XLOC_031683 (gene) - C. hemisphaerica

Overview
NameXLOC_031683
Unique NameXLOC_031683
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:107777..117958-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031683 ID=XLOC_031683|Name=XLOC_031683|organism=Clytia hemisphaerica|type=gene|length=10182bp|location=Sequence derived from alignment at scaffold_167:107777..117958- (Clytia hemisphaerica)
CGAGAATAGGCCTCTGAAGCCTCCTGCAACCCAACCAAATAGAAAAAAAA AGTCTCTCTAAAAAAGTCTAAAAGTTATTTTTTCTAAAATATTGAGCTTG GATATCCAGGCTAGGCATACACTTGCTTATAAAAATAACATGTACTTTAC CTACACCCTAGATTTACATTGTTTATGCTGAATAAAAACTCACAGCTAGC TTACCTACGACTTCTTCCGACGTTTGAGATGAGGAATTAAAACTAAAAAA AAGATAAATTTTGATCTTTCACCGCAGTTCGAGTCTACCATTTTGGATTG AGGTTTTTTAACAATGATGTACCAAATTTTGAATATTATGGAGATAAGAG CATTTGCCTTCTCTCTATGATTCTCTAAAATTTATTATCTCCTTCATCAT TATGTTCCTTTTTTACGGTAGCGACTTTTATAAACAAAGTGAAAGTATCC AAGGAACGGTCGTAAACAAACACAAATTTTGAAATAAAGAGCCTCTCTTC ACCAAAAATTTATCAAATGATCAGGCAGTTTCAAGTCACCACACCATTCG TATTAATATCTTAGCTTGATCAAGCGATTACAGACAACATATAAAAATGT ACAAACTTGATTTGCCAATCGATTTACGTGAATCTGCTGCGATCGAGAGA AGAAGGATCAAAGAGCAGCAAAGACAAAGTAGAATTTTCAATGCTCGTGT GCGAACTATTGGTGTAAGTATCCTTCTTTTAGTTTGGTCATTATATTTGA TGATTGATGATTTCCTTTTCCCGTTAGTTGATATAATTGTATTTAAATTC GATTGTTGAATGCAATTGAATCTCAATACACCGTTTAGGAGTCTCGCCAT TTCACGGTACTCCATTGCAGAGGCCCGGTAAAAATGGTAGGTAAAAATGC GCACTTTAGTACTGTGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNACTGAAAAAGGGAAAAAAGGAAGAAAACTGGGAACTTTATTTTTTCA TTAAAAGTTTCTTCAATCTTTGAAGACAAAATTGACCCATGGAAAAAAAT TTTATCTATGCAGTTCTTTGAAATGAAGCAAAATATTTCCAACCTGGTTC AATTAAACTGGGTATTTGGCGCTATTACGTCACTTTCGTTTTCGACCCCG TTCATTTGCCAATGGTCGCAAGTGAAAAATACCCCGTTCATTTGCCAATG GTCGCAAGTGAAAAATACCCCGTTCATTTGCCAGGATGTGCCTGACTGAC CAACAGGGAAGTAAAGGTTGGGCAAGTTTATTATACCGCCAACTACTCTA AAACTTGGGACGATAGGTCGAAACATGGGACTGTTGCATATCTGGACTGT ATTTTTACTTACTGTAAAATCGAAAGAGAAATCGTGTATTTTTAAATACG CCGTTCCTTAACTCAAATCAGTCCCATGTTAATTGTCAGATAGTCCCAAG TTAGAGCAGTTGACGGTAGTTCACACCCTCCTCCTTTATAAGAGAAGGCG GCAGGGATGTTATATTTCTTGTAGAAAGGGGTCGACATTTTCAAAAAGAG GTTCATCTAGAAAAGGGGGTTAACGTGTTAGCAAAGTTCTTTGGACTTTC TAGCTTTCACACTGGATTAAAATCTTAAAAAGTTAAAATTTTCTTGCTCA