TCONS_00050015 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050015
Unique NameTCONS_00050015
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2261

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050015 ID=TCONS_00050015|Name=TCONS_00050015|organism=Clytia hemisphaerica|type=transcript|length=2261bp
cgagaataggcctctgaAGCCTCCTGCAACccaaccaaatagaaaaaaaa
agtctctctaaaaaagtctaaaagttattttttctaaaatattgagcttg
gatatccaggctaggcatacacttgcttataaaaataacatGTACTTTAC
CTACACCCTAGATTTACATTGTTTATGCTGAATAAAAACTCACAGCTAGC
TTACCTACGACTTCTTCCGACGTTTGAGATGAGgaattaaaactaaaaaa
aagataaattttgatctttcaccGCAGTTCGAGTCTACCATTTTGGATTG
AGGTTTTTTAACAATGATGtaccaaattttgaatattatgGAGATAAGAG
CATTTGCCTTCTCTCTATGATTCTCTAAAATTTATTATCTCCTTCATCAT
TATGTTCCTTTTTTACGGTAGCGACTTTTATAAACAAAGTGAAAGTATCC
AAGGAACGGTCGTAAACAAacacaaattttgaaataaagagCCTCTCTTC
AccaaaaatttatcaaatgatCAGGCAGTTTCAAGTCACCACACCATTCG
TATTAATATCTTAGCTTGATCAAGCGATTACAGACAACATATAAAAATGT
ACAAACTTGATTTGCCAATCGATTTACGTGAATCTGCTGCGATCGAGAGA
AGAAGGATCAAAGAGCAGCAAAGACAAAGTAGAATTTTCAATGCTCGTGT
GCGAACTATTGGTGTTGATTTACAATCACTTGAGCAACAAGTTGGGGAAC
GAAAATGGATGGAAGATCAAGAAAGAAGACGTCATGAAGCATTTGCAAAT
GATATGGCTATGAATGACCGGATTTGTGTCTTACTTCAAAAACGACAAGA
CCAAGACGTCAAAGCTTTAGAAAAGTCAACCAACGAGTTTCGTAAAGAGC
ACCAACGACCTGAAGATCGTCGTGAATTCGATATTTATGATCCTGATGGT
AAAAAGAAGGATACTCCAGCTCGTGTGTCAGATGATGACCCACGATGTGG
TATTTCTAGTTTACAAAAATTTCTTGGTGAAGATCTAAATGAGAAAGCAA
GAAAGAAATTACAACAAGAACAGAACAGGGAGTGGTTCACATCACAAATG
AACGAACGAGCACAAGAAGACGCCAATCGTGGACAAGCTGATAGACTTCA
TGAACTCAAAAGCATCGAGATGGATCAACGTGCAATGGACCTTGCTCGTG
CTGAAGATGAGTGCCGTGATGCTGTCAATATGGCTACTAAGGAATACAAT
CTTGCTTTAGCACGTGAGcgaaaatctaaagaaaatgcCGATCACCAAAA
AGAGTTAGAAGATAATCTAACGGAAATTTCAAATCACGTCAATGGAGATA
TGTTGACTGAAAATCCAGCAGTCGCTCAAAGTGCGTTTGGATCACATCGT
GTCATCTCAGATCGATGGAAAGGAATGAGTCCAACACAAGTCAATGACGT
TCTTCAAACACAACATCAACAAGTAGAAGAAAACATGAGAAAACGAGATG
AAGCAAATAAGCAAGAAGAGGAATGGAACGAGAATATGCTTCGAAACGCA
CGTGCCGCAGTCATGATGGAACGACAACAAGAACGAACACGTAAAGAGTT
ACTTCGTCAACAAGCACTTGAAAATCAACGACTAGCCGGTGAACAAAAAG
CCAAATTGGACGATATCAACAAGAATGTATACACTAACCAACCGACAGCT
GCTTACTTCATGCAGTTCAATACCTCTAGTCGATAGCCTGAtcaaaatat
actttttttaacctttcctCTATGTAAATAATAGCTACGTaaattttaat
cataatgaaatttttttatatttccaaTAATAAATTACCAATTAGTTTCT
TAAAAATACCCTTGTCGTTTATTTGTGGGTCCATTAAATGGGTCTGATCC
ATTAAATCTGAACAATGGAATTACCATTTGTTAATGACTACTCTCCCGAT
TATCAATAGCATTACAttataataaatcaaaaaagatttctatAGTATCA
CTTTatagtactttaatgggatatactttcacggggattaaatttcgccg
attttgcggatttgggtgtcatccgcgaaaatccgcgaaattaagtccca
ttggaaatttggaagggcctcatccgcgaaatatttctaaacaatactca
aaatatgtcaaataaatactatttgaatggttacttgtatcaaagaagcg
caaataatgtgtatttcaacaaccaacatgcatgatttgacagtagaAGT
CACAAAaccgt
Run BLAST on NCBI

protein sequence of TCONS_00050015-protein

>TCONS_00050015-protein ID=TCONS_00050015-protein|Name=TCONS_00050015-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
MYKLDLPIDLRESAAIERRRIKEQQRQSRIFNARVRTIGVDLQSLEQQVG
ERKWMEDQERRRHEAFANDMAMNDRICVLLQKRQDQDVKALEKSTNEFRK
EHQRPEDRREFDIYDPDGKKKDTPARVSDDDPRCGISSLQKFLGEDLNEK
ARKKLQQEQNREWFTSQMNERAQEDANRGQADRLHELKSIEMDQRAMDLA
