TCONS_00050515 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050515
Unique NameTCONS_00050515
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2930

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050515 ID=TCONS_00050515|Name=TCONS_00050515|organism=Clytia hemisphaerica|type=transcript|length=2930bp
TTATAGACCAAATAATTAAATCattcaaacaaaaataatattgaaattaC
ACAGTCGTATAGTCCGATTGAATCATGGCATCAGCGAACAACGAGCCAAG
CAGTTCATTGGGTATTGCAAACAAAGCCACCAATGTGGTCTTTCAAAAAG
GTCACGTGACACGCAAGAAACGTGGACAAGTGTTGGGTCAGTCACATGGT
TTTAGGGGATGTACTATTTGGTTTACAGGTTTATCGGGAGCTGGAAAGAC
AACTATCAGTTTCGCACTAGAAGAATATTTATGTTTAAGGGGAATTCCAA
CCTATGGTCTGGATGGGGATAACATGAGAACTGGTCTCAATAAAAATTTA
GGGTTTTCCCCTGAAGACCGTGAAGAAAATATCCGTCGTGTCGGGGAAGT
TGCTAAATTATTTGCCGACGCTGGTATAGTTTGTTTGTCCAGTTTTATTT
CACCTTACGAAAAAGATCGTTTGAAAGCACGTAAATTGCATGAAGAAGCT
GGCCTCCCGTTCTTCGAGTGCTACGTCGATACGCCGTTAAACGTATGCGA
GACGCGCGACGTGAAAGGTCTGTATAAGAAGGCCAGAGACGGCGTCATTA
AAGGATTTACCGGTATCGATTCACCGTATCAAGCACCGAGCAATCCAGAG
CTTGTTTTGAAAGCTGGccaacaaagcattgatgaatGCGTCCAAGAGAT
TGTGAAATTACTGGAGAAGAATCACATTGTACCTCTCACAGTCATCAACG
AAGTCCGTGAACTCTTTGTCAATGATGACGAGTTACACGAACAAAAAGTG
ATCGCTGAATCATTACCCAGTCTCCCTATCAATAAAGTTGACATGCAATG
GCTTCAGGTGTTAGCTGAAGGTTGGGCGTCACCCTTGGAAGGGTTTATGT
ATGAGCGCGAATATCTACAGACGCTTCATTTCAATTGTTTACAAGATTCA
GATAATATCAATCAATCAGTTCCCATTGTATTACCTGTCACTACTGAACT
AAAAGAATCACTGGAGAATAAAGGAGAAATCGCACTTGAATATGACGGTC
GTCGTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCACATCGTAAAGAG
GAGAGATGTTGTCGACAATTCGGTACACGAAGCGTGAAACAACCTcatat
tgaaatgattttaGCTGCAGGTGATTGGTGTGTTGGTGGCAAATTACGTG
TCTTAGGTAAAATTGAATGGAACGATGGTCTTGATGAATATCGATTGAAA
CCAAACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCGGATGCTGTGTT
CGCTTTCCAATTACGTAATCCTGTGCACAACGGACACGCCCTTTTGATGC
GAGACACCAAACGGAACTTGGTTGAACGTGGTTACAAAAAACCGGTCTTA
CTTTTACATCCTTTGGGTGGTTGGACTAAAAATGATGACGTACCTTTGCC
AATTCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGGTGTATTAGATC
CAGAGTCTACTGTCTTAGCTATCTTTCCGTCTCCAATGATGTATGCTGGC
CCAACAGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTAC
ATTCTACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAAC
CTGGGGATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCT
CCTGGTCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAA
TAAAGTAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaat
ttgaatttatttctgGTACTAAGATGAGAGCTTTTGCCAGAAATGGTGAT
ACTCCACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGA
TTATTACCAATCAATCGTCAAGAATGATTAAATTTTGTTTACAATCAATT
TCTTCActtattttttacaatttcttgttcatgttttgtttttgtttttt
tcatttttatcgtttttataaatttttcagtttgatgGCTAGATCTCTCA
TTTGGGTAGATGACGTCAAAGATAGGGATGGGCAATACTTCAGTCAGATA
TATATTACTGCTAAAGGTAATATTATCTGGACAAGGCTTTCTTTACGTTT
AGAAATGAAATTGGTGTATCCTGATTTTGCCTGTTTTTGACTGGGAGTAT
ACGGATTTTCAGAAATCCCCTAAAATCTTGCTTGGGATATTAACATCCTT
gcaagcatttttcagtatcctaagcatctccgagccttttttcaaatttt
tgtattcttattaaagaaataaaaacaaagacaattACTTCAAGATGGTG
TCGGTATTTAGAGACCAATCCCCCCTTGCCTTTGATGGTCCAGCTATTAA
GGTAAGATAAGGAAGAGCAAAGGTAACTCCATGCGCTCTACTCGAGGTAT
GACCCGGTTTCGTCTCTTTTAGGGAACATTCTTTTTGCATTAGTTTGGTC
TAACCTTCTCTTTTTATTTTGTACGTTTTTCATGGtaaaaaatttctatt
tattGACTGTATTTCCAGTTATTTGTTTATGCTTAATTTTTTTATACCTC
GATctatttcaaaaatgttgttaggaattttcaaatttttgtctcATTTA
AAATACGtgttttttcattaatttatcATTCTAATATGTATACCCTGGAG
ACAAtatcaaaaatgaattattaAGTGCAataaaatccaaatatattccA
GTCAGTATTTTATTTATTCTGTACAGACATGATTTCCACAGGAAATTCGA
ATTCTGAGTGGTAAAATTGCACTTTTTTAAGACTACGCTCATGAAACGTC
TTGGGTTTGTTATTGTGATTGTTATAAGAAACGCCAACTTTCGGCTCAAG
CTTTAAGTTGcctagcattctagctcattt
Run BLAST on NCBI

protein sequence of TCONS_00050515-protein

>TCONS_00050515-protein ID=TCONS_00050515-protein|Name=TCONS_00050515-protein|organism=Clytia hemisphaerica|type=polypeptide|length=618bp