CTTTGCTTGCAATCTATTTGAACCAATTTTTAGTTAATATGGATGGTGCA TAATGTCTTGAAAGTGGGGGGAAATCCTTATGACACCCCAGTTTTGAGTT CCTTCAAATTTTGAATAGGGGTAGAACCTAGAGTAAGAAGGGGGATTGCT CTAGACTAGGGGGGGTAGAAATCCCCTTGAAGGGAAATATGAAGTTCATT TTTCAAAGCTTTAACATGAATGAACCTGACTATAGGATAAAACACAAAGA GCTGAACAAGAAAATGGGGTCATATTTTAGGTCATATTATTTTGTTTCTG ATCGCCCCAATTAATTGCAGAGTAAGGGCTCGTTAAATTCATTCAATTGC TCCTCAGCTTTTTGGCTGAAGTTAAAATTTTTCTTCAGATTTCTGAAGGA TTTTGACACTACTGTAGAAATCCTTGAACAAGTTAGCAAAAATATTGGAT GATGGTGGTTTGTTATGTTTCCACTTTTAGACACTATAAAATTTCAAAGG CATCATTTACTCTTTATATGAAAATATTGAATTTCTAGGTTGATTTACAA TCACTTGAGCAACAAGTTGGGGAACGAAAATGGATGGAAGATCAAGAAAG AAGACGTCATGAAGCATTTGGTGAGTATCGAATATTATTTTAATATGAAG GCTGATTCGAGGTGAAGTCTTATTTTATCCACCTGTATAAAACGTCAAAA AAGTCAAACAGTTTTAGCATTTTTCTGAGCTTAATGAGATCCTCGTTTTT TTAACTATGAAAACGTCTTTTACATTTATATATATAATTTACAATGTATA TCAATGTGCCCTCCCGGTTATTACCATAATGGCTTTATGGCAACTCCTGA ACTTGGGCACAGGATGTACGGTTTATATATATATTCTTTTGTTGGTGAAC TTCTCAGGATTGCTCGTTCTACGTTACTTTTCGAGGACTTGAAAGTTAAA GCCAAAGTTTTTATACAAAGAATGCGATGTCAAGGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNTTCTAGATTTTTGTTGTATTTGTATTGTCTTTT TGTTTTGTGGGTTTTTGTCTTTATTGTTTCCATTTTGAGTAGTTGAAGGT TTTATACTTCTAGACTATATATGAAAATAAAATGTTTTCTCCTGTATATT TATATTTATATTTTATCAATTTCTACTCATACGCTCATACGTTTAGAACA AGGGGAAGGGTCGTATAAACGAGGAGGCTGGACAATTCCCAAATCTTTTA TAATTGGGAAAAACTGTTATTTTTAGCAAATGATATGGCTATGAATGACC GGATTTGTGTCTTACTTCAAAAACGACAAGACCAAGACGTCAAAGCTTTA GAAAAGTCAACCAACGAGTTTCGTAAAGAGCACCAACGACCTGAAGATCG TCGTGAATTCGATATTTATGATCCTGATGGTAAAAAGAAGGATACTCCAG CTCGTGTGTCAGATGATGACCCACGATGTGGTATTTCTAGTTTACAAAAA TTTCTTGGTGAAGATCTAAATGAGAAAGCAAGAAAGAAATTACAACAAGA ACAGAACAGGTAATATTTTTTATTGGTCACTATTTGTCATTTTTATTATT TTTCGTTAAGTTGAACAGAGTTGAAAGACTACCTTCTAATTACCTCTGTA TCAATTTTGGTACTTATTAAATTTGGCCGTCAAAAGTTTTCAAGGATATT TAGTTCTAATTTGTGGGCTTTTAATTTGCAGTATTTTACTAGGAACTGCT TATTCTAATTCCTGACTAGATTAATACACTTTAGATAGCTTTATATCTAA GCAAATAAAATAGTGACATTCTCAAACCATTCTTTATCAGGGAGTGGTTC ACATCACAAATGAACGAACGAGCACAAGAAGACGCCAATCGTGGACAAGC TGATAGACTTCATGAACTCAAAAGCATCGAGATGGATCAACGTGCAATGG ACCTTGCTCGTGCTGAAGATGAGTGCCGTGATGCTGTCAATATGGCTACT