TCONS_00050241 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050241
Unique NameTCONS_00050241
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1525

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050241 ID=TCONS_00050241|Name=TCONS_00050241|organism=Clytia hemisphaerica|type=transcript|length=1525bp
ATCCACTGTGTTTTAGGGCAAAATGGAGAGGTtacaagttttgatttttg
tgcttTCTCAATTTGCTCTTACCCTTGCAATCGAACCTTCATCTTTTATA
CCAACAAGTTATGAAGCTCTCGGAAAGAAGGTGGTCTTGAAAACATACCA
AGATGGTTCATACATCAACTGCGCGCAAAGATGTAAACGTCTGTTGAAAT
GCACCGACATCGCGCATCTAAAGATTGCGGATAATGAAGGTCAGTGTATT
TTACTGACCAACATCGAGAGAGCAAAATGTCAGCAAACGAAGGATGGAAG
TTACATTTTGATGGGTGATTATTCCGGTCCGTATAATACACGTCGTTTGT
GTCGCACGGAGGAAAATATCGAAACCAAACTGACAATCAAAGAGCCTGTT
TTGTTTGACGAGAAAGATCACAGTAAAAGAGgagaaaagtttgtttacat
ggTCAAGAAACCTCAATTTgAATTCAAGAGTTGCGAAGAAGCGTACAACC
AAGGTGAACGAACAAGTGGTTTGTACTACCTCACTGATGCATACTCAGAC
AATGATTTAAGATGGCATTATTGCAACATGGACATGTTGGGAGCGTGTGG
TTCTGGAGGATGGACATTAGCCATGCTTGCAGATGGAACTCAGAAAGAAT
TCAAGTACGATGAGATCTATCTATGGGAGTATGATACTCTTCTGAATGAA
ACTGAAGGTTTGAAGGATCCGCTGACCATCTCTGCCAAATACGAAGCCTT
TAATCTTCTACCATTCAAATCGATCTGCATTGGAATGAAGGCTAAAGGGG
AGGAGACAGGCTATGTTCGGCTACCGGTAGCTTATTCATCGCTCAGTTAC
TTTTTCTTCGTGTTTAATTACACGGTACCGTATCAAACAGACGTCCCTCT
TGATGAATGGAGCGAGTTGATCAAAATGCCTGAAATGACGGATAAATGTC
CATCCAGACAAGGCTTCAATTTCCTGCAGCGCTGGGGAACTTTTCGAATC
GGGATTGCAACCAACGAGAATGATTGCACTGTGAACTTCAGCTCGACCAT
GGTTGCAATCGGAATCCGAAAACCAATGTGGTGCCACAAGCTGGTTGAAG
ATTATTCTGGTGGATATGAATTTTGTTCACCTGTCAATGGAAAAAATTAT
CTCAAACCAGCTCTTACTTACAtttacttgaaataaaaattcgaTTAAAG
CCATTTGAAGATACAATGTAAACAAAACCAAGAATTCTTTTTCGGAAATA
TTCGAAACATTCCACAACTTGAATCCTTGAGATTTGGGAAACAGACACCA
AAAAAAGACgagttaaatttattttatattttttatcttttgcaTTTTAT
CTTTAATCACTATCGCTAAGCATTCATATTTACACGCCCATCCACCAACA
ACTTATCTTTCATGTAAACGTTTTGACAAAGTTTGGGATTTTCACAAGAT
TGAAAATCATCAAATGCAGTTAAACTACTTATCTTTAATACCCTGAAGTG
GATGAATTTCTGTGTGGACTTTTTT
Run BLAST on NCBI

protein sequence of TCONS_00050241-protein

>TCONS_00050241-protein ID=TCONS_00050241-protein|Name=TCONS_00050241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
MERLQVLIFVLSQFALTLAIEPSSFIPTSYEALGKKVVLKTYQDGSYINC
AQRCKRLLKCTDIAHLKIADNEGQCILLTNIERAKCQQTKDGSYILMGDY
SGPYNTRRLCRTEENIETKLTIKEPVLFDEKDHSKRGEKFVYMVKKPQFE
FKSCEEAYNQGERTSGLYYLTDAYSDNDLRWHYCNMDMLGACGSGGWTLA
MLADGTQKEFKYDEIYLWEYDTLLNETEGLKDPLTISAKYEAFNLLPFKS