RAEDECRDAVNMATKEYNLALARERKSKENADHQKELEDNLTEISNHVNG
DMLTENPAVAQSAFGSHRVISDRWKGMSPTQVNDVLQTQHQQVEENMRKR
DEANKQEEEWNENMLRNARAAVMMERQQERTRKELLRQQALENQRLAGEQ
KAKLDDINKNVYTNQPTAAYFMQFNTSSR
Run BLAST on NCBI

transcript from alignment at scaffold_167:107777..117958-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050015 ID=TCONS_00050015|Name=TCONS_00050015|organism=Clytia hemisphaerica|type=transcript|length=10182bp|location=Sequence derived from alignment at scaffold_167:107777..117958- (Clytia hemisphaerica)
CGAGAATAGGCCTCTGAAGCCTCCTGCAACCCAACCAAATAGAAAAAAAA
AGTCTCTCTAAAAAAGTCTAAAAGTTATTTTTTCTAAAATATTGAGCTTG
GATATCCAGGCTAGGCATACACTTGCTTATAAAAATAACATGTACTTTAC
CTACACCCTAGATTTACATTGTTTATGCTGAATAAAAACTCACAGCTAGC
TTACCTACGACTTCTTCCGACGTTTGAGATGAGGAATTAAAACTAAAAAA
AAGATAAATTTTGATCTTTCACCGCAGTTCGAGTCTACCATTTTGGATTG
AGGTTTTTTAACAATGATGTACCAAATTTTGAATATTATGGAGATAAGAG
CATTTGCCTTCTCTCTATGATTCTCTAAAATTTATTATCTCCTTCATCAT
TATGTTCCTTTTTTACGGTAGCGACTTTTATAAACAAAGTGAAAGTATCC
AAGGAACGGTCGTAAACAAACACAAATTTTGAAATAAAGAGCCTCTCTTC
ACCAAAAATTTATCAAATGATCAGGCAGTTTCAAGTCACCACACCATTCG
TATTAATATCTTAGCTTGATCAAGCGATTACAGACAACATATAAAAATGT
ACAAACTTGATTTGCCAATCGATTTACGTGAATCTGCTGCGATCGAGAGA
AGAAGGATCAAAGAGCAGCAAAGACAAAGTAGAATTTTCAATGCTCGTGT
GCGAACTATTGGTGTAAGTATCCTTCTTTTAGTTTGGTCATTATATTTGA
TGATTGATGATTTCCTTTTCCCGTTAGTTGATATAATTGTATTTAAATTC
GATTGTTGAATGCAATTGAATCTCAATACACCGTTTAGGAGTCTCGCCAT
TTCACGGTACTCCATTGCAGAGGCCCGGTAAAAATGGTAGGTAAAAATGC
GCACTTTAGTACTGTGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNACTGAAAAAGGGAAAAAAGGAAGAAAACTGGGAACTTTATTTTTTCA
TTAAAAGTTTCTTCAATCTTTGAAGACAAAATTGACCCATGGAAAAAAAT
TTTATCTATGCAGTTCTTTGAAATGAAGCAAAATATTTCCAACCTGGTTC
AATTAAACTGGGTATTTGGCGCTATTACGTCACTTTCGTTTTCGACCCCG
TTCATTTGCCAATGGTCGCAAGTGAAAAATACCCCGTTCATTTGCCAATG
GTCGCAAGTGAAAAATACCCCGTTCATTTGCCAGGATGTGCCTGACTGAC
CAACAGGGAAGTAAAGGTTGGGCAAGTTTATTATACCGCCAACTACTCTA
AAACTTGGGACGATAGGTCGAAACATGGGACTGTTGCATATCTGGACTGT
ATTTTTACTTACTGTAAAATCGAAAGAGAAATCGTGTATTTTTAAATACG
CCGTTCCTTAACTCAAATCAGTCCCATGTTAATTGTCAGATAGTCCCAAG
TTAGAGCAGTTGACGGTAGTTCACACCCTCCTCCTTTATAAGAGAAGGCG
GCAGGGATGTTATATTTCTTGTAGAAAGGGGTCGACATTTTCAAAAAGAG
GTTCATCTAGAAAAGGGGGTTAACGTGTTAGCAAAGTTCTTTGGACTTTC
TAGCTTTCACACTGGATTAAAATCTTAAAAAGTTAAAATTTTCTTGCTCA
CTTTGCTTGCAATCTATTTGAACCAATTTTTAGTTAATATGGATGGTGCA
TAATGTCTTGAAAGTGGGGGGAAATCCTTATGACACCCCAGTTTTGAGTT
CCTTCAAATTTTGAATAGGGGTAGAACCTAGAGTAAGAAGGGGGATTGCT
CTAGACTAGGGGGGGTAGAAATCCCCTTGAAGGGAAATATGAAGTTCATT
TTTCAAAGCTTTAACATGAATGAACCTGACTATAGGATAAAACACAAAGA
GCTGAACAAGAAAATGGGGTCATATTTTAGGTCATATTATTTTGTTTCTG
ATCGCCCCAATTAATTGCAGAGTAAGGGCTCGTTAAATTCATTCAATTGC
TCCTCAGCTTTTTGGCTGAAGTTAAAATTTTTCTTCAGATTTCTGAAGGA
TTTTGACACTACTGTAGAAATCCTTGAACAAGTTAGCAAAAATATTGGAT
GATGGTGGTTTGTTATGTTTCCACTTTTAGACACTATAAAATTTCAAAGG
CATCATTTACTCTTTATATGAAAATATTGAATTTCTAGGTTGATTTACAA
TCACTTGAGCAACAAGTTGGGGAACGAAAATGGATGGAAGATCAAGAAAG
AAGACGTCATGAAGCATTTGGTGAGTATCGAATATTATTTTAATATGAAG
GCTGATTCGAGGTGAAGTCTTATTTTATCCACCTGTATAAAACGTCAAAA
AAGTCAAACAGTTTTAGCATTTTTCTGAGCTTAATGAGATCCTCGTTTTT
TTAACTATGAAAACGTCTTTTACATTTATATATATAATTTACAATGTATA
