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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00049929 ID=TCONS_00049929|Name=TCONS_00049929|organism=Clytia hemisphaerica|type=transcript|length=2138bp
atcaaatgtaaacaaacatcttTAGGTTGTAAAAATGGAGTGGAATGATA
TGGAAGTAATGATCAAGCCAAATCAAAGTTTGAGTATTCAATGGATGAGT
TAGACCGCCCTGGAGATATTCCACCTCCCAAGACATTGAAAACAAACGCC
CAACACACCATGGGAAACCGCCCTCCTGTTGCAATGGATCAAAGCGATGC
TATGGATGAAGTAGATCAAGTAGCGAAACCAACAATTTCACAAGCTGGGG
AAAGTGGAACAACTGAGCGCCCCTCGGTGATCATACCCGCCCCTGGTCAA
CAACAACCGCCCGACCTTGAACGTAAAGAGTCCGAAATATTATCCAGTAT
CGCAATGGACGAAACACCACCCGTTTTCCCGACTAANGATATTATCTAGT
ATCACAATGGACGAAACACCACCCGTTTTCCCGACTAAGAAGCCCGAAAA
ACCGGTTGAAGAAATGCTTTCAACTATTGACATTCCTTTCGACAATGATA
AATTTCAACTAGAGGAGATACGACCTGAATCACCTGGCGCTGATGCGACG
GACGCCCCAGCTTCGAGCCAAACTGATGGTCCTTTTAcgtcaacattttt
caaaccaGCGCAACCGATCCAGCAATTAGTTCAACATCGTTCAGAACGTA
AGAACAGAGAAGGGATTACCATCAAACATACCACTTATCACCCTAAACCT
TTGGAAAAGAATTCCAAAATGAGTGACCACGCATCGAACATTTATTCTGA
TAGTTTTTACAAAATGGACTGTTTTCCACGTGGGAAATTAACATTGATCA
ATGTTAAACATTTCACACGTGCTTCTGGTATGGGAGATTATCCACGTGAG
GGTACCAATAGGGATGCAGAGGGCTTGACCGACTTATTTCTAGATCTTGG
TTTTGTCGTTGATCGTTTTGATAACCCCTCTAAGAAGGAGATCCTAGCCA
TTGTCAAAGCTGCTGCAAATGAGGATTATTCAAAACAAGCGTGTTGCGCA
TGTGCAATTTTGAGTCACGGCGAAGAAGGCATTATTTACGGTAACGACga
ttttgtgaaaattcgtGACATCACCAAAATGTTTCGTACGCGTGGCCTAG
CTGGGAAGCCGAAATTTTTCTTATTCCAAGCGTGTCAAGGCTCAGAGTAC
ATGAATCCGTACGATGCAGTGGACGGGAAACCCGGTCAAAGATTATCAGA
GGAAGAAATGGCATTGACGCTACCGTCAGAAGCTGACTTTTTGTACGCTT
ACTCCACGGTGCCTGGCTACTACTCTTGGAGAAATTCTAGACGGGGATCC
TGGTTCATGGAAGCATTGGTTCAAGTTTTCCGTGAAAATGCTCATCGTAT
GGATGTCATGCGAATGTTGGTTAGAGTCAATGATATCATTTCATATCGCA
AATCGCGTACTGATGAAATAAAAACCGATAATAAACGACAGATTGCTTCA
TTGATcactcaaatgagaaaagatttCTTCTTGTTCCCACCATACGGACC
TTTGAAACATGCTCAATAAACTCATGTTTTTGTGTAGGTAGTAGCTTCAT
TGCGTTTTATTATAACTTTGATGTTGAATTATctcttatattttttaaaa
attttgtataTAAAACTGGCACTCATCTTGGGTTCTAAAGACCCTTTAAA
AAATACTCCTGCTCAAGATGTTGATATACAATAAATTTGTATCAGTGCAA
AGGTCAGTGACTCCGGTAGTACTCCGGTGACGGAACACAGTTTCCGTGTT
CAATGATCTTGAATAAAAGGAAAACTCGTGAAGGTTTCTGCCTGAAAGAA
AACTTGATTAAAGTTGATTTCTTCTTCAGTGGGAAAAACTAACAAAATTA
ACCAGTGGGATAGTCTTCCATTTTCAACCAAGCCTAGTTTTTTAAACTCA
GCTGATGATTGAGAAGAATAGGGGTATGgtttttgactgattttatgcgt
taagattttttaatatttgaattTATCATTATTTACCATCATCAAAATTG