ICIGMKAKGEETGYVRLPVAYSSLSYFFFVFNYTVPYQTDVPLDEWSELI
KMPEMTDKCPSRQGFNFLQRWGTFRIGIATNENDCTVNFSSTMVAIGIRK
PMWCHKLVEDYSGGYEFCSPVNGKNYLKPALTYIYLK
Run BLAST on NCBI

transcript from alignment at scaffold_168:146470..152032-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050241 ID=TCONS_00050241|Name=TCONS_00050241|organism=Clytia hemisphaerica|type=transcript|length=5563bp|location=Sequence derived from alignment at scaffold_168:146470..152032- (Clytia hemisphaerica)
ATCCACTGTGTTTTAGGGCAAAATGGAGAGGTTACAAGTTTTGATTTTTG
TGCTTTCTCAATTTGCTCTTACCCTTGCAATCGAACCTTCATCTTTTATA
CCAACAAGTTATGAAGCTCTCGGAAAGAAGGTGGTCTTGAAAACATACCA
AGATGGTTCATACATCAACTGCGCGCAAAGATGTAAACGTCTGTTGAAAT
GCACCGACATCGCGCATCTAAAGATTGCGGATAATGAAGGTCAGTGTATT
TTACTGACCAACATCGAGAGAGCAAAATGTCAGCAAACGAAGGATGGAAG
TTACATTTTGATGGGTGATTATTCCGGTCCGTATAATACACGTCGTTTGT
GTCGCACGGAGGAAAATATCGAAACCAAACTGACAATCAAAGAGCCTGTT
TTGTTTGACGAGAAAGATCACAGTAAAAGAGGAGAAAAGTTTGTTTACAT
GGTCAAGAAACCTCAATTTGGTAAGTTTCATTTTTTATCCATTCTTAAAT
GTCCGATTTGTATATTCATTTTTAGCATATTGGACTGTTCCAGAAAAGAT
TTGAATATGGGGGATGAAGGATATAAACATTTTTTAGAAATTTACCTCGA
ACATTGTGAATTTTGACCCCCTGGACATTCAAAACCCCCATGTACGGACA
TTCTCTGGAAGAGCCCATTGGCTTAATTTTGAGAGCTGAAACTTTCTCGA
ATTTCGAAAGAAACATATTTCTCGTGTGCTGTCCTGTAATTTTCGAAAGC
GTTTTCATATTTCTTTAAAGTCCCTCATTGGAGAGGATTGATAGTCGGTA
TTTGATGTGCTGCATCCCTAGTCGACTCAACTACCATTCTGCGTAAATAG
ACCTGTTAATATTTCGGTTGAGAAAACTGGGTNACTCAACTACCATTCTG
CGTAAATAGACCTGTTAATATTTCGGTTGAGAAAACTGGGTGGGGCTCGG
CCTCCTACTGCAAAAATCTTAGGTGGATGGAAATTTCTGCATCTGGGTAC
ATGCCAGAAATTTGCTCTTCGTAGTAGAGCCTGATTTAAATGATATGACT
TTTGTTTTAAACATTTTAGTACATAATATCCACTATAACACCCGAGCAAT
TACCTCCCCGTGTTTTGAATCTCTAAAACCCAAAACAGACAGCGAATCAT
CACGCTCAAAAGTTTTTTTGTCCGCTTTTTTACAAAAATAGTGTTTATTC
CGTTTTATCATAGATATTAATCAACATGTTTAGAATCCATGGCAAACTCA
ATTTAATTTGTATTGTAGTACTAAGCACCTCTTTTACTTGCTCACTTCTA
TTGTACGTCCAAATCAGTAATATGACAATTTTGTGAAAGTCTTAAAGCAT
TACTGGGTAATGCTAAAAAATGCTCTAAAATAGCAATCATAGATTCAATA
TTCCATCAGCGGAAAAGCTTTCAAAATAAAATTCATCATTTTTATCTACG
GCTATTAGAATTCAAGAGTTGCGAAGAAGCGTACAACCAAGGTGAACGAA
CAAGTGGTTTGTACTACCTCACTGATGCATACTCAGACAATGATTTAAGA
TGGCATTATTGCAACATGGACATGTTGGGAGCGTGTGGTTCTGGAGGATG
GACATTAGCCATGCTTGCAGATGGAACTCAGGTAAGAATTTTTAAACTTT
CATAAAAAAGGGTTATTGAATGGCACGGTTTGGTTCATTTGATATGAGGA
AATTTTGACCGATTTTTGACGTTTAATTCCTTATCAATGTGACTGTTGAG
TGAAGAGTAGCATAAACCTAGCCTAGTGAGGAATCCAAAAAATACGTTTT
TGATGATGGTCGAAGTACCCAGAAATAGTGATAAGATACCCTAAACATAA
