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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050474 ID=TCONS_00050474|Name=TCONS_00050474|organism=Clytia hemisphaerica|type=transcript|length=949bp
AGAACATTGCCCACAATTTGTACTTATTTAACCCGATTTTATTTCTTATG
TTACCCTTGTTCCTGATCCCCTGTTTGTTAGGCATATAAGATTACTGTTC
GTTTCTGCTGACtggctttcttttttttcacattaCTTACAATTTCAACC
TGACATTTTGACCTATGATTTTTCATCATAACCATTTCTTTTTTGTGTTg
ctttttttgccaaaaccttCGAAAAAGTCTTATAGATTTGGTTGTCATGA
ATATCAGTCTTTCTAAGGTAAAAAATCAATGCACAATgcaaacaaagaaa
caaaaagagagaaaacatgaaaaacaacgTACCAGAGTGGCCAGAAGTGA
CAGCTGGAAGCTGACCAAGATGGCTGAAAGCATTGTGCCTTGCCTTGAAT
GAACTTTAGATTAGCCTAGGTTAGAGCCAGTCTGGAAAGGTTAGCCTAGG
TTAGAGACATGTTTGACATGCATCTACTGATTTGCTGAcctatcatttga
ttttttagaaGTTTAACAAGAGCTTCAGCACCTGCTGATCTCACAGCTCC
TTTAACTTCACCATCACCACAACAAAAACAACCACAAGAAGAAAANCAAG
CATCTACTGATTTGCTGActtatcatttgattttttagaaGTTTAACAAG
AGCTTCAGCACCTGCTGATCTCACAGCTCCTTTAACTTCACCATCGCCAC
AACAAAAACAACCACAAGAAGAAAACGAACAGCAACCACCTGTATCTAAA
AGCTTCAGACAATTACCAAGTACATCAAAACCCAATAGTAACAGCTCAAA
ATTTATTCAAGACAATTCTACTACACTTGAAGATATTAACCAATTTGGAA
GTGAATTTGTTTTacatatttcaacaccaaaGAAGCTTTTTACTCCACCA
CCAAAAGACGAATTCAGTATGGTAAAAGATAAAGAATATGAGAAATGGC Run BLAST on NCBI transcript from alignment at scaffold_173:6506..7454+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050474 ID=TCONS_00050474|Name=TCONS_00050474|organism=Clytia hemisphaerica|type=transcript|length=949bp|location=Sequence derived from alignment at scaffold_173:6506..7454+ (Clytia hemisphaerica)
AGAACATTGCCCACAATTTGTACTTATTTAACCCGATTTTATTTCTTATG
TTACCCTTGTTCCTGATCCCCTGTTTGTTAGGCATATAAGATTACTGTTC
GTTTCTGCTGACtggctttcttttttttcacattaCTTACAATTTCAACC
TGACATTTTGACCTATGATTTTTCATCATAACCATTTCTTTTTTGTGTTg
ctttttttgccaaaaccttCGAAAAAGTCTTATAGATTTGGTTGTCATGA
ATATCAGTCTTTCTAAGGTAAAAAATCAATGCACAATgcaaacaaagaaa
caaaaagagagaaaacatgaaaaacaacgTACCAGAGTGGCCAGAAGTGA
CAGCTGGAAGCTGACCAAGATGGCTGAAAGCATTGTGCCTTGCCTTGAAT
GAACTTTAGATTAGCCTAGGTTAGAGCCAGTCTGGAAAGGTTAGCCTAGG
TTAGAGACATGTTTGACATGCATCTACTGATTTGCTGAcctatcatttga
ttttttagaaGTTTAACAAGAGCTTCAGCACCTGCTGATCTCACAGCTCC
TTTAACTTCACCATCACCACAACAAAAACAACCACAAGAAGAAAANCAAG
CATCTACTGATTTGCTGActtatcatttgattttttagaaGTTTAACAAG
AGCTTCAGCACCTGCTGATCTCACAGCTCCTTTAACTTCACCATCGCCAC
AACAAAAACAACCACAAGAAGAAAACGAACAGCAACCACCTGTATCTAAA
AGCTTCAGACAATTACCAAGTACATCAAAACCCAATAGTAACAGCTCAAA
ATTTATTCAAGACAATTCTACTACACTTGAAGATATTAACCAATTTGGAA
GTGAATTTGTTTTacatatttcaacaccaaaGAAGCTTTTTACTCCACCA
CCAAAAGACGAATTCAGTATGGTAAAAGATAAAGAATATGAGAAATGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050474-exon-scaffold_173-1491911889:6506..7454 | TCONS_00050474-exon-scaffold_173-1491911889:6506..7454 | Clytia hemisphaerica | exon |
| TCONS_00050474-exon-scaffold_173-1510915933:6506..7454 | TCONS_00050474-exon-scaffold_173-1510915933:6506..7454 | Clytia hemisphaerica | exon |
| TCONS_00050474-exon-scaffold_173-1575043694:6506..7454 | TCONS_00050474-exon-scaffold_173-1575043694:6506..7454 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_173 | supercontig | scaffold_173:6506..7454 + |
Blast
The following BLAST results are available for this feature:
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