TCONS_00050321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050321
Unique NameTCONS_00050321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2737

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050321 ID=TCONS_00050321|Name=TCONS_00050321|organism=Clytia hemisphaerica|type=transcript|length=2737bp
AGAAAAGCAAAGAgaaagcatcttctgaaaatttccaTAATATCATCAAC
GGTTATGAAGAGCGAGAAATGGAAGTGAGGAAATCAAATCCCAACTCCCT
CAACAAAAGTCATCATCAGCACAACAACAAAAGTCCGGGATGTTATTCAC
AATTCAAAAATTTACTGACCACCTCCCGCTTTGCAGCCATACCGTNCTAT
TCACAATTCAAAAAGTTGCTGACCACCTCCCGCTTTGCAGCCATACCGTT
GATTTGCGTATACGGAATTTTGCTCTATTTGTATCTGTATTACATGGTGT
TTTCATCGAGCACTGGATTGAAGGATCATTCTAAGCGGAAAAATGCTTCC
TCCTCGTGTTTTGTGGATGATCTCGAGAAGGAAATTCCAATATTAAAAAA
CAAGATCAAAACGAAACTCGAAGCGAAATTTAACTTGAGTTTCAGTCAAT
CATCATCAGATTCGCTAAGCCCGTTTGTCACTCACGATAAAGAGATCATT
AGTGCCGCTGTAGCAGGAACATTCACTTTAAGTGTTGGTACTTTAAGTGT
TTTCTCTCGTCATACCAGATGCATTTTGATGTTGATCCTACCTGGAATTG
TGGCTGGGCGAGGCCGTGCGTTCATGTTAACCATAGCAGTAGGCTTCCTC
ATCGAAGGACCCATCAACAGTGTGAATTACAATGTAAATGAAGTTGTCGA
GAGCACAACCTGTATGTACGAGTCGATGAAGAGTATGGCGTGTTCGTTCA
ACGGACAGTCCAATAGCATCATGGGGCAAATGTGGGAAGTCATCGAGAAA
CAACATAAGTATATGGAAGAACAATTAATGAgaattcaaaatgaaattga
ccGAGCAACGGGAGCATTGAAGGAAAAACTTATAGCACAACAAAATGAAC
TCAAAGCAGCTAAGCGTGCAATCGAATCCAAGCTTCGTGGAACACGAGAT
TTACTTAACAAANCCGAGCAACGGGAGCATTGAAGGAAAAACTTAtagca
aaacaaaatgaactTAAAGCAGCTAAGCGTGCAATCGAATCCAAGCTTCG
TGGAACACGAGATTTACTTAACAAATTAGCAACACCATGCAAATTGGGGA
AGACTATGTTTAACATCGCATCAACTGGACTTCAAAAAGCTGGACAATTC
GCAGCTAATCTTGGTAATAAGATAGCAAAAGCTATTCCTTTTTTTGGGCG
TAAACGGCGTGATGTGGACGTTTGTGGCTTCCCCGTCCCCCTCCCAAATC
TCGAAAACCTCAAACCGGAATTGAGTTTTAAAGAACTCGAAGAACTGAAT
GAATGGGCAAAAGAAATGATCCCTAGCATCAAGGTTAGACCAATGAAAGA
TCTGGATCTTAATCGTCTTCTGGAAGCGCCAAATGTGGAAGACATCCGTT
TCAAAATCCTTGGCACAATAAAAGATGTGtttaaaacaattttggatTAT
TTGTTTTACTTAAAGAAGTTCTTTATCGTTATATCATTACTGTTGTTGAC
GATTGATTCAGTTCGGTATCTGAAACAGTACTTCACCGACAACGCATTCG
ATAATATGTTTGCTGATGATAATCTCCGACGTTTATGGTGGGAAAACGGA
AATGTCTTTGAAAAGTTGACACCGCTCCGTCGATGGGAAATCGAGATGAA
ATACCAGGTCACCGCTTCTGTGAGGTTGTCAAAGAGTGAAATCCAAACCA
TGATTTTGAAATCGTTGACAGCAGTTATTGTGATCGCCATCTCAGTATTT
GTTATCCTCGGAGATTTCGCTTTCAAGGAATTGTTAAACACGCTAGCATC
AAATGCTGGTTTCGCGATCGGTTTCAAAGGGATGGAACAGAGTATAGTTG
CTGATGTCAAACTAGGTGGCCGCGAGAAGAAAGTGGTTTTGCAGAAATTG