TCAATGTGCCCTCCCGGTTATTACCATAATGGCTTTATGGCAACTCCTGA
ACTTGGGCACAGGATGTACGGTTTATATATATATTCTTTTGTTGGTGAAC
TTCTCAGGATTGCTCGTTCTACGTTACTTTTCGAGGACTTGAAAGTTAAA
GCCAAAGTTTTTATACAAAGAATGCGATGTCAAGGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTCTAGATTTTTGTTGTATTTGTATTGTCTTTT
TGTTTTGTGGGTTTTTGTCTTTATTGTTTCCATTTTGAGTAGTTGAAGGT
TTTATACTTCTAGACTATATATGAAAATAAAATGTTTTCTCCTGTATATT
TATATTTATATTTTATCAATTTCTACTCATACGCTCATACGTTTAGAACA
AGGGGAAGGGTCGTATAAACGAGGAGGCTGGACAATTCCCAAATCTTTTA
TAATTGGGAAAAACTGTTATTTTTAGCAAATGATATGGCTATGAATGACC
GGATTTGTGTCTTACTTCAAAAACGACAAGACCAAGACGTCAAAGCTTTA
GAAAAGTCAACCAACGAGTTTCGTAAAGAGCACCAACGACCTGAAGATCG
TCGTGAATTCGATATTTATGATCCTGATGGTAAAAAGAAGGATACTCCAG
CTCGTGTGTCAGATGATGACCCACGATGTGGTATTTCTAGTTTACAAAAA
TTTCTTGGTGAAGATCTAAATGAGAAAGCAAGAAAGAAATTACAACAAGA
ACAGAACAGGTAATATTTTTTATTGGTCACTATTTGTCATTTTTATTATT
TTTCGTTAAGTTGAACAGAGTTGAAAGACTACCTTCTAATTACCTCTGTA
TCAATTTTGGTACTTATTAAATTTGGCCGTCAAAAGTTTTCAAGGATATT
TAGTTCTAATTTGTGGGCTTTTAATTTGCAGTATTTTACTAGGAACTGCT
TATTCTAATTCCTGACTAGATTAATACACTTTAGATAGCTTTATATCTAA
GCAAATAAAATAGTGACATTCTCAAACCATTCTTTATCAGGGAGTGGTTC
ACATCACAAATGAACGAACGAGCACAAGAAGACGCCAATCGTGGACAAGC
TGATAGACTTCATGAACTCAAAAGCATCGAGATGGATCAACGTGCAATGG
ACCTTGCTCGTGCTGAAGATGAGTGCCGTGATGCTGTCAATATGGCTACT
AAGGAATACAATCTTGCTTTAGCACGTGAGCGAAAATCTAAAGAAAATGC
CGATCACCAAAAAGAGTTAGAAGATAATCTAACGGAAATTTCAAATCACG
TCAATGGAGATATGTTGACTGAAAATCCAGCAGTCGCTCAAAGTGCGTTT
GGATCACATCGTGTCATCTCAGATCGATGGAAAGGAATGAGTCCAACACA
AGTCAATGACGTTCTTCAAACACAACATCAACAAGTAGAAGAAAACATGG
TATGTACTGTACTTTACATTTCTCTCCTCCAGAATAATACACGCTTTTTT
TATAAGAATATTTATGATGAAATGGGCAAAAGAATTAAGAATATGGTAAG
AATATTACCATGATGGAATTTGGGCTACAGAATCTGATTGCCCTATTTAG
AGCATTTTACCATTAAAAATTGCCAATTATCCTGCAGTAATGCTAAAGGG
TTCCACAAAAATGCGAGTCCTTTGCCTGAGGTATGTATTACATGCTAGAT
TTTTGCCTGGGTTTGGATTTAAATCTAAGAATACTCTAAGAATATTTCAG
GATGATTTTTCCCAAAAAGTTAAGTATATTCATGATGAATTGGAAAAACG
CCATTCTTATAAAAAAAGCGTGTATTCGTTCAAGAAGCAAAAAAAAACGT
TTATCATAACAAATCATGGGAAAAGAACTACGTTCTTGAAGGTAATGACT
ATCACTAGCCGTATGCGCAGCGTCGCAAGCTGCGTGTCCCAATTTAGCAA
ATCACTATACATCTAAAAAAACTCTAACGGAAGAAAGATAGCTGCCCATT
GATGATTAGATTTTGACTTTATAAAGGAGAAAAAAGACAACATTGCATTG
CAATTTTTAACCACAATTAAGTAAATGGCTTAGAAGAATTATATTTTAGA
TCTATTTAGCCATCGTTGCAAGACATTCGCGAGTGACTTTGACAGACTTT
AAAAAGTATAGAAAGTGATAGAGAGGGTCGCTATTGTAAACAGAAAGTTT
TAAAGAGCATCTGAAAAATTAAGAATGAAAAATTATATTTGAGAAGAAGG
TTGATTTTTACCCATCCAGCTCCCAGGCACCTGTATAGAAAATAGCATCT
TGGCGTCTCAAAGTTATTCTAGTGATAGGAAATCTGCATAAGGTGCAAAA
ACATGATGGTTCAATGCCATAAAGAGGAGGCTTTGTAGAGCTTTTTTAGA
TTTTCGAAAACTTTTTANCAAAAAGAGTTAGAAGATAATCTAACGGAAAT
TTCAAATCACGTCAATGGAGATATGTTGACTGAAAATCCAGCAGTCGCTC
AAAGTGCGTTTGGATCACATCGTGTCATCTCAGATCGATGGAAAGGAATG
AGTCCAACACAAGTCAATGACGTTCTTCAAACACAACATCAACAAGTAGA
AGAAAACATGGTATGTACTGTACTTTACATTTCTCTCCTCCAGAATAATA
CACGCTTTTTTTATAAGAATATTTATGATGAAATGGGCAAAAGAATTAAG
AATATGGTAAGAATATTACCATGATGGAATTTGGGCTACAGAATCTGATT
GCCCTATTTAGAGCATTTTACCATTAAAAATTGCCAATTATCCTGCAGTA
ATGCTAAAGGGTTCCACAAAAATGCGAGTCCTTTGCCTGAGGTATGTATT
ACATGCTAGATTTTTGCCTGGGTTTGGATTTAAATCTAAGAATACTCTAA
GAATATTTCAGGATGATTTTTCCCAAAAAGTTAAGTATATTCATGATGAA