AAGGAATACAATCTTGCTTTAGCACGTGAGCGAAAATCTAAAGAAAATGC CGATCACCAAAAAGAGTTAGAAGATAATCTAACGGAAATTTCAAATCACG TCAATGGAGATATGTTGACTGAAAATCCAGCAGTCGCTCAAAGTGCGTTT GGATCACATCGTGTCATCTCAGATCGATGGAAAGGAATGAGTCCAACACA AGTCAATGACGTTCTTCAAACACAACATCAACAAGTAGAAGAAAACATGG TATGTACTGTACTTTACATTTCTCTCCTCCAGAATAATACACGCTTTTTT TATAAGAATATTTATGATGAAATGGGCAAAAGAATTAAGAATATGGTAAG AATATTACCATGATGGAATTTGGGCTACAGAATCTGATTGCCCTATTTAG AGCATTTTACCATTAAAAATTGCCAATTATCCTGCAGTAATGCTAAAGGG TTCCACAAAAATGCGAGTCCTTTGCCTGAGGTATGTATTACATGCTAGAT TTTTGCCTGGGTTTGGATTTAAATCTAAGAATACTCTAAGAATATTTCAG GATGATTTTTCCCAAAAAGTTAAGTATATTCATGATGAATTGGAAAAACG CCATTCTTATAAAAAAAGCGTGTATTCGTTCAAGAAGCAAAAAAAAACGT TTATCATAACAAATCATGGGAAAAGAACTACGTTCTTGAAGGTAATGACT ATCACTAGCCGTATGCGCAGCGTCGCAAGCTGCGTGTCCCAATTTAGCAA ATCACTATACATCTAAAAAAACTCTAACGGAAGAAAGATAGCTGCCCATT GATGATTAGATTTTGACTTTATAAAGGAGAAAAAAGACAACATTGCATTG CAATTTTTAACCACAATTAAGTAAATGGCTTAGAAGAATTATATTTTAGA TCTATTTAGCCATCGTTGCAAGACATTCGCGAGTGACTTTGACAGACTTT AAAAAGTATAGAAAGTGATAGAGAGGGTCGCTATTGTAAACAGAAAGTTT TAAAGAGCATCTGAAAAATTAAGAATGAAAAATTATATTTGAGAAGAAGG TTGATTTTTACCCATCCAGCTCCCAGGCACCTGTATAGAAAATAGCATCT TGGCGTCTCAAAGTTATTCTAGTGATAGGAAATCTGCATAAGGTGCAAAA ACATGATGGTTCAATGCCATAAAGAGGAGGCTTTGTAGAGCTTTTTTAGA TTTTCGAAAACTTTTTANCAAAAAGAGTTAGAAGATAATCTAACGGAAAT TTCAAATCACGTCAATGGAGATATGTTGACTGAAAATCCAGCAGTCGCTC AAAGTGCGTTTGGATCACATCGTGTCATCTCAGATCGATGGAAAGGAATG AGTCCAACACAAGTCAATGACGTTCTTCAAACACAACATCAACAAGTAGA AGAAAACATGGTATGTACTGTACTTTACATTTCTCTCCTCCAGAATAATA CACGCTTTTTTTATAAGAATATTTATGATGAAATGGGCAAAAGAATTAAG AATATGGTAAGAATATTACCATGATGGAATTTGGGCTACAGAATCTGATT GCCCTATTTAGAGCATTTTACCATTAAAAATTGCCAATTATCCTGCAGTA ATGCTAAAGGGTTCCACAAAAATGCGAGTCCTTTGCCTGAGGTATGTATT ACATGCTAGATTTTTGCCTGGGTTTGGATTTAAATCTAAGAATACTCTAA GAATATTTCAGGATGATTTTTCCCAAAAAGTTAAGTATATTCATGATGAA TTGGAAAAACGCCATTCTTATAAAAAAAGCGTGTATTCGTTCAAGAAGCA AAAAAAAACGTTTATCATAACAAATCATGGGAAAAGAACTACGTTCTTGA AGGTAATGACTATCACTAGCCGTATGCGCAGCGTCGCAAGCTGCGTGTCC CAATTTAGCAAATCACTATACATCTAAAAAAACTCTAACGGAAGAAAGAT AGCTGCCCATTGATGATTAGATTTTGACTTTATAAAGGAGAAAAAAGACA ACATTGCATTGCAATTTTTAACCACAATTAAGTAAATGGCTTAGAAGAAT