AATATACAACGGTTCAATGTGAGCATTGATCCGTGTTTGCCGAGCCCGAT
GAAGACGGAAGGTCAGACGATTATTATTCTTACCGTTATCCTTGTTATCG
TTCTCTTGTCGTGCATTTTCGATGCGTACGCGTTGCGATTACGTGCGAGA
ATCTGTAACTCGTTCTACCCGGATCGTGCCCACGAGAGAGCTGTGTATCT
TCACAAACGCATTTTCACGGGTCGACATTCGAGACGAATCCAACTGCGAG
CTGTCATCCTGAGGGAATTGCGACGACGAAAATTGACCGAGGAGTTTTCC
TGGATGTTTAACATTCGGAAGATTTGTCGCAGAGGTGGTGAACAGGAACA
GACTGATTGTTACGCATGTTTTCAAGGGTTTGGTAAGGTTGGTTCGGAAG
ATGTCGAAGTGAGGGATAATGACGGATCCAAAATCAGATGTAAAATTTGT
AAAGATTGTCACAAAGACtttcaataaaataaagatCACAGCGTGAAAGC
CTACTAAATACAACGTATTTCATCGTATTTggatatttatttattaaact
CTTTACCATATACGGGAATACGAAGTCCAAATACGGTAATATACGTTATC
ATCAACTTAAAAAATTAGAGCGATTTGATTGGCTAATGAGCAGtacatat
tttctttatttttaaataaaagcaGTACAAATAAAAGAAAGCAATTCAAA
ATGGTAACATGAGGCGAGacacttttttgggaaaattaccTTTTGCCAGC
AGTTAAAAGatgaactttttctttttctttttcaaataataaataCATAT
TTTGTTAGGGAAAGGTTTGACCTTTCCAATGGTGTAT
Run BLAST on NCBI

protein sequence of TCONS_00050321-protein

>TCONS_00050321-protein ID=TCONS_00050321-protein|Name=TCONS_00050321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MFNIASTGLQKAGQFAANLGNKIAKAIPFFGRKRRDVDVCGFPVPLPNLE
NLKPELSFKELEELNEWAKEMIPSIKVRPMKDLDLNRLLEAPNVEDIRFK
ILGTIKDVFKTILDYLFYLKKFFIVISLLLLTIDSVRYLKQYFTDNAFDN
MFADDNLRRLWWENGNVFEKLTPLRRWEIEMKYQVTASVRLSKSEIQTMI
LKSLTAVIVIAISVFVILGDFAFKELLNTLASNAGFAIGFKGMEQSIVAD
VKLGGREKKVVLQKLNIQRFNVSIDPCLPSPMKTEGQTIIILTVILVIVL
LSCIFDAYALRLRARICNSFYPDRAHERAVYLHKRIFTGRHSRRIQLRAV
ILRELRRRKLTEEFSWMFNIRKICRRGGEQEQTDCYACFQGFGKVGSEDV
EVRDNDGSKIRCKICKDCHKDFQ
Run BLAST on NCBI

transcript from alignment at scaffold_169:404373..409495+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050321 ID=TCONS_00050321|Name=TCONS_00050321|organism=Clytia hemisphaerica|type=transcript|length=5123bp|location=Sequence derived from alignment at scaffold_169:404373..409495+ (Clytia hemisphaerica)
AGAAAAGCAAAGAgaaagcatcttctgaaaatttccaTAATATCATCAAC GGTTATGAAGAGCGAGAAATGGAAGTGAGGAAATCAAATCCCAACTCCCT CAACAAAAGTCATCATCAGCACAACAACAAAAGTCCGGGATGTTATTCAC AATTCAAAAATTTACTGACCACCTCCCGCTTTGCAGCCATACCGTNCTAT TCACAATTCAAAAAGTTGCTGACCACCTCCCGCTTTGCAGCCATACCGTT GATTTGCGTATACGGAATTTTGCTCTATTTGTATCTGTATTACATGGTGT TTTCATCGAGCACTGGATTGAAGGATCATTCTAAGCGGAAAAATGCTTCC TCCTCGTGTTTTGTGGATGATCTCGAGAAGGAAATTCCAATATTAAAAAA CAAGATCAAAACGAAACTCGAAGCGAAATTTAACTTGAGTTTCAGTCAAT CATCATCAGATTCGCTAAGCCCGTTTGTCACTCACGATAAAGAGATCATT