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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050768 ID=TCONS_00050768|Name=TCONS_00050768|organism=Clytia hemisphaerica|type=transcript|length=903bp
CGAACATAATGCAGCAGGATTGCGCCGAGATGAAAATCATCAAGCTGCTG
TGTCTTCTATTGGAGGAgaaaaaacacaacaaaatctcaaagaagaactt
gaaagtttgaagaaagacagagaaattgaaaaactaaaatttgaaaaaga
aattgaaacccTGAAAGCAGTAATCGAgaaattgaaacttgaaaatacaa
tggaaaaatTGAAATCTGAAAATACTTTCTTGAAAGCTGAAAAACAATTT
GGCATCGACTTGAAAGCAATTTCAGATGACAAGCAGAATATCGAAGAAGA
GTTGAAATCTGCTAAGATTGAAAACGCGAAATTTCgacaacaaaatgaaa
atctcaTCGAGGAAAATAAGAGATTTGAGGAGAATTTAAAGGAGGTTGAA
GCTGAGAACCAGAATTTCATTCAAGAAAACACAACTTTGAAAGCAAATGA
AGCTAAGATTACAGATGAGCTAAAAACTTTGAAGATGGAGAAAACTCAAA
TGTTAGATAGTATccaaaaattgaaggaaaaaaacaaaaaaaaagaaaac
aaaggtGCTCGGaaaaaacagtttcaaaaaGCAGAGGTCTTGAAAACAGC
AGAGAAAAACGAGGTCAATAAAGATGAAGAGCCCGACTATAGCCGAATGC
CGCTTGAAGAATCAATTCTTTCCGGTTCTTACATGATCTTCGAGGAGGAG
TTTTACCCTGGTTACGAAAACTGGTATACCAATATGTATAAAAGATCAAA
TTTTTATGTAACATTCAAAAATTGTAGAGTTCATATTAAACActtcatca
aaacaaacatttatATTAACATAGAATGGACTTTTGACAACTTGAAGTGT
GCCAAACTTCTGCATCCAAAAGATaatagaaaatcaaaagatCTTGATCA
TAT Run BLAST on NCBI transcript from alignment at scaffold_185:129273..130175 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050768 ID=TCONS_00050768|Name=TCONS_00050768|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at scaffold_185:129273..130175 (Clytia hemisphaerica)
ATATGATCAAGatcttttgattttctattATCTTTTGGATGCAGAAGTTT
GGCACACTTCAAGTTGTCAAAAGTCCATTCTATGTTAATataaatgtttg
ttttgatgaagTGTTTAATATGAACTCTACAATTTTTGAATGTTACATAA
AAATTTGATCTTTTATACATATTGGTATACCAGTTTTCGTAACCAGGGTA
AAACTCCTCCTCGAAGATCATGTAAGAACCGGAAAGAATTGATTCTTCAA
GCGGCATTCGGCTATAGTCGGGCTCTTCATCTTTATTGACCTCGTTTTTC
TCTGCTGTTTTCAAGACCTCTGCtttttgaaactgttttttCCGAGCacc
tttgttttctttttttttgtttttttccttcaatttttggATACTATCTA
ACATTTGAGTTTTCTCCATCTTCAAAGTTTTTAGCTCATCTGTAATCTTA
GCTTCATTTGCTTTCAAAGTTGTGTTTTCTTGAATGAAATTCTGGTTCTC
AGCTTCAACCTCCTTTAAATTCTCCTCAAATCTCTTATTTTCCTCGAtga
gattttcattttgttgtcGAAATTTCGCGTTTTCAATCTTAGCAGATTTC
AACTCTTCTTCGATATTCTGCTTGTCATCTGAAATTGCTTTCAAGTCGAT
GCCAAATTGTTTTTCAGCTTTCAAGAAAGTATTTTCAGATTTCAattttt
ccattgtattttcaagtttcaatttcTCGATTACTGCTTTCAgggtttca
atttctttttcaaattttagtttttcaatttctctgtctttcttcaaact
ttcaagttcttctttgagattttgttgtgttttttcTCCTCCAATAGAAG
ACACAGCAGCTTGATGATTTTCATCTCGGCGCAATCCTGCTGCATTATGT
TCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050768-exon-scaffold_185-1491911889:129273..130175 | TCONS_00050768-exon-scaffold_185-1491911889:129273..130175 | Clytia hemisphaerica | exon |
| TCONS_00050768-exon-scaffold_185-1510915933:129273..130175 | TCONS_00050768-exon-scaffold_185-1510915933:129273..130175 | Clytia hemisphaerica | exon |
| TCONS_00050768-exon-scaffold_185-1575043694:129273..130175 | TCONS_00050768-exon-scaffold_185-1575043694:129273..130175 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_185 | supercontig | scaffold_185:129273..130175 . |
Blast
The following BLAST results are available for this feature:
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