MASANNEPSSSLGIANKATNVVFQKGHVTRKKRGQVLGQSHGFRGCTIWF
TGLSGAGKTTISFALEEYLCLRGIPTYGLDGDNMRTGLNKNLGFSPEDRE
ENIRRVGEVAKLFADAGIVCLSSFISPYEKDRLKARKLHEEAGLPFFECY
VDTPLNVCETRDVKGLYKKARDGVIKGFTGIDSPYQAPSNPELVLKAGQQ
SIDECVQEIVKLLEKNHIVPLTVINEVRELFVNDDELHEQKVIAESLPSL
PINKVDMQWLQVLAEGWASPLEGFMYEREYLQTLHFNCLQDSDNINQSVP
IVLPVTTELKESLENKGEIALEYDGRRVAILGETEFFPHRKEERCCRQFG
TRSVKQPHIEMILAAGDWCVGGKLRVLGKIEWNDGLDEYRLKPNQLRKKF
AEMKADAVFAFQLRNPVHNGHALLMRDTKRNLVERGYKKPVLLLHPLGGW
TKNDDVPLPIRIKQHLAVLKEGVLDPESTVLAIFPSPMMYAGPTEVQWHC
KARIAAGATFYIVGRDPAGMGHPDQPGDLYDATHGRKVLTMAPGLVQLEI
VPFKVAAYNKVKHQMTFFDPEKKEEFEFISGTKMRAFARNGDTPPDGFMA
PTAWKVLADYYQSIVKND
Run BLAST on NCBI

transcript from alignment at scaffold_179:251486..257015+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050515 ID=TCONS_00050515|Name=TCONS_00050515|organism=Clytia hemisphaerica|type=transcript|length=5530bp|location=Sequence derived from alignment at scaffold_179:251486..257015+ (Clytia hemisphaerica)
TTATAGACCAAATAATTAAATCattcaaacaaaaataatattgaaattaC
ACAGTCGTATAGTCCGATTGAATCATGGCATCAGCGAACAACGAGCCAAG
CAGTTCATTGGGTATTGCAAACAAAGCCACCAATGTGGTCTTTCAAAAAG
GTCACGTGACACGCAAGAAACGTGGACAAGTGTTGGGTCAGTCACATGGT
TTTAGGGGATGTACTATTTGGTTTACAGGTAAACAGTGATAATTCattta
tatatacttttaatCCATCAATCCTTTTGGattattaaatttcaattttt
cccgACTTCGGTTCGATTTGAAAtgtaaattttataagaattagcCTTTG
TTTTCTGATATTTTCAAAGGTTGTAGTTGAACACATCATTACGATTAACA
CACCTATCTCACCGACTTGATTGAACTTTGCAATTAAACTAATCCAATTC
CAAATTATTCGATCTCAGGTTCCAATCTTCGTCTTTTTATTCTTTCTATT
AAACTATCTGTCTATAGGTTTATCGGGAGCTGGAAAGACAACTATCAGTT
TCGCACTAGAAGAATATTTATGTTTAAGGGGAATTCCAACCTATGGTCTG
GATGGGGATAACATGAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCCC
TGAAGACCGTGAAGAAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTAT
TTGCCGACGCTGGTATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGAA
AAAGATCGTTTGAAAGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGTT
CTTCGAGTGCTACGTCGATACGCCGTTAAACGTATGCGAGACGCGCGACG
TGAAAGGTCTGTATAAGAAGGCCAGAGACGGCGTCATTAAAGGATTTACC
GGTATCGATTCACCGTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGAA
AGCTGGccaacaaagcattgatgaatGCGTCCAAGAGATTGTGAAATTAC
TGGAGAAGAATCACATTGTACCTCTCACAGTCATCAACGAAGTCCGTGAA
CTCTTTGTCAATGATGACGAGTTACACGAACAAAAAGTGATCGCTGAATC
ATTACCCAGTCTCCCTATCAATAAAGTTGACATGCAATGGCTTCAGGTGT
TAGCTGAAGGTTGGGCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGAA
TATCTACAGACGCTTCATTTCAATTGTTTACAAGATTCAGATAATATCAA
TCAATCAGTTCCCATTGTATTACCTGTCACTACTGAACTAAAAGAATCAC
TGGAGAATAAAGGTAAGCTTTTGttttacaatgaagtgaatacagtcgct
ctcatgttgtcttcgGACAACagaagtttgctcgctgtttttaatgattt
ttcgaaatttcgacgtggaaaaaaagtcagttttttggaaataactttcg
aactactttttcaaactttatgtatgatagctcaaaattcaagttagagc
atcctttatacaataaaaaaagaatgaacaaaaaatgaaaatcctgaacc
tcacaatatctcgacaaacctgtatacttttttttggtgcacccggtaca
cGAAGCGAATGTGTCCAATAAACTTGAAACAAGGTTATGTTTCAGCTTTT
GGTCTTTGCGCAAGCTGAGCCGAATGGTTTTACTAGACAACTTACTGTTT
AAATGTTGTTTTCCTTCTAACAGGAGAAATCGCACTTGAATATGACGGTC
GTCGTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCACATCGTAAAGAG
GAGAGATGTTGTCGACAATTCGGTACACGAAGCGTGAAACAACCTcatat
tgaaatgattttaGCTGCAGGTGATTGGTGTGTTGGTGGCAAATTACGTG
TCTTAGGTAAGTTGATTGATTTGTGGTGATTTTTAACTGGTTCTTGAATT
TTAGTCGAATATAATTACTAGGCTTTAAAACTTCTGTCGTAGTGACTCGG
CGGAAATTATTTAGCCCATAATGATAAAATCAAAGAGCTACTGATGGGAA
ATCGCTTTTATCGTTTTTAATTAGTGGGAACTTTGCACTATATACTGTCT
TATTAGCTTCCCAAAATTACAATGCCCTCCCCAATTGGGATGAAATTTAA
GTGACCTTTCTAAGGGGATCACATTTTTCTTACCATTGACAATCTTTTGA
gccatttttccagtgggggtGTTTAGAACATGTGCTTTATAACCTCAATT
GGTTGTTTATGGAGCagtctttcttttcttcttcttttgtaCGTTAAAGT
AATATATATGAGAAATACAGAAAttttaatattgaaaaattttttatgtt
ttttctttagGTAAAATTGAATGGAACGATGGTCTTGATGAATATCGATT
GAAACCAAACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCGGATGCTG
