAACTGTCTCAACCTTTTATTGTTATGATCCCTTATT
tcattaaaacaatttttaagaGAACAAGACCTCTGAagtttggttgaaaa
attagaaCAAATTTAAGAACGATTAGAACctcagattttgaaaatgttgt
tttAAGAAATTTGAATCTTTAAGAcgagaaaaattaagaatttcaaGAAG
GGTCGAGTGGATGTAAAATTCATTCGTTCTTGTAAGCAAGTCTAAACTGT
CTTGTCTTATTGTTATAAGCCTATACATTTAATAACACTGCCGCAGGGTG
TTGTTTGCGGACCAATTCaaccattttgggaattttatattttcatttaa
aCACGTTTCTAcaaaacgaggctaaacttGTGGTTGCTATGCTTTTGAGT
TTAGAACCGCCCTATATTGACAGAGGTTACACAAATAGAGGTTCCActtg
aaatttaacatttttatttaGGCAGCTGTAGGATTTTCTactctaaaaat
ttctttactAAAATTTCAAGTATTTTTCGAACTAATATTTATATaaactt
ttgaactttttaaaagattttattttcgaatttttggactaaaatataca
atatcatgtttttgaagaatattaaaattattcaagggaaaaatcttc Run BLAST on NCBI transcript from alignment at scaffold_185:225205..226152 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050772 ID=TCONS_00050772|Name=TCONS_00050772|organism=Clytia hemisphaerica|type=transcript|length=948bp|location=Sequence derived from alignment at scaffold_185:225205..226152 (Clytia hemisphaerica)
gaagatttttcccttgaataattttaatattcttcaaaaacatgatattg
tatattttagtccaaaaattcgaaaataaaatcttttaaaaagttcaaaa
gtttATATAAATATTAGTTCGAAAAATACTTGAAATTTTagtaaagaaat
ttttagagtAGAAAATCCTACAGCTGCCtaaataaaaatgttaaatttca
agTGGAACCTCTATTTGTGTAACCTCTGTCAATATAGGGCGGTTCTAAAC
TCAAAAGCATAGCAACCACaagtttagcctcgttttgTAGAAACGTGttt
aaatgaaaatataaaattcccaaaatggttGAATTGGTCCGCAAACAACA
CCCTGCGGCAGTGTTATTAAATGTATAGGCTTATAACAATAAGACAAGAC
AGTTTAGACTTGCTTACAAGAACGAATGAATTTTACATCCACTCGACCCT
TCttgaaattcttaatttttctcgTCTTAAAGATTCAAATTTCTTaaaac
aacattttcaaaatctgagGTTCTAATCGTTCTTAAATTTGttctaattt
ttcaaccaaactTCAGAGGTCTTGTTCtcttaaaaattgttttaatgaAA
TAAGGGATCATAACAATAAAAGGTTGAGACAGTTCAGACCAAAATGTGTG
TTTTTTCTAAAGTGAAGAAGACATGCTTAAAAAGTTGGACCAACATCAAC
AGTGTGTGGTATGAATAAAGGACCAGACAAACAGTTTCTTTACTTTCCAA
TCGTGGCAGAAAATATCCATTTTTACACATTAAGTAACCCTAGTAACTCC
AACTATTCAAGGTCTgaacataaaaaatatattcctTTGCAGTCATGAAA
TAAGATAACAAGACCAACCAGGTCTATACTACACTAGTTCATCCCCCCCT
TTATTTTCAAGTTTCTTAATTACTTCTTCTCAGAATGTCCTTGTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050772-exon-scaffold_185-1491911889:225205..226152 | TCONS_00050772-exon-scaffold_185-1491911889:225205..226152 | Clytia hemisphaerica | exon |
| TCONS_00050772-exon-scaffold_185-1510915933:225205..226152 | TCONS_00050772-exon-scaffold_185-1510915933:225205..226152 | Clytia hemisphaerica | exon |
| TCONS_00050772-exon-scaffold_185-1575043694:225205..226152 | TCONS_00050772-exon-scaffold_185-1575043694:225205..226152 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_185 | supercontig | scaffold_185:225205..226152 . |
Blast
The following BLAST results are available for this feature:
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