AGTGCCGCTGTAGCAGGAACATTCACTTTAAGTGTTGGTACTTTAAGTGT TTTCTCTCGTCATACCAGATGCATTTTGATGTTGATCCTACCTGGAATTG TGGCTGGGCGAGGCCGTGCGTTCATGTTAACCATAGCAGTAGGCTTCCTC ATCGAAGGACCCATCAACAGTGTGAATTACAATGTAAATGAAGTTGTCGA GAGCACAACCTGTATGTACGAGTCGATGAAGAGTATGGCGTGTTCGTTCA ACGGACAGTCCAATAGCATCATGGGGCAAATGTGGGAAGTCATCGAGAAA CAACATAAGTATATGGAAGAACAATTAATGAgaattcaaaatgaaattga ccGAGCAACGGGAGCATTGAAGGAAAAACTTATAGCACAACAAAATGAAC TCAAAGCAGCTAAGCGTGCAATCGAATCCAAGCTTCGTGGAACACGAGAT TTACTTAACAAANCCGAGCAACGGGAGCATTGAAGGAAAAACTTAtagca aaacaaaatgaactTAAAGCAGCTAAGCGTGCAATCGAATCCAAGCTTCG TGGAACACGAGATTTACTTAACAAATTAGCAACACCATGCAAATTGGGGA AGACTATGTTTAACATCGCATCAACTGGACTTCAAAAAGCTGGACAATTC GCAGCTAATCTTGGTAATAAGATAGCAAAAGCTATTCCTTTTTTTGGGCG TAAACGGCGTGATGTGGACGTTTGTGGCTTCCCCGTCCCCCTCCCAAATC TCGAAAACCTCAAACCGGAATTGAGTTTTAAAGAACTCGAAGAACTGAAT GAATGGGCAAAAGAAATGATCCCTAGCATCAAGGTTAGACCAATGAAAGA TCTGGATCTTAATCGTCTTCTGGAAGCGCCAAATGTGGAAGACATCCGTT TCAAAATCCTTGGCACAATAAAAGATGTGtttaaaacaattttggatTAT TTGTTTTACTTAAAGAAGTTCTTTATCGTTATATCATTACTGTTGTTGAC GATTGATTCAGTTCGGTATCTGAAACAGTACTTCACCGACAACGCATTCG ATAATATGTTTGCTGATGATAATCTCCGACGTTTATGGTGGGAAAACGGA AATGTCTTTGAAAAGTTGACACCGCTCCGTCGATGGGAAATCGAGATGAA ATACCAGGTTAGTGGTAAACAATTCAAAGCTGtctaaaagcttttgaatt atTATAGGCCAGCCATGAAATACCCAGGCCCGGTGGGGGGCTAAGCCCCC CTCCACTTTTTTGCGATCAAGTgaactttttcctttttttttacaaaatc acAAAACAGACAGACAGCGTGTTTGTGTTATGATATAAAAGAGAAATCTT CCTCGTAACGTTTTTCTTGAGCTACACAACTCCAAATTCtgtattttatt atattttgtagTCGGAGGAGTGTGTATTTNCACAACTCCAAATTCtgtat tttattatattttgtagTCGGAGGAGTGTGTATTTGTCCCAGTCTGATGT AGAATATTTTCAAGTTCATAAACGAGAAAGTCTTTCAAAGCAAAGGTTTC GTTCAATTATAAAAGCATAGCATGCAGAGGGGTCTTAGGTCccccctcaa attttaggtcccccctaaacTTGGAATGACTTAGGTCCTACCTCAAaaaa tttgcttcaaaataTTTCCACCTGTAATATTAGAATGGGTACATCAAACA TAAGAAAACAGATAACTGTTTTGAACAGAAGTGTGGTGGGTGTCTCACAG CTGGGgggaaaaaattagtttgaccTATTTGGCGCCCCTATTCCTTTCAG TAAATGCCTCCTTCCGAGCGAAGCAAGGACTTTGAGCGCGCGTAGCGCGC AAAAATCATTCAGCAGGGGGAGCTCTAAGCCCCCGATGGGGGTTCTCGGG GCAGCGTCctcttagaaaatttttgaaattttctGAAAATACAAACAAAA AGTAATTCATCAAGAATGTCTAGGATATCGCTAAATAATACTTTGGAGAA TTAACTAGCCAAATAAATAACAATGAACACTATAAAAAGACAATTTGACA AAAGAAAGAGAGCAAAAAATAAAAACCCCTTTAAATAGCATTTTACCATG GCAACTATCTATTTAGGACTTTTAGCGAGTGAAGCGAGCTCAAAAATTTG AAATTGTAGCTCAAGAATGATCGATATCTTATTATTTTTTATAGTAAAAG