TCONS_00050366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050366
Unique NameTCONS_00050366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length95

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050366 ID=TCONS_00050366|Name=TCONS_00050366|organism=Clytia hemisphaerica|type=transcript|length=95bp
ttttcatctaGAGATTCGACACCATCACCAGGTCTTTCAACTTTCAGAAG
ATGTACATCAAACACAAGTACTGAATTTGGTGGGATGTTGTCTGA
Run BLAST on NCBI

transcript from alignment at scaffold_169:357981..358075

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050366 ID=TCONS_00050366|Name=TCONS_00050366|organism=Clytia hemisphaerica|type=transcript|length=95bp|location=Sequence derived from alignment at scaffold_169:357981..358075 (Clytia hemisphaerica)
TCAGACAACATCCCACCAAATTCAGTACTTGTGTTTGATGTACATCTTCT
GAAAGTTGAAAGACCTGGTGATGGTGTCGAATCTCtagatgaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031893XLOC_031893Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050366-exon-scaffold_169-1491911889:357981..358075TCONS_00050366-exon-scaffold_169-1491911889:357981..358075Clytia hemisphaericaexon
TCONS_00050366-exon-scaffold_169-1510915933:357981..358075TCONS_00050366-exon-scaffold_169-1510915933:357981..358075Clytia hemisphaericaexon
TCONS_00050366-exon-scaffold_169-1575043694:357981..358075TCONS_00050366-exon-scaffold_169-1575043694:357981..358075Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:357981..358075 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top