TTGGAAAAACGCCATTCTTATAAAAAAAGCGTGTATTCGTTCAAGAAGCA
AAAAAAAACGTTTATCATAACAAATCATGGGAAAAGAACTACGTTCTTGA
AGGTAATGACTATCACTAGCCGTATGCGCAGCGTCGCAAGCTGCGTGTCC
CAATTTAGCAAATCACTATACATCTAAAAAAACTCTAACGGAAGAAAGAT
AGCTGCCCATTGATGATTAGATTTTGACTTTATAAAGGAGAAAAAAGACA
ACATTGCATTGCAATTTTTAACCACAATTAAGTAAATGGCTTAGAAGAAT
TATATTTTAGATCTATTTAGCCATCGTTGCAAGACATTCGCGAGTGACTT
TGACAGACTTTAAAAAGTATAGAAAGTGATAGAGAGGGTCGCTATTGTAA
ACAGAAAGTTTTAAAGAGCATCTGAAAAATTAAGAATGAAAAATTATATT
TGAGAAGAAGGTTGATTTTTACCCATCCAGCTCCCAGGCACCTGTATAGA
AAATAGCATCTTGGCGTCTCAAAGTTATTCTAGTGATAGGAAATCTGCAT
AAGGTGCAAAAACATGATGGTTCAATGCCATAAAGAGGAGGCTTTGTAGA
GCTTTTTTAGATTTTCGAAAACTTTTTACAAAACGTTGTAAACATACACG
TTTTAGCGTATTAATATAAAGATTCTTTATTCTTCTTTTGAACAGAGAAA
ACGAGATGAAGCAAATAAGCAAGAAGAGGAATGGAACGAGAATATGCTTC
GAAACGCACGTGCCGCAGTCATGATGGAACGACAACAAGAACGAACACGT
AAAGAGTTACTTCGTCAACAAGCACTTGAAAATCAACGACTAGCCGGTGA
ACAAAAAGCCAAGTAAGTATTCTACTCTTTTGACTTTGTTTGTGAACACA
GCGTTGGTTTAAAGGATTTTTTATCACTATCACATGTCAGACTGTATTGA
ATGGCAAGCTAGGTGCAATCTTTAGCATTGTAGGGTACGAATAAAAAAGT
TTAATGCAGATTTTTAGTGTGGTGATATGCTGTAATGAGTTTGCTTTTAA
TTTATTGTATTTCAAGTTTCTGTTTTAAAAATTCAGGCAGCGTTACCAAA
CTTTCTTTTACGTTCATTTTTTCAGATTGGACGATATCAACAAGAATGTA
TACACTAACCAACCGACAGCTGCTTACTTCATGCAGTTCAATACCTCTAG
TCGATAGCCTGATCAAAATATACTTTTTTTAACCTTTCCTCTATGTAAAT
AATAGCTACGTAAATTTTAATCATAATGAAATTTTTTTATATTTCCAATA
ATAAATTACCAATTAGTTTCTTAAAAATACCCTTGTCGTTTATTTGTGGG
TCCATTAAATGGGTCTGATCCATTAAATCTGAACAATGGAATTACCATTT
GTTAATGACTACTCTCCCGATTATCAATAGCATTACATTATAATAAATCA
AAAAAGATTTCTATAGTATCACTTTATAGTACTTTAATGGGATATACTTT
CACGGGGATTAAATTTCGCCGATTTTGCGGATTTGGGTGTCATCCGCGAA
AATCCGCGAAATTAAGTCCCATTGGAAATTTGGAAGGGCCTCATCCGCGA
AATATTTCTAAACAATACTCAAAATATGTCAAATAAATACTATTTGAATG
GTTACTTGTATCAAAGAAGCGCAAATAATGTGTATTTCAACAACCAACAT
GCATGATTTGACAGTAGAAGTCACAAAACCGT

Coding sequence (CDS) from alignment at scaffold_167:107777..117958-

>TCONS_00050015 ID=TCONS_00050015|Name=TCONS_00050015|organism=Clytia hemisphaerica|type=CDS|length=7980bp|location=Sequence derived from alignment at scaffold_167:107777..117958- (Clytia hemisphaerica)
ATTGGACGATATCAACAAGAATGTATACACTAACCAACCGACAGCTGCTT
ACTTCATGCAGTTCAATACCTCTAGTCGATAGAGAAAACGAGATGAAGCA
AATAAGCAAGAAGAGGAATGGAACGAGAATATGCTTCGAAACGCACGTGC
CGCAGTCATGATGGAACGACAACAAGAACGAACACGTAAAGAGTTACTTC
GTCAACAAGCACTTGAAAATCAACGACTAGCCGGTGAACAAAAAGCCAAA
TCAACAAGTAGAAGAAAACATGGGAGTGGTTCACATCACAAATGAACGAA
CGAGCACAAGAAGACGCCAATCGTGGACAAGCTGATAGACTTCATGAACT
CAAAAGCATCGAGATGGATCAACGTGCAATGGACCTTGCTCGTGCTGAAG
ATGAGTGCCGTGATGCTGTCAATATGGCTACTAAGGAATACAATCTTGCT
TTAGCACGTGAGCGAAAATCTAAAGAAAATGCCGATCACCAAAAAGAGTT
AGAAGATAATCTAACGGAAATTTCAAATCACGTCAATGGAGATATGTTGA
CTGAAAATCCAGCAGTCGCTCAAAGTGCGTTTGGATCACATCGTGTCATC
TCAGATCGATGGAAAGGAATGAGTCCAACACAAGTCAATGACGTTCTTCA
AACACAACCAAATGATATGGCTATGAATGACCGGATTTGTGTCTTACTTC
AAAAACGACAAGACCAAGACGTCAAAGCTTTAGAAAAGTCAACCAACGAG
TTTCGTAAAGAGCACCAACGACCTGAAGATCGTCGTGAATTCGATATTTA
TGATCCTGATGGTAAAAAGAAGGATACTCCAGCTCGTGTGTCAGATGATG
ACCCACGATGTGGTATTTCTAGTTTACAAAAATTTCTTGGTGAAGATCTA
AATGAGAAAGCAAGAAAGAAATTACAACAAGAACAGAACAGGTTGATTTA