TTTGAGCTCCCCCCTCAAATTTTAGGTCCCCCTCAAATTTAGGTCCCCCC CTTACAATCCCCAAAAAACAGCCCCCAACCAGGTATTGAGGTGTAGCCCC CCCCTAAACTGAGAGGGGGTGCATGCTATGAAAAGAGAGAAGGAACGAAA GAAAATGTGAACATGAAGAGTATCAAAAATATACTAAATATAATAATAAT AATAAGGGTTTTTTTATTTCATGCATCCAAAAGTTTACAATTGGCTATTC TCGCAGAGGAAATATTAAAATAGTGTATGTGCAGCGTGGTAAAAAATAGT ATAGAAAGTTACAAAAGTTACAAAGTATAAAATCTACAAATTTGAAATCC ATAAGTAGTATACTGAATGATAAAAAAATCCGGTTTGAATTTGTTTGCAT CAGATCCTTCTGCGGAAGAACGGGACATCGCTTGATTGTTTAGTTCGTAA ATTACGTTTAGTGTAAAACCAAAAATGTCTCTCGATACGTAAATTGCAGT TCTTCGTGCTGCTTCTGATCGCTTTTCGTGACATCTCTTGTCTTTTGAAG GTATGGTGCGCAATTCTTTGGTCGTTACTCCTTTTATTCTGGtctgattt ttttcacaaaaacgcACATTACGTGTTCCATCAATTAGCGCTTCAAGCAA AaccatttttgtcattttcctCAGCCTTTACATATCTTTTTACAGCTaat tttcagcaaaattttcagcttttgcGACGTCAGTTAGAAAAGTCGTCCGT TGCCGTTGAAGTCGTTGCAGCCAAATATACTCTAAATATACCAGGTCGAC AAATTTGGAATGCCAGTAGCGGTAAATAGCTAATACACTTTCATCTTCTT AAGCCGTAGCCCTTCGGAAAATCAGGATTTGGAAATAGGTTGGGATATCA CGGGAATTTTATATTAGCGTACAGGACGACGTGAGGacttttacccccgt cttttctttCTATAGGGCGCCGAAATTAAAACAATTAGAAATATTATAGA CACACTTATATGGTGTGatgaattactttttatttgtatttttcaatccA TTTTTGTGTAGAATTCCAAACATTTTCTAAGGGGGCGCTGCCCCCTAGAA CCCCCGTTGTCACATGAACAGCATTAGTCTGCTCAATGTtcttatcaaaa ttagaaaaatattcttatNCCCCGTTGGGGGGCCAAAACGCTCAGCTCAA AAAAATTCGCTCAACTTCGCTTCGCCCGGAAGCGAGCCTGCCAGCCGATC AGGGAAAACGCGAAATTTAGCCCCACCACTTTAACAGTTGTTCCGCCGGC CCTGAATATCAGgtcttatttttattattattataattattaGGTCACCG CTTCTGTGAGGTTGTCAAAGAGTGAAATCCAAACCATGATTTTGAAATCG TTGACAGCAGTTATTGTGATCGCCATCTCAGTATTTGTTATCCTCGGAGA TTTCGCTTTCAAGGAATTGTTAAACACGCTAGCATCAAATGCTGGTTTCG CGATCGGTTTCAAAGGGATGGAACAGAGTATAGTTGCTGATGTCAAACTA GGTGGCCGCGAGAAGAAAGTGGTTTTGCAGAAATTGAATATACAACGGTT CAATGTGAGCATTGATCCGTGTTTGCCGAGCCCGATGAAGACGGAAGGTC AGACGATTATTATTCTTACCGTTATCCTTGTTATCGTTCTCTTGTCGTGC ATTTTCGATGCGTACGCGTTGCGATTACGTGCGAGAATCTGTAACTCGTT CTACCCGGATCGTGCCCACGAGAGAGCTGTGTATCTTCACAAACGCATTT TCACGGGTCGACATTCGAGACGAATCCAACTGCGAGCTGTCATCCTGAGG GAATTGCGACGACGAAAATTGACCGAGGAGTTTTCCTGGATGTTTAACAT TCGGAAGATTTGTCGCAGAGGTGGTGAACAGGAACAGACTGATTGTTACG CATGTTTTCAAGGGTTTGGTAAGGTTGGTTCGGAAGATGTCGAAGTGAGG GATAATGACGGATCCAAAATCAGATGTAAAATTTGTAAAGATTGTCACAA AGACtttcaataaaataaagatCACAGCGTGAAAGCCTACTAAATACAAC GTATTTCATCGTATTTggatatttatttattaaactCTTTACCATATACG GGAATACGAAGTCCAAATACGGTAATATACGTTATCATCAACTTAAAAAA TTAGAGCGATTTGATTGGCTAATGAGCAGtacatattttctttattttta aataaaagcaGTACAAATAAAAGAAAGCAATTCAAAATGGTAACATGAGG CGAGacacttttttgggaaaattaccTTTTGCCAGCAGTTAAAAGatgaa ctttttctttttctttttcaaataataaataCATATTTTGTTAGGGAAAG GTTTGACCTTTCCAATGGTGTAT