TATATTTTAGATCTATTTAGCCATCGTTGCAAGACATTCGCGAGTGACTT TGACAGACTTTAAAAAGTATAGAAAGTGATAGAGAGGGTCGCTATTGTAA ACAGAAAGTTTTAAAGAGCATCTGAAAAATTAAGAATGAAAAATTATATT TGAGAAGAAGGTTGATTTTTACCCATCCAGCTCCCAGGCACCTGTATAGA AAATAGCATCTTGGCGTCTCAAAGTTATTCTAGTGATAGGAAATCTGCAT AAGGTGCAAAAACATGATGGTTCAATGCCATAAAGAGGAGGCTTTGTAGA GCTTTTTTAGATTTTCGAAAACTTTTTACAAAACGTTGTAAACATACACG TTTTAGCGTATTAATATAAAGATTCTTTATTCTTCTTTTGAACAGAGAAA ACGAGATGAAGCAAATAAGCAAGAAGAGGAATGGAACGAGAATATGCTTC GAAACGCACGTGCCGCAGTCATGATGGAACGACAACAAGAACGAACACGT AAAGAGTTACTTCGTCAACAAGCACTTGAAAATCAACGACTAGCCGGTGA ACAAAAAGCCAAGTAAGTATTCTACTCTTTTGACTTTGTTTGTGAACACA GCGTTGGTTTAAAGGATTTTTTATCACTATCACATGTCAGACTGTATTGA ATGGCAAGCTAGGTGCAATCTTTAGCATTGTAGGGTACGAATAAAAAAGT TTAATGCAGATTTTTAGTGTGGTGATATGCTGTAATGAGTTTGCTTTTAA TTTATTGTATTTCAAGTTTCTGTTTTAAAAATTCAGGCAGCGTTACCAAA CTTTCTTTTACGTTCATTTTTTCAGATTGGACGATATCAACAAGAATGTA TACACTAACCAACCGACAGCTGCTTACTTCATGCAGTTCAATACCTCTAG TCGATAGCCTGATCAAAATATACTTTTTTTAACCTTTCCTCTATGTAAAT AATAGCTACGTAAATTTTAATCATAATGAAATTTTTTTATATTTCCAATA ATAAATTACCAATTAGTTTCTTAAAAATACCCTTGTCGTTTATTTGTGGG TCCATTAAATGGGTCTGATCCATTAAATCTGAACAATGGAATTACCATTT GTTAATGACTACTCTCCCGATTATCAATAGCATTACATTATAATAAATCA AAAAAGATTTCTATAGTATCACTTTATAGTACTTTAATGGGATATACTTT CACGGGGATTAAATTTCGCCGATTTTGCGGATTTGGGTGTCATCCGCGAA AATCCGCGAAATTAAGTCCCATTGGAAATTTGGAAGGGCCTCATCCGCGA AATATTTCTAAACAATACTCAAAATATGTCAAATAAATACTATTTGAATG GTTACTTGTATCAAAGAAGCGCAAATAATGTGTATTTCAACAACCAACAT GCATGATTTGACAGTAGAAGTCACAAAACCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050015TCONS_00050015Clytia hemisphaericatranscript
TCONS_00050014TCONS_00050014Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050015-proteinTCONS_00050015-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:107777..117958 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RIBC2RIB43A-like with coiled-coils protein 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.5 27.23 15.31 15.88 133.25 101.22 70.31 69.21 48.08 68.1 46.87 50.95 14.77 17.15 13.55 12.65 8.39 13.51 24.83 21.45 12.27 11.98 18.2 16.94 267.84 171.52 50.34 55.36 13.57 15.82