CAATCACTTGAGCAACAAGTTGGGGAACGAAAATGGATGGAAGATCAAGA
AAGAAGACGTCATGAAGCATTTGATGTACAAACTTGATTTGCCAATCGAT
TTACGTGAATCTGCTGCGATCGAGAGAAGAAGGATCAAAGAGCAGCAAAG
ACAAAGTAGAATTTTCAATGCTCGTGTGCGAACTATTGGTATTGGACGAT
ATCAACAAGAATGTATACACTAACCAACCGACAGCTGCTTACTTCATGCA
GTTCAATACCTCTAGTCGATAGAGAAAACGAGATGAAGCAAATAAGCAAG
AAGAGGAATGGAACGAGAATATGCTTCGAAACGCACGTGCCGCAGTCATG
ATGGAACGACAACAAGAACGAACACGTAAAGAGTTACTTCGTCAACAAGC
ACTTGAAAATCAACGACTAGCCGGTGAACAAAAAGCCAAATCAACAAGTA
GAAGAAAACATGGGAGTGGTTCACATCACAAATGAACGAACGAGCACAAG
AAGACGCCAATCGTGGACAAGCTGATAGACTTCATGAACTCAAAAGCATC
GAGATGGATCAACGTGCAATGGACCTTGCTCGTGCTGAAGATGAGTGCCG
TGATGCTGTCAATATGGCTACTAAGGAATACAATCTTGCTTTAGCACGTG
AGCGAAAATCTAAAGAAAATGCCGATCACCAAAAAGAGTTAGAAGATAAT
CTAACGGAAATTTCAAATCACGTCAATGGAGATATGTTGACTGAAAATCC
AGCAGTCGCTCAAAGTGCGTTTGGATCACATCGTGTCATCTCAGATCGAT
GGAAAGGAATGAGTCCAACACAAGTCAATGACGTTCTTCAAACACAACCA
AATGATATGGCTATGAATGACCGGATTTGTGTCTTACTTCAAAAACGACA
AGACCAAGACGTCAAAGCTTTAGAAAAGTCAACCAACGAGTTTCGTAAAG
AGCACCAACGACCTGAAGATCGTCGTGAATTCGATATTTATGATCCTGAT
GGTAAAAAGAAGGATACTCCAGCTCGTGTGTCAGATGATGACCCACGATG
TGGTATTTCTAGTTTACAAAAATTTCTTGGTGAAGATCTAAATGAGAAAG
CAAGAAAGAAATTACAACAAGAACAGAACAGGTTGATTTACAATCACTTG
AGCAACAAGTTGGGGAACGAAAATGGATGGAAGATCAAGAAAGAAGACGT
CATGAAGCATTTGATGTACAAACTTGATTTGCCAATCGATTTACGTGAAT
CTGCTGCGATCGAGAGAAGAAGGATCAAAGAGCAGCAAAGACAAAGTAGA
ATTTTCAATGCTCGTGTGCGAACTATTGGTATTGGACGATATCAACAAGA
ATGTATACACTAACCAACCGACAGCTGCTTACTTCATGCAGTTCAATACC
TCTAGTCGATAGAGAAAACGAGATGAAGCAAATAAGCAAGAAGAGGAATG
GAACGAGAATATGCTTCGAAACGCACGTGCCGCAGTCATGATGGAACGAC
AACAAGAACGAACACGTAAAGAGTTACTTCGTCAACAAGCACTTGAAAAT
CAACGACTAGCCGGTGAACAAAAAGCCAAATCAACAAGTAGAAGAAAACA
TGGGAGTGGTTCACATCACAAATGAACGAACGAGCACAAGAAGACGCCAA
TCGTGGACAAGCTGATAGACTTCATGAACTCAAAAGCATCGAGATGGATC
AACGTGCAATGGACCTTGCTCGTGCTGAAGATGAGTGCCGTGATGCTGTC
AATATGGCTACTAAGGAATACAATCTTGCTTTAGCACGTGAGCGAAAATC
TAAAGAAAATGCCGATCACCAAAAAGAGTTAGAAGATAATCTAACGGAAA
TTTCAAATCACGTCAATGGAGATATGTTGACTGAAAATCCAGCAGTCGCT
CAAAGTGCGTTTGGATCACATCGTGTCATCTCAGATCGATGGAAAGGAAT
GAGTCCAACACAAGTCAATGACGTTCTTCAAACACAACCAAATGATATGG
CTATGAATGACCGGATTTGTGTCTTACTTCAAAAACGACAAGACCAAGAC
GTCAAAGCTTTAGAAAAGTCAACCAACGAGTTTCGTAAAGAGCACCAACG
ACCTGAAGATCGTCGTGAATTCGATATTTATGATCCTGATGGTAAAAAGA
AGGATACTCCAGCTCGTGTGTCAGATGATGACCCACGATGTGGTATTTCT
AGTTTACAAAAATTTCTTGGTGAAGATCTAAATGAGAAAGCAAGAAAGAA
ATTACAACAAGAACAGAACAGGTTGATTTACAATCACTTGAGCAACAAGT
TGGGGAACGAAAATGGATGGAAGATCAAGAAAGAAGACGTCATGAAGCAT
TTGATGTACAAACTTGATTTGCCAATCGATTTACGTGAATCTGCTGCGAT
CGAGAGAAGAAGGATCAAAGAGCAGCAAAGACAAAGTAGAATTTTCAATG
CTCGTGTGCGAACTATTGGTATTGGACGATATCAACAAGAATGTATACAC
TAACCAACCGACAGCTGCTTACTTCATGCAGTTCAATACCTCTAGTCGAT
AGAGAAAACGAGATGAAGCAAATAAGCAAGAAGAGGAATGGAACGAGAAT
ATGCTTCGAAACGCACGTGCCGCAGTCATGATGGAACGACAACAAGAACG
AACACGTAAAGAGTTACTTCGTCAACAAGCACTTGAAAATCAACGACTAG
CCGGTGAACAAAAAGCCAAATCAACAAGTAGAAGAAAACATGGGAGTGGT
TCACATCACAAATGAACGAACGAGCACAAGAAGACGCCAATCGTGGACAA
GCTGATAGACTTCATGAACTCAAAAGCATCGAGATGGATCAACGTGCAAT
GGACCTTGCTCGTGCTGAAGATGAGTGCCGTGATGCTGTCAATATGGCTA
CTAAGGAATACAATCTTGCTTTAGCACGTGAGCGAAAATCTAAAGAAAAT
