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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050481 ID=TCONS_00050481|Name=TCONS_00050481|organism=Clytia hemisphaerica|type=transcript|length=911bp
GTACTATCtcataaaataagaaaatttaatttctttttgctcCAAAATAG
AaggaaatttggtcaaaattttcccAGTAATGCTAAATCCACAGAATGGA
CGCTATTGTTTCTCGAACTAATTGAACTTTTCTTCAATCAAACTCCTCCA
ACTAATTGAACTTCTTGAACTCCTtgcaaattcttaaaaatttccaaaag
ttCAAGTTCAAGGAATTACTTGAATTTTACTTGTTTGAGTAACTTTGAGT
ACAGTATTTCGATTCTCCCACTGTTCGAGTAATGGGGTCTGGATTATACA
TCCTAACAATAGATAGATTAATAAGCCTGAAATTTCCACTTTTCCAATTA
GAAGCTGCTGGTATTGTCACAATAGCAGCACAATTTGTACCATCAATCAG
CTTTCACTTGAGACTAGGACTAGCTTTCTATGGTATATCAAAAGATATCA
TTGATACTTTCTGACTGCTGTATAATGAATCTGTAATAAGATCatctttt
aaatcttttaacatttttatttggTGAAGAAGAACCTAGAAGAACTTctc
tttattttaaaataacttttgCCCAATGAGACGGAAAGTCATTGATAAAG
GTGAGAGTTTTCCACATCAAGGAaggttcaaaataaaataaaatggagaA
AGCAATATAACCTGTCCTTACGCTTAATGGCCAAATATAAAAAACCTTac
aaacatcaaaactaagCAACTGAAATGTCACAAATAGAACCCTTTATATA
CAACATTCCCTTTGTAATGTCAAAGTGAAATAAAAGAATCTCAAAGGATT
ACCCATTTCAGAAGACAGAAAAACACTTTACCCAGCTTTATCTTGAACAA
TCTTCACCTGAAATCCTggcaataaaaaacattttgctaaatgaaagata
acaaaatattt Run BLAST on NCBI transcript from alignment at scaffold_173:1484..2394 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050481 ID=TCONS_00050481|Name=TCONS_00050481|organism=Clytia hemisphaerica|type=transcript|length=911bp|location=Sequence derived from alignment at scaffold_173:1484..2394 (Clytia hemisphaerica)
aaatattttgttatctttcatttagcaaaatgttttttattgccAGGATT
TCAGGTGAAGATTGTTCAAGATAAAGCTGGGTAAAGTGTTTTTCTGTCTT
CTGAAATGGGTAATCCTTTGAGATTCTTTTATTTCACTTTGACATTACAA
AGGGAATGTTGTATATAAAGGGTTCTATTTGTGACATTTCAGTTGcttag
ttttgatgtttgtAAGGTTTTTTATATTTGGCCATTAAGCGTAAGGACAG
GTTATATTGCTTtctccattttattttattttgaacctTCCTTGATGTGG
AAAACTCTCACCTTTATCAATGACTTTCCGTCTCATTGGGcaaaagttat
tttaaaataaagagAAGTTCTTCTAGGTTCTTCTTCAccaaataaaaatg
ttaaaagatttaaaagatGATCTTATTACAGATTCATTATACAGCAGTCA
GAAAGTATCAATGATATCTTTTGATATACCATAGAAAGCTAGTCCTAGTC
TCAAGTGAAAGCTGATTGATGGTACAAATTGTGCTGCTATTGTGACAATA
CCAGCAGCTTCTAATTGGAAAAGTGGAAATTTCAGGCTTATTAATCTATC
TATTGTTAGGATGTATAATCCAGACCCCATTACTCGAACAGTGGGAGAAT
CGAAATACTGTACTCAAAGTTACTCAAACAAGTAAAATTCAAGTAATTCC
TTGAACTTGaacttttggaaatttttaagaatttgcaAGGAGTTCAAGAA
GTTCAATTAGTTGGAGGAGTTTGATTGAAGAAAAGTTCAATTAGTTCGAG
AAACAATAGCGTCCATTCTGTGGATTTAGCATTACTgggaaaattttgac
caaatttcctTCTATTTTGgagcaaaaagaaattaaattttcttatttta
tgaGATAGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050481-exon-scaffold_173-1491911889:1484..2394 | TCONS_00050481-exon-scaffold_173-1491911889:1484..2394 | Clytia hemisphaerica | exon |
| TCONS_00050481-exon-scaffold_173-1510915933:1484..2394 | TCONS_00050481-exon-scaffold_173-1510915933:1484..2394 | Clytia hemisphaerica | exon |
| TCONS_00050481-exon-scaffold_173-1575043694:1484..2394 | TCONS_00050481-exon-scaffold_173-1575043694:1484..2394 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_173 | supercontig | scaffold_173:1484..2394 . |
Blast
The following BLAST results are available for this feature:
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