TGTTCGCTTTCCAATTACGTAATCCTGTGCACAACGGACACGCCCTTTTG
ATGCGAGACACCAAACGGAACTTGGTTGAACGTGGTTACAAAAAACCGGT
CTTACTTTTACATCCTTTGGGTGGTTGGACTAAAAATGATGACGTACCTT
TGCCAATTCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGGTGTATTA
GATCCAGAGTCTACTGTCTTAGGTAGGTGGCCTCTTATTGTCAGCCAACT
GAGTTAAAGCTGCATGATtagatattttgatatttctccATCACAGCGTT
TATATACCCAAAGAATTTTGAAGAAATCTCAAGAGCTTCTAATGATTTCA
GTGGTGTggttatttgttttgtttttttcactcTAATGTGTAAAAAACTC
CAAAACTCTGTTTCATCGTTAATGCATGTCTCAGAGGTCTTTTAACCAGA
TTTCAATCTATTTAATCTTAACTTGTTACTTACCTGCTTACTTTCCCTTT
TATCTATAtccttataaaaagcgtgtacataTACTTCATAGTCATAGTGT
AATCTGTGATGTGATTAGTCTAAATTCGATCTTGGGAATTTACTCTGTAT
GGTTTTCTGCTGCCCAGAATTAATGACTAGTTTATTAAATCCTCTTTTAA
TTTCATATTTCAGCTATCTTTCCGTCTCCAATGATGTATGCTGGCCCAAC
AGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTACATTCT
ACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAACCTGGG
GATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCTCCTGG
TCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAATAAAG
TAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaatttgaa
tttatttctgGTACTAAGATGAGAGCTTTTGCCAGGAATGGTGATACTCC
ACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGATTATT
ACCAATCAATCGTCAAGAATGATTAAATTTTGTTTACAATCAATTTCTTC
Acttattttttacaatttcttgttcatgttttgtttttgtttttttcatt
tttatccattttataaattttttcagTTTGATGGCTAGATCTCTCATTTG
GGTAGATGACGTCAAAGATAGGGATGTGCAATACTTCAGTCAGATATATA
TTACTGCTGAAGGTAATATTATCTGGACAAGGCTTTCTTNCTCCATCACA
GCGTTTATATACCCAAAGAATTTTGAAGAAATCTCAAGAGCTTCTAATGA
TTTCAGTGGTGTggttatttgttttgtttttttcactcTAATGTGTAAAA
AACTCCAAAACTCTGTTTCATCGTTAATGCATGTCTCAGAGGTCTTTTAA
CCAGATTTCAATCTATTTAATCTTAACTTGTTACTTACCTGCTTACTTTC
CCTTTTATCTATAtccttataaaaagcgtgtacataTACTTCATAGTCAT
AGTGTAATCTGTGATGTGATTAGTCTAAATTCGATCTTGGGAATTTACTC
TGTATGGTTTTCTGCTGCCCAGAATTAATGACTAGTTTATTAAATCCTCT
TTTAATTTCATATTTCAGCTATCTTTCCGTCTCCAATGATGTATGCTGGC
CCAACAGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTAC
ATTCTACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAAC
CTGGGGATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCT
CCTGGTCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAA
TAAAGTAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaat
ttgaatttatttctgGTACTAAGATGAGAGCTTTTGCCAGAAATGGTGAT
ACTCCACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGA
TTATTACCAATCAATCGTCAAGAATGATTAAATTTTGTTTACAATCAATT
TCTTCActtattttttacaatttcttgttcatgttttgtttttgtttttt
tcatttttatcgtttttataaatttttcagtttgatgGCTAGATCTCTCA
TTTGGGTAGATGACGTCAAAGATAGGGATGGGCAATACTTCAGTCAGATA
TATATTACTGCTAAAGGTAATATTATCTGGACAAGGCTTTCTTTACGTTT
AGAAATGAAATTGGTGTATCCTGATTTTGCCTGTTTTTGACTGGGAGTAT
ACGGATTTTCAGAAATCCCCTAAAATCTTGCTTGGGATATTAACATCCTT
gcaagcatttttcagtatcctaagcatctccgagccttttttcaaatttt
tgtattcttattaaagaaataaaaacaaagacaattACTTCAAGATGGTG
TCGGTATTTAGAGACCAATCCCCCCTTGCCTTTGATGGTCCAGCTATTAA
GGTAAGATAAGGAAGAGCAAAGGTAACTCCATGCGCTCTACTCGAGGTAT
GACCCGGTTTCGTCTCTTTTAGGGAACATTCTTTTTGCATTAGTTTGGTC
TAACCTTCTCTTTTTATTTTGTACGTTTTTCATGGtaaaaaatttctatt
tattGACTGTATTTCCAGTTATTTGTTTATGCTTAATTTTTTTATACCTC
GATctatttcaaaaatgttgttaggaattttcaaatttttgtctcATTTA
AAATACGtgttttttcattaatttatcATTCTAATATGTATACCCTGGAG
ACAAtatcaaaaatgaattattaAGTGCAataaaatccaaatatattccA
GTCAGTATTTTATTTATTCTGTACAGACATGATTTCCACAGGAAATTCGA
ATTCTGAGTGGTAAAATTGCACTTTTTTAAGACTACGCTCATGAAACGTC
TTGGGTTTGTTATTGTGATTGTTATAAGAAACGCCAACTTTCGGCTCAAG
CTTTAAGTTGcctagcattctagctcattt

Coding sequence (CDS) from alignment at scaffold_179:251486..257015+

>TCONS_00050515 ID=TCONS_00050515|Name=TCONS_00050515|organism=Clytia hemisphaerica|type=CDS|length=11142bp|location=Sequence derived from alignment at scaffold_179:251486..257015+ (Clytia hemisphaerica)