GCCGATCACCAAAAAGAGTTAGAAGATAATCTAACGGAAATTTCAAATCA
CGTCAATGGAGATATGTTGACTGAAAATCCAGCAGTCGCTCAAAGTGCGT
TTGGATCACATCGTGTCATCTCAGATCGATGGAAAGGAATGAGTCCAACA
CAAGTCAATGACGTTCTTCAAACACAACCAAATGATATGGCTATGAATGA
CCGGATTTGTGTCTTACTTCAAAAACGACAAGACCAAGACGTCAAAGCTT
TAGAAAAGTCAACCAACGAGTTTCGTAAAGAGCACCAACGACCTGAAGAT
CGTCGTGAATTCGATATTTATGATCCTGATGGTAAAAAGAAGGATACTCC
AGCTCGTGTGTCAGATGATGACCCACGATGTGGTATTTCTAGTTTACAAA
AATTTCTTGGTGAAGATCTAAATGAGAAAGCAAGAAAGAAATTACAACAA
GAACAGAACAGGTTGATTTACAATCACTTGAGCAACAAGTTGGGGAACGA
AAATGGATGGAAGATCAAGAAAGAAGACGTCATGAAGCATTTGATGTACA
AACTTGATTTGCCAATCGATTTACGTGAATCTGCTGCGATCGAGAGAAGA
AGGATCAAAGAGCAGCAAAGACAAAGTAGAATTTTCAATGCTCGTGTGCG
AACTATTGGTATTGGACGATATCAACAAGAATGTATACACTAACCAACCG
ACAGCTGCTTACTTCATGCAGTTCAATACCTCTAGTCGATAGAGAAAACG
AGATGAAGCAAATAAGCAAGAAGAGGAATGGAACGAGAATATGCTTCGAA
ACGCACGTGCCGCAGTCATGATGGAACGACAACAAGAACGAACACGTAAA
GAGTTACTTCGTCAACAAGCACTTGAAAATCAACGACTAGCCGGTGAACA
AAAAGCCAAATCAACAAGTAGAAGAAAACATGGGAGTGGTTCACATCACA
AATGAACGAACGAGCACAAGAAGACGCCAATCGTGGACAAGCTGATAGAC
TTCATGAACTCAAAAGCATCGAGATGGATCAACGTGCAATGGACCTTGCT
CGTGCTGAAGATGAGTGCCGTGATGCTGTCAATATGGCTACTAAGGAATA
CAATCTTGCTTTAGCACGTGAGCGAAAATCTAAAGAAAATGCCGATCACC
AAAAAGAGTTAGAAGATAATCTAACGGAAATTTCAAATCACGTCAATGGA
GATATGTTGACTGAAAATCCAGCAGTCGCTCAAAGTGCGTTTGGATCACA
TCGTGTCATCTCAGATCGATGGAAAGGAATGAGTCCAACACAAGTCAATG
ACGTTCTTCAAACACAACCAAATGATATGGCTATGAATGACCGGATTTGT
GTCTTACTTCAAAAACGACAAGACCAAGACGTCAAAGCTTTAGAAAAGTC
AACCAACGAGTTTCGTAAAGAGCACCAACGACCTGAAGATCGTCGTGAAT
TCGATATTTATGATCCTGATGGTAAAAAGAAGGATACTCCAGCTCGTGTG
TCAGATGATGACCCACGATGTGGTATTTCTAGTTTACAAAAATTTCTTGG
TGAAGATCTAAATGAGAAAGCAAGAAAGAAATTACAACAAGAACAGAACA
GGTTGATTTACAATCACTTGAGCAACAAGTTGGGGAACGAAAATGGATGG
AAGATCAAGAAAGAAGACGTCATGAAGCATTTGATGTACAAACTTGATTT
GCCAATCGATTTACGTGAATCTGCTGCGATCGAGAGAAGAAGGATCAAAG
AGCAGCAAAGACAAAGTAGAATTTTCAATGCTCGTGTGCGAACTATTGGT
ATTGGACGATATCAACAAGAATGTATACACTAACCAACCGACAGCTGCTT
ACTTCATGCAGTTCAATACCTCTAGTCGATAGAGAAAACGAGATGAAGCA
AATAAGCAAGAAGAGGAATGGAACGAGAATATGCTTCGAAACGCACGTGC
CGCAGTCATGATGGAACGACAACAAGAACGAACACGTAAAGAGTTACTTC
GTCAACAAGCACTTGAAAATCAACGACTAGCCGGTGAACAAAAAGCCAAA
TCAACAAGTAGAAGAAAACATGGGAGTGGTTCACATCACAAATGAACGAA
CGAGCACAAGAAGACGCCAATCGTGGACAAGCTGATAGACTTCATGAACT
CAAAAGCATCGAGATGGATCAACGTGCAATGGACCTTGCTCGTGCTGAAG
ATGAGTGCCGTGATGCTGTCAATATGGCTACTAAGGAATACAATCTTGCT
TTAGCACGTGAGCGAAAATCTAAAGAAAATGCCGATCACCAAAAAGAGTT
AGAAGATAATCTAACGGAAATTTCAAATCACGTCAATGGAGATATGTTGA
CTGAAAATCCAGCAGTCGCTCAAAGTGCGTTTGGATCACATCGTGTCATC
TCAGATCGATGGAAAGGAATGAGTCCAACACAAGTCAATGACGTTCTTCA
AACACAACCAAATGATATGGCTATGAATGACCGGATTTGTGTCTTACTTC
AAAAACGACAAGACCAAGACGTCAAAGCTTTAGAAAAGTCAACCAACGAG
TTTCGTAAAGAGCACCAACGACCTGAAGATCGTCGTGAATTCGATATTTA
TGATCCTGATGGTAAAAAGAAGGATACTCCAGCTCGTGTGTCAGATGATG
ACCCACGATGTGGTATTTCTAGTTTACAAAAATTTCTTGGTGAAGATCTA
AATGAGAAAGCAAGAAAGAAATTACAACAAGAACAGAACAGGTTGATTTA
CAATCACTTGAGCAACAAGTTGGGGAACGAAAATGGATGGAAGATCAAGA
AAGAAGACGTCATGAAGCATTTGATGTACAAACTTGATTTGCCAATCGAT
TTACGTGAATCTGCTGCGATCGAGAGAAGAAGGATCAAAGAGCAGCAAAG
ACAAAGTAGAATTTTCAATGCTCGTGTGCGAACTATTGGTATTGGACGAT