Coding sequence (CDS) from alignment at scaffold_169:404373..409495+

>TCONS_00050321 ID=TCONS_00050321|Name=TCONS_00050321|organism=Clytia hemisphaerica|type=CDS|length=2544bp|location=Sequence derived from alignment at scaffold_169:404373..409495+ (Clytia hemisphaerica)
ATGTTTAACATCGCATCAACTGGACTTCAAAAAGCTGGACAATTCGCAGC
TAATCTTGGTAATAAGATAGCAAAAGCTATTCCTTTTTTTGGGCGTAAAC
GGCGTGATGTGGACGTTTGTGGCTTCCCCGTCCCCCTCCCAAATCTCGAA
AACCTCAAACCGGAATTGAGTTTTAAAGAACTCGAAGAACTGAATGAATG
GGCAAAAGAAATGATCCCTAGCATCAAGGTTAGACCAATGAAAGATCTGG
ATCTTAATCGTCTTCTGGAAGCGCCAAATGTGGAAGACATCCGTTTCAAA
ATCCTTGGCACAATAAAAGATGTGtttaaaacaattttggatTATTTGTT
TTACTTAAAGAAGTTCTTTATCGTTATATCATTACTGTTGTTGACGATTG
ATTCAGTTCGGTATCTGAAACAGTACTTCACCGACAACGCATTCGATAAT
ATGTTTGCTGATGATAATCTCCGACGTTTATGGTGGGAAAACGGAAATGT
CTTTGAAAAGTTGACACCGCTCCGTCGATGGGAAATCGAGATGAAATACC
AGGTCACCGCTTCTGTGAGGTTGTCAAAGAGTGAAATCCAAACCATGATT
TTGAAATCGTTGACAGCAGTTATTGTGATCGCCATCTCAGTATTTGTTAT
CCTCGGAGATTTCGCTTTCAAGGAATTGTTAAACACGCTAGCATCAAATG
CTGGTTTCGCGATCGGTTTCAAAGGGATGGAACAGAGTATAGTTGCTGAT
GTCAAACTAGGTGGCCGCGAGAAGAAAGTGGTTTTGCAGAAATTGAATAT
ACAACGGTTCAATGTGAGCATTGATCCGTGTTTGCCGAGCCCGATGAAGA
CGGAAGGTCAGACGATTATTATTCTTACCGTTATCCTTGTTATCGTTCTC
TTGTCGTGCATTTTCGATGCGTACGCGTTGCGATTACGTGCGAGAATCTG
TAACTCGTTCTACCCGGATCGTGCCCACGAGAGAGCTGTGTATCTTCACA
AACGCATTTTCACGGGTCGACATTCGAGACGAATCCAACTGCGAGCTGTC
ATCCTGAGGGAATTGCGACGACGAAAATTGACCGAGGAGTTTTCCTGGAT
GTTTAACATTCGGAAGATTTGTCGCAGAGGTGGTGAACAGGAACAGACTG
ATTGTTACGCATGTTTTCAAGGGTTTGGTAAGGTTGGTTCGGAAGATGTC
GAAGTGAGGGATAATGACGGATCCAAAATCAGATGTAAAATTTGTAAAGA
TTGTCACAAAGACtttcaataaATGTTTAACATCGCATCAACTGGACTTC
AAAAAGCTGGACAATTCGCAGCTAATCTTGGTAATAAGATAGCAAAAGCT
ATTCCTTTTTTTGGGCGTAAACGGCGTGATGTGGACGTTTGTGGCTTCCC
CGTCCCCCTCCCAAATCTCGAAAACCTCAAACCGGAATTGAGTTTTAAAG
AACTCGAAGAACTGAATGAATGGGCAAAAGAAATGATCCCTAGCATCAAG
GTTAGACCAATGAAAGATCTGGATCTTAATCGTCTTCTGGAAGCGCCAAA
TGTGGAAGACATCCGTTTCAAAATCCTTGGCACAATAAAAGATGTGttta
aaacaattttggatTATTTGTTTTACTTAAAGAAGTTCTTTATCGTTATA
TCATTACTGTTGTTGACGATTGATTCAGTTCGGTATCTGAAACAGTACTT
CACCGACAACGCATTCGATAATATGTTTGCTGATGATAATCTCCGACGTT
TATGGTGGGAAAACGGAAATGTCTTTGAAAAGTTGACACCGCTCCGTCGA