ATGGCATCAGCGAACAACGAGCCAAGCAGTTCATTGGGTATTGCAAACAA
AGCCACCAATGTGGTCTTTCAAAAAGGTCACGTGACACGCAAGAAACGTG
GACAAGTGTTGGGTCAGTCACATGGTTTTAGGGGATGTACTATTTGGTTT
ACAGGTTTATCGGGAGCTGGAAAGACAACTATCAGTTTCGCACTAGAAGA
ATATTTATGTTTAAGGGGAATTCCAACCTATGGTCTGGATGGGGATAACA
TGAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCCCTGAAGACCGTGAA
GAAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTATTTGCCGACGCTGG
TATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGAAAAAGATCGTTTGA
AAGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGTTCTTCGAGTGCTAC
GTCGATACGCCGTTAAACGTATGCGAGACGCGCGACGTGAAAGGTCTGTA
TAAGAAGGCCAGAGACGGCGTCATTAAAGGATTTACCGGTATCGATTCAC
CGTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGAAAGCTGGccaacaa
agcattgatgaatGCGTCCAAGAGATTGTGAAATTACTGGAGAAGAATCA
CATTGTACCTCTCACAGTCATCAACGAAGTCCGTGAACTCTTTGTCAATG
ATGACGAGTTACACGAACAAAAAGTGATCGCTGAATCATTACCCAGTCTC
CCTATCAATAAAGTTGACATGCAATGGCTTCAGGTGTTAGCTGAAGGTTG
GGCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGAATATCTACAGACGC
TTCATTTCAATTGTTTACAAGATTCAGATAATATCAATCAATCAGTTCCC
ATTGTATTACCTGTCACTACTGAACTAAAAGAATCACTGGAGAATAAAGG
AGAAATCGCACTTGAATATGACGGTCGTCGTGTAGCCATCCTCGGTGAAA
CAGAGTTCTTCCCACATCGTAAAGAGGAGAGATGTTGTCGACAATTCGGT
ACACGAAGCGTGAAACAACCTcatattgaaatgattttaGCTGCAGGTGA
TTGGTGTGTTGGTGGCAAATTACGTGTCTTAGGTAAAATTGAATGGAACG
ATGGTCTTGATGAATATCGATTGAAACCAAACCAACTTCGCAAGAAATTT
GCTGAAATGAAGGCGGATGCTGTGTTCGCTTTCCAATTACGTAATCCTGT
GCACAACGGACACGCCCTTTTGATGCGAGACACCAAACGGAACTTGGTTG
AACGTGGTTACAAAAAACCGGTCTTACTTTTACATCCTTTGGGTGGTTGG
ACTAAAAATGATGACGTACCTTTGCCAATTCGTATTAAGCAGCATTTGGC
GGTCTTGAAAGAAGGTGTATTAGATCCAGAGTCTACTGTCTTAGCTATCT
TTCCGTCTCCAATGATGTATGCTGGCCCAACAGAAGTCCAATGGCATTGC
AAAGCACGAATTGCCGCAGGAGCTACATTCTACATTGTTGGTCGTGATCC
AGCCGGTATGGGACATCCTGACCAACCTGGGGATCTGTACGATGCCACAC
ACGGACGTAAGGTCCTCACCATGGCTCCTGGTCTCGTTCAGTTAGAGATT
GTTCCTTTCAAAGTTGCTGCTTACAATAAAGTAAAACATCAAATGACATT
TTTTGATCCAGAAAAGAAGGaagaatttgaatttatttctgGTACTAAGA
TGAGAGCTTTTGCCAGAAATGGTGATACTCCACCAGATGGCTTCATGGCA
CCTACCGCTTGGAAAGTGTTAGCCGATTATTACCAATCAATCGTCAAGAA
TGATTAAATGGCATCAGCGAACAACGAGCCAAGCAGTTCATTGGGTATTG
CAAACAAAGCCACCAATGTGGTCTTTCAAAAAGGTCACGTGACACGCAAG
AAACGTGGACAAGTGTTGGGTCAGTCACATGGTTTTAGGGGATGTACTAT
TTGGTTTACAGGTTTATCGGGAGCTGGAAAGACAACTATCAGTTTCGCAC
TAGAAGAATATTTATGTTTAAGGGGAATTCCAACCTATGGTCTGGATGGG
GATAACATGAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCCCTGAAGA
CCGTGAAGAAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTATTTGCCG
ACGCTGGTATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGAAAAAGAT
CGTTTGAAAGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGTTCTTCGA
GTGCTACGTCGATACGCCGTTAAACGTATGCGAGACGCGCGACGTGAAAG
GTCTGTATAAGAAGGCCAGAGACGGCGTCATTAAAGGATTTACCGGTATC
GATTCACCGTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGAAAGCTGG
ccaacaaagcattgatgaatGCGTCCAAGAGATTGTGAAATTACTGGAGA
AGAATCACATTGTACCTCTCACAGTCATCAACGAAGTCCGTGAACTCTTT
GTCAATGATGACGAGTTACACGAACAAAAAGTGATCGCTGAATCATTACC
CAGTCTCCCTATCAATAAAGTTGACATGCAATGGCTTCAGGTGTTAGCTG
AAGGTTGGGCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGAATATCTA
CAGACGCTTCATTTCAATTGTTTACAAGATTCAGATAATATCAATCAATC
AGTTCCCATTGTATTACCTGTCACTACTGAACTAAAAGAATCACTGGAGA
ATAAAGGAGAAATCGCACTTGAATATGACGGTCGTCGTGTAGCCATCCTC
GGTGAAACAGAGTTCTTCCCACATCGTAAAGAGGAGAGATGTTGTCGACA
ATTCGGTACACGAAGCGTGAAACAACCTcatattgaaatgattttaGCTG
CAGGTGATTGGTGTGTTGGTGGCAAATTACGTGTCTTAGGTAAAATTGAA
TGGAACGATGGTCTTGATGAATATCGATTGAAACCAAACCAACTTCGCAA
GAAATTTGCTGAAATGAAGGCGGATGCTGTGTTCGCTTTCCAATTACGTA
ATCCTGTGCACAACGGACACGCCCTTTTGATGCGAGACACCAAACGGAAC
TTGGTTGAACGTGGTTACAAAAAACCGGTCTTACTTTTACATCCTTTGGG
TGGTTGGACTAAAAATGATGACGTACCTTTGCCAATTCGTATTAAGCAGC
ATTTGGCGGTCTTGAAAGAAGGTGTATTAGATCCAGAGTCTACTGTCTTA
