TCONS_00050571 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050571
Unique NameTCONS_00050571
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050571 ID=TCONS_00050571|Name=TCONS_00050571|organism=Clytia hemisphaerica|type=transcript|length=156bp
GTATATTTGTCCTCATCAGTTGTTAGCCGCCAGGCCCAATGTCAAATATA
CTggacatttcttttttgcccagttttttttttgtgcagCTGCTCAATTC
ATTCTAGAAAAACATTTCGCAATCATTGAAAATACacaggaaaaaatcag
cAGATC
Run BLAST on NCBI

transcript from alignment at scaffold_179:36364..36519

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050571 ID=TCONS_00050571|Name=TCONS_00050571|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at scaffold_179:36364..36519 (Clytia hemisphaerica)
GATCTgctgattttttcctgtGTATTTTCAATGATTGCGAAATGTTTTTC
TAGAATGAATTGAGCAGctgcacaaaaaaaaaactgggcaaaaaagaaat
gtccAGTATATTTGACATTGGGCCTGGCGGCTAACAACTGATGAGGACAA
ATATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032025XLOC_032025Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050571-exon-scaffold_179-1491911889:36364..36519TCONS_00050571-exon-scaffold_179-1491911889:36364..36519Clytia hemisphaericaexon
TCONS_00050571-exon-scaffold_179-1510915933:36364..36519TCONS_00050571-exon-scaffold_179-1510915933:36364..36519Clytia hemisphaericaexon
TCONS_00050571-exon-scaffold_179-1575043694:36364..36519TCONS_00050571-exon-scaffold_179-1575043694:36364..36519Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:36364..36519 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050571 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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