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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050394 ID=TCONS_00050394|Name=TCONS_00050394|organism=Clytia hemisphaerica|type=transcript|length=532bp
CAGCATCTGTTACAGAGTTAAACAGCCAAGGAAACATATCAACTAATTCT
ATCGATAAAACGAATTCCGCCACAAGCAGTACGTATCNATGTCATTCTGG
TCGATCAAGTGAATGAAGAAGCCATCTCCAACGATTCAACGAAGAAGAGA
GTAATGAAAAACGATGAAGGAGGAGGAGGAACGGAAAGAGAGAAAGAAGC
CTCGAAGGAAAGAGTGAGCACACTCAAAGAGGAGACACCACCAGCCGCCA
AGAAAGCTTGTTTGAATGAGAGAGGAAGTACCCCTTTCATTTTGATGCAA
GAAATGTTACGTGGTGAAACTGATCTCAAACTACCACCAGATCCAAAGCA
ATGGAGTGTCGAGGAAGTTTCGAAATTCATGGAATGGTTGGTCAGTCAGC
TTCGTGTAAGCAAACCAACCACGCCGTACCAAAAATTCCACATTGATGGA
AAATTATTGTATAAAATTCGTAAAAGAAGTCTTCAGCGTTTCTTTACCGA
TAGTGCGGTTGACATCCTTTGGATACACGTGN Run BLAST on NCBI transcript from alignment at scaffold_17:91562..92613- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050394 ID=TCONS_00050394|Name=TCONS_00050394|organism=Clytia hemisphaerica|type=transcript|length=1052bp|location=Sequence derived from alignment at scaffold_17:91562..92613- (Clytia hemisphaerica)
CAGCATCTGTTACAGAGTTAAACAGCCAAGGAAACATATCAACTAATTCT
ATCGATAAAACGAATTCCGCCACAAGCAGTACGTATCNATGTCATTCTGG
TCGATCAAGTGAATGAAGAAGCCATCTCCAACGATTCAACGAAGAAGAGA
GTAATGAAAAACGATGAAGGAGGAGGAGGAACGGAAAGAGAGAAAGAAGC
CTCGAAGGAAAGAGTGAGCACACTCAAAGAGGAGACACCACCAGCCGCCA
AGAAAGCTTGTTTGAATGAGAGAGGAAGTACCCCTTTCATTTTGATGCAA
GAAATGTTACGTGGTGAAACTGATCTCAAACTACCACCAGGTGATTTTAT
TTCTTCAAATTGCCCAATTAAAAGGTTTTGTACAAATATTTTTCACAAAA
GTTTGCAAGCCTTTTTTTGTACGAAATAGTACGAAATTGATATTAACTCG
CATATGCACCGATAGAGTTAGTTGATTTTGGTTCCGTTTCTTNAAGGATT
TGGTGAAAACTGTTTTCGGCGAGCCTAGATATTCGAAATGTTTCACTTTT
GGCCAGAACTCATTTAGACATGTGGGTGATTTAAAAAAATATGCATAGAT
TTAGCCCAGCTTTAACCCACCAATATCACGGTTGACTTCTGCNTATGCTG
GGAACTCATTTTTAGTGGGACTTTAACCCACTTGCACACTTTGAATCTCG
AATACGTCAATTCGATTGGTTCTTTGTCGTTTTATTTAAATTAGTATTAT
AACATTAACCCATAATTCACAAGGTCCATTAATCAATCTTATTTGTTCTT
TATTTAACAAAGATACGGAGGGAATGCTGTTAACAAAATAAAGTTTGTAT
TGATTTCTAGATCCAAAGCAATGGAGTGTCGAGGAAGTTTCGAAATTCAT
GGAATGGTTGGTCAGTCAGCTTCGTGTAAGCAAACCAACCACGCCGTACC
AAAAATTCCACATTGATGGAAAATTATTGTATAAAATTCGTAAAAGAAGT
CTTCAGCGTTTCTTTACCGATAGTGCGGTTGACATCCTTTGGATACACGT
GN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050394-exon-scaffold_17-1575043694:92274..92613 | TCONS_00050394-exon-scaffold_17-1575043694:92274..92613 | Clytia hemisphaerica | exon |
| TCONS_00050394-exon-scaffold_17-1575043694:91562..91753 | TCONS_00050394-exon-scaffold_17-1575043694:91562..91753 | Clytia hemisphaerica | exon |
| TCONS_00050394-exon-scaffold_17-1510915933:92274..92613 | TCONS_00050394-exon-scaffold_17-1510915933:92274..92613 | Clytia hemisphaerica | exon |
| TCONS_00050394-exon-scaffold_17-1510915933:91562..91753 | TCONS_00050394-exon-scaffold_17-1510915933:91562..91753 | Clytia hemisphaerica | exon |
| TCONS_00050394-exon-scaffold_17-1491911889:92274..92613 | TCONS_00050394-exon-scaffold_17-1491911889:92274..92613 | Clytia hemisphaerica | exon |
| TCONS_00050394-exon-scaffold_17-1491911889:91562..91753 | TCONS_00050394-exon-scaffold_17-1491911889:91562..91753 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:91562..92613 - |
Blast
The following BLAST results are available for this feature:
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