GCTATCTTTCCGTCTCCAATGATGTATGCTGGCCCAACAGAAGTCCAATG
GCATTGCAAAGCACGAATTGCCGCAGGAGCTACATTCTACATTGTTGGTC
GTGATCCAGCCGGTATGGGACATCCTGACCAACCTGGGGATCTGTACGAT
GCCACACACGGACGTAAGGTCCTCACCATGGCTCCTGGTCTCGTTCAGTT
AGAGATTGTTCCTTTCAAAGTTGCTGCTTACAATAAAGTAAAACATCAAA
TGACATTTTTTGATCCAGAAAAGAAGGaagaatttgaatttatttctgGT
ACTAAGATGAGAGCTTTTGCCAGAAATGGTGATACTCCACCAGATGGCTT
CATGGCACCTACCGCTTGGAAAGTGTTAGCCGATTATTACCAATCAATCG
TCAAGAATGATTAAATGGCATCAGCGAACAACGAGCCAAGCAGTTCATTG
GGTATTGCAAACAAAGCCACCAATGTGGTCTTTCAAAAAGGTCACGTGAC
ACGCAAGAAACGTGGACAAGTGTTGGGTCAGTCACATGGTTTTAGGGGAT
GTACTATTTGGTTTACAGGTTTATCGGGAGCTGGAAAGACAACTATCAGT
TTCGCACTAGAAGAATATTTATGTTTAAGGGGAATTCCAACCTATGGTCT
GGATGGGGATAACATGAGAACTGGTCTCAATAAAAATTTAGGGTTTTCCC
CTGAAGACCGTGAAGAAAATATCCGTCGTGTCGGGGAAGTTGCTAAATTA
TTTGCCGACGCTGGTATAGTTTGTTTGTCCAGTTTTATTTCACCTTACGA
AAAAGATCGTTTGAAAGCACGTAAATTGCATGAAGAAGCTGGCCTCCCGT
TCTTCGAGTGCTACGTCGATACGCCGTTAAACGTATGCGAGACGCGCGAC
GTGAAAGGTCTGTATAAGAAGGCCAGAGACGGCGTCATTAAAGGATTTAC
CGGTATCGATTCACCGTATCAAGCACCGAGCAATCCAGAGCTTGTTTTGA
AAGCTGGccaacaaagcattgatgaatGCGTCCAAGAGATTGTGAAATTA
CTGGAGAAGAATCACATTGTACCTCTCACAGTCATCAACGAAGTCCGTGA
ACTCTTTGTCAATGATGACGAGTTACACGAACAAAAAGTGATCGCTGAAT
CATTACCCAGTCTCCCTATCAATAAAGTTGACATGCAATGGCTTCAGGTG
TTAGCTGAAGGTTGGGCGTCACCCTTGGAAGGGTTTATGTATGAGCGCGA
ATATCTACAGACGCTTCATTTCAATTGTTTACAAGATTCAGATAATATCA
ATCAATCAGTTCCCATTGTATTACCTGTCACTACTGAACTAAAAGAATCA
CTGGAGAATAAAGGAGAAATCGCACTTGAATATGACGGTCGTCGTGTAGC
CATCCTCGGTGAAACAGAGTTCTTCCCACATCGTAAAGAGGAGAGATGTT
GTCGACAATTCGGTACACGAAGCGTGAAACAACCTcatattgaaatgatt
ttaGCTGCAGGTGATTGGTGTGTTGGTGGCAAATTACGTGTCTTAGGTAA
AATTGAATGGAACGATGGTCTTGATGAATATCGATTGAAACCAAACCAAC
TTCGCAAGAAATTTGCTGAAATGAAGGCGGATGCTGTGTTCGCTTTCCAA
TTACGTAATCCTGTGCACAACGGACACGCCCTTTTGATGCGAGACACCAA
ACGGAACTTGGTTGAACGTGGTTACAAAAAACCGGTCTTACTTTTACATC
CTTTGGGTGGTTGGACTAAAAATGATGACGTACCTTTGCCAATTCGTATT
AAGCAGCATTTGGCGGTCTTGAAAGAAGGTGTATTAGATCCAGAGTCTAC
TGTCTTAGCTATCTTTCCGTCTCCAATGATGTATGCTGGCCCAACAGAAG
TCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTACATTCTACATT
GTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAACCTGGGGATCT
GTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCTCCTGGTCTCG
TTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAATAAAGTAAAA
CATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaatttgaatttat
ttctgGTACTAAGATGAGAGCTTTTGCCAGAAATGGTGATACTCCACCAG
ATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGATTATTACCAA
TCAATCGTCAAGAATGATTAAATGGCATCAGCGAACAACGAGCCAAGCAG
TTCATTGGGTATTGCAAACAAAGCCACCAATGTGGTCTTTCAAAAAGGTC
ACGTGACACGCAAGAAACGTGGACAAGTGTTGGGTCAGTCACATGGTTTT
AGGGGATGTACTATTTGGTTTACAGGTTTATCGGGAGCTGGAAAGACAAC
TATCAGTTTCGCACTAGAAGAATATTTATGTTTAAGGGGAATTCCAACCT
ATGGTCTGGATGGGGATAACATGAGAACTGGTCTCAATAAAAATTTAGGG
TTTTCCCCTGAAGACCGTGAAGAAAATATCCGTCGTGTCGGGGAAGTTGC
TAAATTATTTGCCGACGCTGGTATAGTTTGTTTGTCCAGTTTTATTTCAC
CTTACGAAAAAGATCGTTTGAAAGCACGTAAATTGCATGAAGAAGCTGGC
CTCCCGTTCTTCGAGTGCTACGTCGATACGCCGTTAAACGTATGCGAGAC
GCGCGACGTGAAAGGTCTGTATAAGAAGGCCAGAGACGGCGTCATTAAAG
GATTTACCGGTATCGATTCACCGTATCAAGCACCGAGCAATCCAGAGCTT
GTTTTGAAAGCTGGccaacaaagcattgatgaatGCGTCCAAGAGATTGT
GAAATTACTGGAGAAGAATCACATTGTACCTCTCACAGTCATCAACGAAG
TCCGTGAACTCTTTGTCAATGATGACGAGTTACACGAACAAAAAGTGATC
GCTGAATCATTACCCAGTCTCCCTATCAATAAAGTTGACATGCAATGGCT
TCAGGTGTTAGCTGAAGGTTGGGCGTCACCCTTGGAAGGGTTTATGTATG
AGCGCGAATATCTACAGACGCTTCATTTCAATTGTTTACAAGATTCAGAT
AATATCAATCAATCAGTTCCCATTGTATTACCTGTCACTACTGAACTAAA
AGAATCACTGGAGAATAAAGGAGAAATCGCACTTGAATATGACGGTCGTC
GTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCACATCGTAAAGAGGAG
AGATGTTGTCGACAATTCGGTACACGAAGCGTGAAACAACCTcatattga
aatgattttaGCTGCAGGTGATTGGTGTGTTGGTGGCAAATTACGTGTCT
TAGGTAAAATTGAATGGAACGATGGTCTTGATGAATATCGATTGAAACCA
AACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCGGATGCTGTGTTCGC
TTTCCAATTACGTAATCCTGTGCACAACGGACACGCCCTTTTGATGCGAG
ACACCAAACGGAACTTGGTTGAACGTGGTTACAAAAAACCGGTCTTACTT
TTACATCCTTTGGGTGGTTGGACTAAAAATGATGACGTACCTTTGCCAAT
TCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGGTGTATTAGATCCAG
AGTCTACTGTCTTAGCTATCTTTCCGTCTCCAATGATGTATGCTGGCCCA
ACAGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAGCTACATT
CTACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGACCAACCTG
GGGATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCATGGCTCCT
GGTCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTTACAATAA
AGTAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaagaatttg
aatttatttctgGTACTAAGATGAGAGCTTTTGCCAGAAATGGTGATACT
CCACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAGCCGATTA
TTACCAATCAATCGTCAAGAATGATTAAATGGCATCAGCGAACAACGAGC
CAAGCAGTTCATTGGGTATTGCAAACAAAGCCACCAATGTGGTCTTTCAA
AAAGGTCACGTGACACGCAAGAAACGTGGACAAGTGTTGGGTCAGTCACA
TGGTTTTAGGGGATGTACTATTTGGTTTACAGGTTTATCGGGAGCTGGAA
AGACAACTATCAGTTTCGCACTAGAAGAATATTTATGTTTAAGGGGAATT
CCAACCTATGGTCTGGATGGGGATAACATGAGAACTGGTCTCAATAAAAA
TTTAGGGTTTTCCCCTGAAGACCGTGAAGAAAATATCCGTCGTGTCGGGG
AAGTTGCTAAATTATTTGCCGACGCTGGTATAGTTTGTTTGTCCAGTTTT
ATTTCACCTTACGAAAAAGATCGTTTGAAAGCACGTAAATTGCATGAAGA
AGCTGGCCTCCCGTTCTTCGAGTGCTACGTCGATACGCCGTTAAACGTAT
GCGAGACGCGCGACGTGAAAGGTCTGTATAAGAAGGCCAGAGACGGCGTC
ATTAAAGGATTTACCGGTATCGATTCACCGTATCAAGCACCGAGCAATCC
AGAGCTTGTTTTGAAAGCTGGccaacaaagcattgatgaatGCGTCCAAG
AGATTGTGAAATTACTGGAGAAGAATCACATTGTACCTCTCACAGTCATC
AACGAAGTCCGTGAACTCTTTGTCAATGATGACGAGTTACACGAACAAAA
AGTGATCGCTGAATCATTACCCAGTCTCCCTATCAATAAAGTTGACATGC
AATGGCTTCAGGTGTTAGCTGAAGGTTGGGCGTCACCCTTGGAAGGGTTT
ATGTATGAGCGCGAATATCTACAGACGCTTCATTTCAATTGTTTACAAGA
TTCAGATAATATCAATCAATCAGTTCCCATTGTATTACCTGTCACTACTG
AACTAAAAGAATCACTGGAGAATAAAGGAGAAATCGCACTTGAATATGAC
GGTCGTCGTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCACATCGTAA
AGAGGAGAGATGTTGTCGACAATTCGGTACACGAAGCGTGAAACAACCTc
atattgaaatgattttaGCTGCAGGTGATTGGTGTGTTGGTGGCAAATTA
CGTGTCTTAGGTAAAATTGAATGGAACGATGGTCTTGATGAATATCGATT
GAAACCAAACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCGGATGCTG
TGTTCGCTTTCCAATTACGTAATCCTGTGCACAACGGACACGCCCTTTTG
ATGCGAGACACCAAACGGAACTTGGTTGAACGTGGTTACAAAAAACCGGT
CTTACTTTTACATCCTTTGGGTGGTTGGACTAAAAATGATGACGTACCTT
TGCCAATTCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGGTGTATTA
GATCCAGAGTCTACTGTCTTAGCTATCTTTCCGTCTCCAATGATGTATGC
TGGCCCAACAGAAGTCCAATGGCATTGCAAAGCACGAATTGCCGCAGGAG
CTACATTCTACATTGTTGGTCGTGATCCAGCCGGTATGGGACATCCTGAC
CAACCTGGGGATCTGTACGATGCCACACACGGACGTAAGGTCCTCACCAT
GGCTCCTGGTCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTTGCTGCTT
ACAATAAAGTAAAACATCAAATGACATTTTTTGATCCAGAAAAGAAGGaa
gaatttgaatttatttctgGTACTAAGATGAGAGCTTTTGCCAGAAATGG
TGATACTCCACCAGATGGCTTCATGGCACCTACCGCTTGGAAAGTGTTAG
CCGATTATTACCAATCAATCGTCAAGAATGATTAAATGGCATCAGCGAAC
AACGAGCCAAGCAGTTCATTGGGTATTGCAAACAAAGCCACCAATGTGGT
CTTTCAAAAAGGTCACGTGACACGCAAGAAACGTGGACAAGTGTTGGGTC
AGTCACATGGTTTTAGGGGATGTACTATTTGGTTTACAGGTTTATCGGGA
GCTGGAAAGACAACTATCAGTTTCGCACTAGAAGAATATTTATGTTTAAG
GGGAATTCCAACCTATGGTCTGGATGGGGATAACATGAGAACTGGTCTCA
ATAAAAATTTAGGGTTTTCCCCTGAAGACCGTGAAGAAAATATCCGTCGT
GTCGGGGAAGTTGCTAAATTATTTGCCGACGCTGGTATAGTTTGTTTGTC
CAGTTTTATTTCACCTTACGAAAAAGATCGTTTGAAAGCACGTAAATTGC
ATGAAGAAGCTGGCCTCCCGTTCTTCGAGTGCTACGTCGATACGCCGTTA
AACGTATGCGAGACGCGCGACGTGAAAGGTCTGTATAAGAAGGCCAGAGA
CGGCGTCATTAAAGGATTTACCGGTATCGATTCACCGTATCAAGCACCGA
GCAATCCAGAGCTTGTTTTGAAAGCTGGccaacaaagcattgatgaatGC
GTCCAAGAGATTGTGAAATTACTGGAGAAGAATCACATTGTACCTCTCAC
AGTCATCAACGAAGTCCGTGAACTCTTTGTCAATGATGACGAGTTACACG
AACAAAAAGTGATCGCTGAATCATTACCCAGTCTCCCTATCAATAAAGTT