ATCAACAAGAATGTATACACTAACCAACCGACAGCTGCTTACTTCATGCA
GTTCAATACCTCTAGTCGATAGAGAAAACGAGATGAAGCAAATAAGCAAG
AAGAGGAATGGAACGAGAATATGCTTCGAAACGCACGTGCCGCAGTCATG
ATGGAACGACAACAAGAACGAACACGTAAAGAGTTACTTCGTCAACAAGC
ACTTGAAAATCAACGACTAGCCGGTGAACAAAAAGCCAAATCAACAAGTA
GAAGAAAACATGGGAGTGGTTCACATCACAAATGAACGAACGAGCACAAG
AAGACGCCAATCGTGGACAAGCTGATAGACTTCATGAACTCAAAAGCATC
GAGATGGATCAACGTGCAATGGACCTTGCTCGTGCTGAAGATGAGTGCCG
TGATGCTGTCAATATGGCTACTAAGGAATACAATCTTGCTTTAGCACGTG
AGCGAAAATCTAAAGAAAATGCCGATCACCAAAAAGAGTTAGAAGATAAT
CTAACGGAAATTTCAAATCACGTCAATGGAGATATGTTGACTGAAAATCC
AGCAGTCGCTCAAAGTGCGTTTGGATCACATCGTGTCATCTCAGATCGAT
GGAAAGGAATGAGTCCAACACAAGTCAATGACGTTCTTCAAACACAACCA
AATGATATGGCTATGAATGACCGGATTTGTGTCTTACTTCAAAAACGACA
AGACCAAGACGTCAAAGCTTTAGAAAAGTCAACCAACGAGTTTCGTAAAG
AGCACCAACGACCTGAAGATCGTCGTGAATTCGATATTTATGATCCTGAT
GGTAAAAAGAAGGATACTCCAGCTCGTGTGTCAGATGATGACCCACGATG
TGGTATTTCTAGTTTACAAAAATTTCTTGGTGAAGATCTAAATGAGAAAG
CAAGAAAGAAATTACAACAAGAACAGAACAGGTTGATTTACAATCACTTG
AGCAACAAGTTGGGGAACGAAAATGGATGGAAGATCAAGAAAGAAGACGT
CATGAAGCATTTGATGTACAAACTTGATTTGCCAATCGATTTACGTGAAT
CTGCTGCGATCGAGAGAAGAAGGATCAAAGAGCAGCAAAGACAAAGTAGA
ATTTTCAATGCTCGTGTGCGAACTATTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031683XLOC_031683Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050015-proteinTCONS_00050015-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050015-exon-scaffold_167-1575043694:117246..117958TCONS_00050015-exon-scaffold_167-1575043694:117246..117958Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1575043694:114839..114920TCONS_00050015-exon-scaffold_167-1575043694:114839..114920Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1575043694:111700..111982TCONS_00050015-exon-scaffold_167-1575043694:111700..111982Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1575043694:111033..111418TCONS_00050015-exon-scaffold_167-1575043694:111033..111418Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1575043694:109849..109871TCONS_00050015-exon-scaffold_167-1575043694:109849..109871Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1575043694:108647..108813TCONS_00050015-exon-scaffold_167-1575043694:108647..108813Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1575043694:107777..108383TCONS_00050015-exon-scaffold_167-1575043694:107777..108383Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:117246..117958TCONS_00050015-exon-scaffold_167-1510915933:117246..117958Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:114839..114920TCONS_00050015-exon-scaffold_167-1510915933:114839..114920Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:111700..111982TCONS_00050015-exon-scaffold_167-1510915933:111700..111982Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:111033..111418TCONS_00050015-exon-scaffold_167-1510915933:111033..111418Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:109849..109871TCONS_00050015-exon-scaffold_167-1510915933:109849..109871Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:108647..108813TCONS_00050015-exon-scaffold_167-1510915933:108647..108813Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1510915933:107777..108383TCONS_00050015-exon-scaffold_167-1510915933:107777..108383Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:117246..117958TCONS_00050015-exon-scaffold_167-1491911889:117246..117958Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:114839..114920TCONS_00050015-exon-scaffold_167-1491911889:114839..114920Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:111700..111982TCONS_00050015-exon-scaffold_167-1491911889:111700..111982Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:111033..111418TCONS_00050015-exon-scaffold_167-1491911889:111033..111418Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:109849..109871TCONS_00050015-exon-scaffold_167-1491911889:109849..109871Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:108647..108813TCONS_00050015-exon-scaffold_167-1491911889:108647..108813Clytia hemisphaericaexon
TCONS_00050015-exon-scaffold_167-1491911889:107777..108383TCONS_00050015-exon-scaffold_167-1491911889:107777..108383Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:107777..117958 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.2479	13.6139	7.65595	7.94081	66.6268	50.6107	35.153	34.6074	24.0411	34.0481	23.4345	25.4751	7.38318	8.57342	6.77345	6.32406	4.19534	6.75264	12.4155	10.7251	6.13666	5.98857	9.10235	8.47114	133.922	85.7612	25.1705	27.6808	6.78408	7.90775
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008805RIB43A
Blast
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BLAST of TCONS_00050015 vs. Swiss-Prot (Human)
Match: RIBC2 (RIB43A-like with coiled-coils protein 2 OS=Homo sapiens GN=RIBC2 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.474e-70
Identity = 133/310 (42.90%), Postives = 194/310 (62.58%), Query Frame = 3 
Query:  804 MAMNDRICVLLQKRQDQDVKALEKSTNEFRKEHQRPEDRREFDIYDPDGKKKDTPARVSDDDPRCGISSLQKFLGEDLNEKARKKLQQEQNREWFTSQMNERAQEDANRGQADRLHELKSIEMDQRAMDLARAEDECRDAVNMATKEYNLALARERKSKENADHQKELEDNLTEISNHVNGDMLTENPAVAQSAFGSHRVISDRWKGMSPTQVNDVLQTQHQQVEENMRKRDEANKQEEEWNENMLRNARAAVMMERQQERTRKELLRQQALENQRLAGEQKAKLDDINKNVYTNQPTAAYFMQFNTSSR 1733
            M  ND+I  +L+ R+ +D K L ++ N+F++  Q+PE RREFD+ DP   KKD PAR SD+D R  IS +QKF+GEDLN   RKK Q+EQNREW   Q  E     A +  A+ L+    ++ D+ A  L + E   R AV  + K++N + A E   ++  + ++E EDNL EI+N + GD+L+ENP  A S+FG HRV+ DRWKGM+  Q+  +   Q QQ++E +R ++E  +++ +W+   ++ ARA ++ ERQQ R +++L R     N  LA EQ  +   +N+ VYTNQPT  YF QFNT SR
Sbjct:    1 MRQNDKIMCILENRKKRDRKNLCRAINDFQQSFQKPETRREFDLSDPLALKKDLPARQSDNDVRNTISGMQKFMGEDLNFHERKKFQEEQNREWSLQQQREWKNARAEQKCAEALYTETRLQFDETAKHLQKLESTTRKAVCASVKDFNKSQAIESVERKKQEKKQEQEDNLAEITNLLRGDLLSENPQQAASSFGPHRVVPDRWKGMTQEQLEQIRLVQKQQIQEKLRLQEEKRQRDLDWDRRRIQGARATLLFERQQWRRQRDLRRALDSSNLSLAKEQHLQKKYMNE-VYTNQPTGDYFTQFNTGSR 309
The following BLAST results are available for this feature:
BLAST of TCONS_00050015 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RIBC22.474e-7042.90RIB43A-like with coiled-coils protein 2 OS=Homo sa... [more]
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