ACAAGGGGAAACAATGAAAAGGAGACAAATGTATAATTGTTAAATGAGAT
CTCTTGACTATAAAATGAAACGTAAGAAAGTGTGTTGGGTTTGGCGTGAC
ATTTGGGATGCATCGAGAGATAAATCTACTTAAAGCCTATAGCCGCGGAC
GGTTGTGAAGACCGCAACGAGAGCTGGAGCCGTGACGTGGATCTGAGCCT
ATCTGATCTGATGTAATAGAACTAGATGGGGTTTACGTGTAACCTGCACC
CCCCCCCTTAAGCTGTAAATACTACAAGGTTCTAGCCCTTAAACTGTAAG
TACTAAAAAGTTCTAGCCCTTAAGCTGTAAGTACTAAAAAGTTCTAGCCC
TAAACTGTAAGTACTAAAAAGTTCTAACCCTTAAACTGTAAGTACTAAAA
AGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGT
AAGTACTAAAAAGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAG
CCCTTAAACTGTAAGTACTAAAAAGTTCTATCCCTTAAACTGTAAGTACT
AAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAA
CTGTAAGTACTAAAAAGTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTT
CTATCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGT
ACTAAAAAGTTCTAGCCCTTAAACTGTAAATATTAAAAAGTTCTAGCCCT
TAAACTGTAAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAA
GTTCTAGCCCTTAAACTGTAAGTACTAAAAAGTTCTAGCCCTTAAACTGT
AAGTACTAAAAAGTTCTAGCCCTAAACTGTAAGTACTAAAAAGTTCTAAC
CCTAAATTGTAAGTACTAAAAAGTTCTAGCCTAGAAGTAAAAAACTTAAG
CCTTACAACAAGAGCCGGAGCCGTGATGTTGTTTAACCCCAAAGAGTGCA
ACGAGAGCCGGAGCCTCCACGTTGTTCTAAGAGGAGTAATCAAAGAAAAA
AGATAAAAAAAATAAAAATAGAAACCTTAGCCTATAACGAGAGCCGGAGC
CTCCCGTGTGACGTTGTTGAAAGGAGTAAAAGAAAAAAAGAACAAAAGCC
TATAACGAGAGCCGGAGCCATGACATTGTTATTAGGGTAACGGAGCGATG
AGAAAAGAGGTAAAAAAAAGGAAGGAAAAAAGGAAAACGACCCAAAAAAG
AAAACAATAAAAGAAAAACAAAACGAGCAACCTAACAAACACGTATTGAT
CGAGCTCAAGATGCATCCCAAACGACCTAATCCCTGGGCTAAAAAACCTG
TAGCGTGGAAAAACTAGGAAAAACCGCTGGGACTAGGATTGATCGAAATG
ACTTGGCGCGCGCTTCTTCTTCCCGCCGTCGGTGATGGTTGATCTGATGA
TTTTCTCTTCTATTTTTCCATGGAGGTAATAAGAAATAGATGGAGAATAA
ATGACTCGGTGATGGCCTAGTAAGTTATCGTTAATTTCTTTTATATTTTC
ATTCAAATCGGTTTTCTTTGATTTACTATCATTGGAAGCAAAAAAATCCG
AAATGTAAATTTATAAGAACAGAATTGAGAATGTTATCCTGATTGAAATA
AACATTTTATGCAAAAAGTTCTTGTTCAAACGCGATACAAAAATAATTTT
CTCGTAGTAAGGTTACAATAGTTCTATGATTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAACACCTT
TTTATTCAGTTTTTTATGAACTTAAATATTCCCATGAGTGCACACAAAAT
TAATCACTTTTTCCCATTGCAACCAAGGAGCCGTTTGCTTCCAATGATTA
GGTACAATGAAATAAAAGTCATTTATTCTCCATCTATTTCTTATTACCTC
CATGGAAAAATAGAAGAGAAAAAAAAACAGCGAAAGGAAATAAGTACAAG
TAAAAGGATCATAGGAATAAATAAGGGTGTCAGGGAGGGTGGGAGGCAAA
AATATTTGTGTTGACTGAATGAGGGGATGAAGTGAACTGAATGACCGAAC
TCAAACGCTACAAGTCGGAGTCCGTGGGACTGGGACTGGGACGAGTGGGA
GTGGGCGTGCAGTTTTAACACGCCATATGATGCCGGGCGTTTGATTTGCT