GACATGCAATGGCTTCAGGTGTTAGCTGAAGGTTGGGCGTCACCCTTGGA
AGGGTTTATGTATGAGCGCGAATATCTACAGACGCTTCATTTCAATTGTT
TACAAGATTCAGATAATATCAATCAATCAGTTCCCATTGTATTACCTGTC
ACTACTGAACTAAAAGAATCACTGGAGAATAAAGGAGAAATCGCACTTGA
ATATGACGGTCGTCGTGTAGCCATCCTCGGTGAAACAGAGTTCTTCCCAC
ATCGTAAAGAGGAGAGATGTTGTCGACAATTCGGTACACGAAGCGTGAAA
CAACCTcatattgaaatgattttaGCTGCAGGTGATTGGTGTGTTGGTGG
CAAATTACGTGTCTTAGGTAAAATTGAATGGAACGATGGTCTTGATGAAT
ATCGATTGAAACCAAACCAACTTCGCAAGAAATTTGCTGAAATGAAGGCG
GATGCTGTGTTCGCTTTCCAATTACGTAATCCTGTGCACAACGGACACGC
CCTTTTGATGCGAGACACCAAACGGAACTTGGTTGAACGTGGTTACAAAA
AACCGGTCTTACTTTTACATCCTTTGGGTGGTTGGACTAAAAATGATGAC
GTACCTTTGCCAATTCGTATTAAGCAGCATTTGGCGGTCTTGAAAGAAGG
TGTATTAGATCCAGAGTCTACTGTCTTAGCTATCTTTCCGTCTCCAATGA
TGTATGCTGGCCCAACAGAAGTCCAATGGCATTGCAAAGCACGAATTGCC
GCAGGAGCTACATTCTACATTGTTGGTCGTGATCCAGCCGGTATGGGACA
TCCTGACCAACCTGGGGATCTGTACGATGCCACACACGGACGTAAGGTCC
TCACCATGGCTCCTGGTCTCGTTCAGTTAGAGATTGTTCCTTTCAAAGTT
GCTGCTTACAATAAAGTAAAACATCAAATGACATTTTTTGATCCAGAAAA
GAAGGaagaatttgaatttatttctgGTACTAAGATGAGAGCTTTTGCCA
GAAATGGTGATACTCCACCAGATGGCTTCATGGCACCTACCGCTTGGAAA
GTGTTAGCCGATTATTACCAATCAATCGTCAAGAATGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031992XLOC_031992Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050515-proteinTCONS_00050515-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050515-exon-scaffold_179-1491911889:251486..251713TCONS_00050515-exon-scaffold_179-1491911889:251486..251713Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1510915933:251486..251713TCONS_00050515-exon-scaffold_179-1510915933:251486..251713Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1575043694:251486..251713TCONS_00050515-exon-scaffold_179-1575043694:251486..251713Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1491911889:252003..252797TCONS_00050515-exon-scaffold_179-1491911889:252003..252797Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1510915933:252003..252797TCONS_00050515-exon-scaffold_179-1510915933:252003..252797Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1575043694:252003..252797TCONS_00050515-exon-scaffold_179-1575043694:252003..252797Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1491911889:253209..253391TCONS_00050515-exon-scaffold_179-1491911889:253209..253391Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1510915933:253209..253391TCONS_00050515-exon-scaffold_179-1510915933:253209..253391Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1575043694:253209..253391TCONS_00050515-exon-scaffold_179-1575043694:253209..253391Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1491911889:253846..254157TCONS_00050515-exon-scaffold_179-1491911889:253846..254157Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1510915933:253846..254157TCONS_00050515-exon-scaffold_179-1510915933:253846..254157Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1575043694:253846..254157TCONS_00050515-exon-scaffold_179-1575043694:253846..254157Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1491911889:254599..254620TCONS_00050515-exon-scaffold_179-1491911889:254599..254620Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1510915933:254599..254620TCONS_00050515-exon-scaffold_179-1510915933:254599..254620Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1575043694:254599..254620TCONS_00050515-exon-scaffold_179-1575043694:254599..254620Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1491911889:255626..257015TCONS_00050515-exon-scaffold_179-1491911889:255626..257015Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1510915933:255626..257015TCONS_00050515-exon-scaffold_179-1510915933:255626..257015Clytia hemisphaericaexon