TGGGAAATCGAGATGAAATACCAGGTCACCGCTTCTGTGAGGTTGTCAAA
GAGTGAAATCCAAACCATGATTTTGAAATCGTTGACAGCAGTTATTGTGA
TCGCCATCTCAGTATTTGTTATCCTCGGAGATTTCGCTTTCAAGGAATTG
TTAAACACGCTAGCATCAAATGCTGGTTTCGCGATCGGTTTCAAAGGGAT
GGAACAGAGTATAGTTGCTGATGTCAAACTAGGTGGCCGCGAGAAGAAAG
TGGTTTTGCAGAAATTGAATATACAACGGTTCAATGTGAGCATTGATCCG
TGTTTGCCGAGCCCGATGAAGACGGAAGGTCAGACGATTATTATTCTTAC
CGTTATCCTTGTTATCGTTCTCTTGTCGTGCATTTTCGATGCGTACGCGT
TGCGATTACGTGCGAGAATCTGTAACTCGTTCTACCCGGATCGTGCCCAC
GAGAGAGCTGTGTATCTTCACAAACGCATTTTCACGGGTCGACATTCGAG
ACGAATCCAACTGCGAGCTGTCATCCTGAGGGAATTGCGACGACGAAAAT
TGACCGAGGAGTTTTCCTGGATGTTTAACATTCGGAAGATTTGTCGCAGA
GGTGGTGAACAGGAACAGACTGATTGTTACGCATGTTTTCAAGGGTTTGG
TAAGGTTGGTTCGGAAGATGTCGAAGTGAGGGATAATGACGGATCCAAAA
TCAGATGTAAAATTTGTAAAGATTGTCACAAAGACtttcaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031859XLOC_031859Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050321-proteinTCONS_00050321-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050321-exon-scaffold_169-1491911889:404373..406029TCONS_00050321-exon-scaffold_169-1491911889:404373..406029Clytia hemisphaericaexon
TCONS_00050321-exon-scaffold_169-1510915933:404373..406029TCONS_00050321-exon-scaffold_169-1510915933:404373..406029Clytia hemisphaericaexon
TCONS_00050321-exon-scaffold_169-1575043694:404373..406029TCONS_00050321-exon-scaffold_169-1575043694:404373..406029Clytia hemisphaericaexon
TCONS_00050321-exon-scaffold_169-1491911889:408416..409495TCONS_00050321-exon-scaffold_169-1491911889:408416..409495Clytia hemisphaericaexon
TCONS_00050321-exon-scaffold_169-1510915933:408416..409495TCONS_00050321-exon-scaffold_169-1510915933:408416..409495Clytia hemisphaericaexon
TCONS_00050321-exon-scaffold_169-1575043694:408416..409495TCONS_00050321-exon-scaffold_169-1575043694:408416..409495Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_169supercontigscaffold_169:404373..409495 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0136853 0 0 0.074407 0.0299104 0.118228 0.0337829 0.0619936 0.0878913 0.0284365 0.0654256 0.0856226 0.0635142 0 0.00855187 0.052676 0.0323947 0 0.031222 0.0271376 0.0198551 0.463928 1.09718 0.497231 0.211479 0.0577299 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012858DC_STAMP-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top