GATTGCAGAATTAACATGAGCTAAAATTTAGCTCTAAATATACACACCCC
TCAAAGTGGCTAACGAACAAACGCATTAAGTCTAAAGATCGAAATTGCAA
AGTAATTATAGGAATCAAGAGCGAAACAGCTTTGAAAGCAGTCTAAATAT
AATGTTCTTTTAAATCCATTAAATGCAGCACGCCACGGTGTAGGTTTACT
CTATTTATGTTCTTCTTGGTGTAATTTTTAGAAAGAATTCAAGTACGATG
AGATCTATCTATGGGAGTATGATACTCTTCTGAATGAAACTGAAGGTTTG
AAGGATCCGCTGACCATCTCTGCCAAATACGAAGCCTTTAATCTTCTACC
ATTCAAATCGATCTGCATTGGAATGAAGGCTAAAGGGGAGGAGACAGGCT
ATGTTCGGCTACCGGTAGCTTATTCATCGCTCAGTTACTTTTTCTTCGTG
TTTAATTACACGGTACCGTATCAAACAGACGTCCCTCTTGATGAATGGAG
CGAGTTGATCAAAATGCCTGAAATGACGGATAAATGTCCATCCAGACAAG
GCTTCAATTTCCTGCAGCGCTGGGGAACTTTTCGAATCGGGATTGCAACC
AACGAGAATGATTGCACTGTGAACTTCAGCTCGACCATGGTTGCAATCGG
AATCCGAAAACCAATGTGGTGCCACAAGCTGGTTGAAGATTATTCTGGTG
GATATGAATTTTGTTCACCTGTCAATGGAAAAAATTATCTCAAACCAGCT
CTTACTTACATTTACTTGAAATAAAAATTCGATTAAAGCCATTTGAAGAT
ACAATGTAAACAAAACCAAGAATTCTTTTTCGGAAATATTCGAAACATTC
CACAACTTGAATCCTTGAGATTTGGGAAACAGACACCAAAAAAAGACGAG
TTAAATTTATTTTATATTTTTTATCTTTTGCATTTTATCTTTAATCACTA
TCGCTAAGCATTCATATTTACACGCCCATCCACCAACAACTTATCTTTCA
TGTAAACGTTTTGACAAAGTTTGGGATTTTCACAAGATTGAAAATCATCA
AATGCAGTTAAACTACTTATCTTTAATACCCTGAAGTGGATGAATTTCTG
TGTGGACTTTTTT

Coding sequence (CDS) from alignment at scaffold_168:146470..152032-

>TCONS_00050241 ID=TCONS_00050241|Name=TCONS_00050241|organism=Clytia hemisphaerica|type=CDS|length=3492bp|location=Sequence derived from alignment at scaffold_168:146470..152032- (Clytia hemisphaerica)
AAAGAATTCAAGTACGATGAGATCTATCTATGGGAGTATGATACTCTTCT
GAATGAAACTGAAGGTTTGAAGGATCCGCTGACCATCTCTGCCAAATACG
AAGCCTTTAATCTTCTACCATTCAAATCGATCTGCATTGGAATGAAGGCT
AAAGGGGAGGAGACAGGCTATGTTCGGCTACCGGTAGCTTATTCATCGCT
CAGTTACTTTTTCTTCGTGTTTAATTACACGGTACCGTATCAAACAGACG
TCCCTCTTGATGAATGGAGCGAGTTGATCAAAATGCCTGAAATGACGGAT
AAATGTCCATCCAGACAAGGCTTCAATTTCCTGCAGCGCTGGGGAACTTT
TCGAATCGGGATTGCAACCAACGAGAATGATTGCACTGTGAACTTCAGCT
CGACCATGGTTGCAATCGGAATCCGAAAACCAATGTGGTGCCACAAGCTG
GTTGAAGATTATTCTGGTGGATATGAATTTTGTTCACCTGTCAATGGAAA
AAATTATCTCAAACCAGCTCTTACTTACATTTACTTGAAATAAAATTCAA
GAGTTGCGAAGAAGCGTACAACCAAGGTGAACGAACAAGTGGTTTGTACT
ACCTCACTGATGCATACTCAGACAATGATTTAAGATGGCATTATTGCAAC
ATGGACATGTTGGGAGCGTGTGGTTCTGGAGGATGGACATTAGCCATGCT
TGCAGATGGAACTCAGATGGAGAGGTTACAAGTTTTGATTTTTGTGCTTT
CTCAATTTGCTCTTACCCTTGCAATCGAACCTTCATCTTTTATACCAACA
AGTTATGAAGCTCTCGGAAAGAAGGTGGTCTTGAAAACATACCAAGATGG
TTCATACATCAACTGCGCGCAAAGATGTAAACGTCTGTTGAAATGCACCG