TCONS_00050515-exon-scaffold_179-1575043694:255626..257015TCONS_00050515-exon-scaffold_179-1575043694:255626..257015Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_179supercontigscaffold_179:251486..257015 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.03278	7.9203	6.50406	6.52319	3.95801	3.13374	20.5181	25.5225	10.4965	17.4991	6.07145	5.68565	3.35601	2.4039	6.54361	7.17394	15.5029	8.73658	2.57718	5.08648	6.91266	6.93101	7.34673	7.63679	3.588	4.20621	9.82271	5.87755	4.73172	3.54842
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002650Sulphate_adenylyltransferase
IPR014729Rossmann-like_a/b/a_fold
IPR025980ATP-Sase_PUA-like_dom
IPR024951Sulfurylase_cat_dom
IPR002891APS_kinase
IPR015947PUA-like_domain
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0000103sulfate assimilation
Vocabulary: Molecular Function
TermDefinition
GO:0004781sulfate adenylyltransferase (ATP) activity
GO:0004020adenylylsulfate kinase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000103 sulfate assimilation
molecular_function GO:0004020 adenylylsulfate kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004781 sulfate adenylyltransferase (ATP) activity
Blast
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BLAST of TCONS_00050515 vs. Swiss-Prot (Human)
Match: PAPS2 (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Homo sapiens GN=PAPSS2 PE=1 SV=2)

HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0
Identity = 401/602 (66.61%), Postives = 487/602 (80.90%), Query Frame = 3 
Query:  120 NKATNVVFQKGHVTRKKRGQVLGQSHGFRGCTIWFTGLSGAGKTTISFALEEYLCLRGIPTYGLDGDNMRTGLNKNLGFSPEDREENIRRVGEVAKLFADAGIVCLSSFISPYEKDRLKARKLHEEAGLPFFECYVDTPLNVCETRDVKGLYKKARDGVIKGFTGIDSPYQAPSNPELVLKAGQQSIDECVQEIVKLLEKNHIVPLTVINEVRELFVNDDELHEQKVIAESLPSLPINKVDMQWLQVLAEGWASPLEGFMYEREYLQTLHFNCLQDSDNINQSVPIVLPVTTELKESLENKGEIALEYDGRRVAILGETEFFPHRKEERCCRQFGTRSVKQPHIEMILAAGDWCVGGKLRVLGKIEWNDGLDEYRLKPNQLRKKFAEMKADAVFAFQLRNPVHNGHALLMRDTKRNLVERGYKKPVLLLHPLGGWTKNDDVPLPIRIKQHLAVLKEGVLDPESTVLAIFPSPMMYAGPTEVQWHCKARIAAGATFYIVGRDPAGMGHPDQPGDLYDATHGRKVLTMAPGLVQLEIVPFKVAAYNKVKHQMTXXXXXXXXXXXXISGTKMRAFARNGDTPPDGFMAPTAWKVLADYYQSIVKN 1925
             K+TNVV+Q  HV+R KRGQV+G   GFRGCT+W TGLSGAGKTTISFALEEYL    IP Y LDGDN+R GLN+NLGFSP DREENIRR+ EVAKLFADAG+VC++SFISP+ KDR  ARK+HE AGLPFFE +VD PLN+CE+RDVKGLYK+AR G IKGFTGIDS Y+ P  PE VLK    ++ +CV ++V+LL++ +IVP T+I ++ ELFV +++L   +  AE+LPSL I K+D+QW+QVL+EGWA+PL+GFM E+EYLQ +HF+ L D   IN S+PIVLPV+ E K  LE   +  L + GRRVAIL + EF+ HRKEERC R +GT   K PHI+M++ +GDW VGG L+VL KI WNDGLD+YRL P +L++K  EM ADAVFAFQLRNPVHNGHALLM+DT+R L+ERGYK PVLLLHPLGGWTK+DDVPL  R+KQH AVL+EGVLDP+ST++AIFPSPM+YAGPTEVQWHC++R+ AGA FYIVGRDPAGM HP+   DLY+ THG KVL+MAPGL  +EI+PF+VAAYNK K  M F+DP +  EF+FISGT+MR  AR G+ PPDGFMAP AWKVL DYY+S+ KN
Sbjct:   13 QKSTNVVYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTISFALEEYLVSHAIPCYSLDGDNVRHGLNRNLGFSPGDREENIRRIAEVAKLFADAGLVCITSFISPFAKDRENARKIHESAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPERVLKTNLSTVSDCVHQVVELLQEQNIVPYTIIKDIHELFVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTLLDDGVINMSIPIVLPVSAEDKTRLEGCSKFVLAHGGRRVAILRDAEFYEHRKEERCSRVWGTTCTKHPHIKMVMESGDWLVGGDLQVLEKIRWNDGLDQYRLTPLELKQKCKEMNADAVFAFQLRNPVHNGHALLMQDTRRRLLERGYKHPVLLLHPLGGWTKDDDVPLDWRMKQHAAVLEEGVLDPKSTIVAIFPSPMLYAGPTEVQWHCRSRMIAGANFYIVGRDPAGMPHPETKKDLYEPTHGGKVLSMAPGLTSVEIIPFRVAAYNKAKKAMDFYDPARHNEFDFISGTRMRKLAREGENPPDGFMAPKAWKVLTDYYRSLEKN 614
The following BLAST results are available for this feature:
BLAST of TCONS_00050515 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAPS20.000e+066.61Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
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