ACATCGCGCATCTAAAGATTGCGGATAATGAAGGTCAGTGTATTTTACTG
ACCAACATCGAGAGAGCAAAATGTCAGCAAACGAAGGATGGAAGTTACAT
TTTGATGGGTGATTATTCCGGTCCGTATAATACACGTCGTTTGTGTCGCA
CGGAGGAAAATATCGAAACCAAACTGACAATCAAAGAGCCTGTTTTGTTT
GACGAGAAAGATCACAGTAAAAGAGGAGAAAAGTTTGTTTACATGGTCAA
GAAACCTCAATTTGAAAGAATTCAAGTACGATGAGATCTATCTATGGGAG
TATGATACTCTTCTGAATGAAACTGAAGGTTTGAAGGATCCGCTGACCAT
CTCTGCCAAATACGAAGCCTTTAATCTTCTACCATTCAAATCGATCTGCA
TTGGAATGAAGGCTAAAGGGGAGGAGACAGGCTATGTTCGGCTACCGGTA
GCTTATTCATCGCTCAGTTACTTTTTCTTCGTGTTTAATTACACGGTACC
GTATCAAACAGACGTCCCTCTTGATGAATGGAGCGAGTTGATCAAAATGC
CTGAAATGACGGATAAATGTCCATCCAGACAAGGCTTCAATTTCCTGCAG
CGCTGGGGAACTTTTCGAATCGGGATTGCAACCAACGAGAATGATTGCAC
TGTGAACTTCAGCTCGACCATGGTTGCAATCGGAATCCGAAAACCAATGT
GGTGCCACAAGCTGGTTGAAGATTATTCTGGTGGATATGAATTTTGTTCA
CCTGTCAATGGAAAAAATTATCTCAAACCAGCTCTTACTTACATTTACTT
GAAATAAAATTCAAGAGTTGCGAAGAAGCGTACAACCAAGGTGAACGAAC
AAGTGGTTTGTACTACCTCACTGATGCATACTCAGACAATGATTTAAGAT
GGCATTATTGCAACATGGACATGTTGGGAGCGTGTGGTTCTGGAGGATGG
ACATTAGCCATGCTTGCAGATGGAACTCAGATGGAGAGGTTACAAGTTTT
GATTTTTGTGCTTTCTCAATTTGCTCTTACCCTTGCAATCGAACCTTCAT
CTTTTATACCAACAAGTTATGAAGCTCTCGGAAAGAAGGTGGTCTTGAAA
ACATACCAAGATGGTTCATACATCAACTGCGCGCAAAGATGTAAACGTCT
GTTGAAATGCACCGACATCGCGCATCTAAAGATTGCGGATAATGAAGGTC
AGTGTATTTTACTGACCAACATCGAGAGAGCAAAATGTCAGCAAACGAAG
GATGGAAGTTACATTTTGATGGGTGATTATTCCGGTCCGTATAATACACG
TCGTTTGTGTCGCACGGAGGAAAATATCGAAACCAAACTGACAATCAAAG
AGCCTGTTTTGTTTGACGAGAAAGATCACAGTAAAAGAGGAGAAAAGTTT
GTTTACATGGTCAAGAAACCTCAATTTGAAAGAATTCAAGTACGATGAGA
TCTATCTATGGGAGTATGATACTCTTCTGAATGAAACTGAAGGTTTGAAG
GATCCGCTGACCATCTCTGCCAAATACGAAGCCTTTAATCTTCTACCATT
CAAATCGATCTGCATTGGAATGAAGGCTAAAGGGGAGGAGACAGGCTATG
TTCGGCTACCGGTAGCTTATTCATCGCTCAGTTACTTTTTCTTCGTGTTT
AATTACACGGTACCGTATCAAACAGACGTCCCTCTTGATGAATGGAGCGA
GTTGATCAAAATGCCTGAAATGACGGATAAATGTCCATCCAGACAAGGCT
TCAATTTCCTGCAGCGCTGGGGAACTTTTCGAATCGGGATTGCAACCAAC
GAGAATGATTGCACTGTGAACTTCAGCTCGACCATGGTTGCAATCGGAAT
CCGAAAACCAATGTGGTGCCACAAGCTGGTTGAAGATTATTCTGGTGGAT
ATGAATTTTGTTCACCTGTCAATGGAAAAAATTATCTCAAACCAGCTCTT
ACTTACATTTACTTGAAATAAAATTCAAGAGTTGCGAAGAAGCGTACAAC
CAAGGTGAACGAACAAGTGGTTTGTACTACCTCACTGATGCATACTCAGA
CAATGATTTAAGATGGCATTATTGCAACATGGACATGTTGGGAGCGTGTG
GTTCTGGAGGATGGACATTAGCCATGCTTGCAGATGGAACTCAGATGGAG
AGGTTACAAGTTTTGATTTTTGTGCTTTCTCAATTTGCTCTTACCCTTGC
AATCGAACCTTCATCTTTTATACCAACAAGTTATGAAGCTCTCGGAAAGA
AGGTGGTCTTGAAAACATACCAAGATGGTTCATACATCAACTGCGCGCAA
AGATGTAAACGTCTGTTGAAATGCACCGACATCGCGCATCTAAAGATTGC
GGATAATGAAGGTCAGTGTATTTTACTGACCAACATCGAGAGAGCAAAAT
GTCAGCAAACGAAGGATGGAAGTTACATTTTGATGGGTGATTATTCCGGT
CCGTATAATACACGTCGTTTGTGTCGCACGGAGGAAAATATCGAAACCAA
ACTGACAATCAAAGAGCCTGTTTTGTTTGACGAGAAAGATCACAGTAAAA
GAGGAGAAAAGTTTGTTTACATGGTCAAGAAACCTCAATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031826XLOC_031826Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050241-proteinTCONS_00050241-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050241-exon-scaffold_168-1575043694:151563..152032TCONS_00050241-exon-scaffold_168-1575043694:151563..152032Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1575043694:150402..150574TCONS_00050241-exon-scaffold_168-1575043694:150402..150574Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1575043694:146470..147351TCONS_00050241-exon-scaffold_168-1575043694:146470..147351Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1510915933:151563..152032TCONS_00050241-exon-scaffold_168-1510915933:151563..152032Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1510915933:150402..150574TCONS_00050241-exon-scaffold_168-1510915933:150402..150574Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1510915933:146470..147351TCONS_00050241-exon-scaffold_168-1510915933:146470..147351Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1491911889:151563..152032TCONS_00050241-exon-scaffold_168-1491911889:151563..152032Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1491911889:150402..150574TCONS_00050241-exon-scaffold_168-1491911889:150402..150574Clytia hemisphaericaexon
TCONS_00050241-exon-scaffold_168-1491911889:146470..147351TCONS_00050241-exon-scaffold_168-1491911889:146470..147351Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_168supercontigscaffold_168:146470..152032 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0808763	0.131445	0	0.0597261	9.30699	5.60206	12.4082	14.2122	7.38323	11.706	4.06961	3.64474	10.2198	7.4852	0.367394	0.0657117	0.263092	0.352633	25.5627	31.3078	1.09474	0.915388	0.432746	0.224816	0.0868333	0	0.221795	0.197255	0.0897664	0.182916
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
IPR002181Fibrinogen_a/b/g_C_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00050241 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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