AGTATAATCGTTTATATTtaggaaagaatttttttgatatttataaaatg
tgtattttgacgaaatttgtaaaaggaaaaatattgattgcttttatatt
tcattgattgaaaattgttttgaaaatttattttgtac Run BLAST on NCBI transcript from alignment at scaffold_167:1033474..1048520+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00049929 ID=TCONS_00049929|Name=TCONS_00049929|organism=Clytia hemisphaerica|type=transcript|length=15047bp|location=Sequence derived from alignment at scaffold_167:1033474..1048520+ (Clytia hemisphaerica)
atcaaatgtaaacaaacatcttTAGGTTGTAAAAATGGAGTGGAATGATA
TGGAAGTAATGATCAAGCCAAATCAAAGTTTGAGGTAGTACATTGCACAC
ATTTgctttactttttacttttgtcGAATTTTACTTAATGTTGATGTTTA
ATTGTTAAGGAAACAATAATTTTTGAGTGTAATCATGGATTCAAGCGATG
CAGAAGACAATGCAAGAGAAGTTGATATTTCCATGGCAGAATTGAGAAAT
TTTGATCCATCTGCACTGAGCTTATCGTACAACTTTAGGCCTGAAATTGT
TCAGAAGCTGACACTTTTTGGTAACGATTTGAACATTTTACCAGCCAGCA
TTGTACAGTTTATTCACCTAAGACATTTGGACATTTCTTCAAACCGAATT
TCCTGGATTAGCGGTGAAGTTGCAAGATTGCCATTATTGAAAATACTTGA
TGCTCGAAATAATCGCCTGAACAACTTGccaaaagaaattgaacaaTGCC
CCAAACTCTTAACTTTGAATTTAAGTGGAAACCAATTTAAAGTTATTCCT
ACACAAGTCTTCACACTGAGTCAATTGAAAGAGCTTTATCTTGGTGGGAA
CCAAATTGAAAGTCTACCTCCTCAAATTCAGAGTTTAGAAAGGTAAATAA
TATTTACTCATCAATAGTTGTTTTGGCGAATGTGATGGTATTTTGTGAAT
ACtgtaactaattactccacagcaTGAAGGGGGGCTtgtacggtgtgacg
ggattggcccttttttagtacggtgtTACaggatttgacaaaaaaaagac
gggaataTGGCGCGCGAAAGCGCTATAAAATACTATCATTTTTATAATAC
TATCTtcttcaaatataatactatcttttcaaatataatattatcttttc
aaatataatactatcttttcaattataatactatcttttcaaatataata
ctatcttttcaaatataatactatcttttttttgaaatttatcactttct
tttttttaacttaTTGCTATCTTTCCAGGCTCAGAAAAGTCGAGTTAAAA
AAGGAGAGTTACGAAAAAGTCAAGTTGagagcagtgccgtagcaactggg
gggcaaGAAGGGGGGGCAATGTCCCCCAATAGTTTTTTCAAAAgtggttt
tctggaaaaaccgaatttaataatatttttttctttctatatCACAACTA
TTAAGCTATTTTGATGCGTTTTTAGACCATCTAGAGgctccaattttcaa
aatcgccCTATGTCAATCAACTGTGATGTTACGCGCGttttattcttttg
tttaaaatgatataaaaaactGCAAACGTTTTGCAACGTCATCACATTTT
TTACATGGCAGTTAGACCTCCTTTTTAACCCGTCAATTTGTCTTTGCTTA
CATTTTCGAGTTGGGAAATTGTAAGATGACGTTAACATGGTACAGATGGT
ATAtttgtgacgtcacaaaatACATGCAGCTTATAACTCGAACTCGAGTT
TTTCAACTCAAACTTATTAACTCGACTTTTACGAGTAttatatatttgaa
aagatagtattttttattaGAAGAAGATAGTATTATTTAttagaaaagat
agtattatattagaaaagatagtattatattaGAAAAGATagtataattt
ttgaaaagatagtattatttttgaaaagatagtattatttttgaaaagat
agtattatttttgaaaagatagtattataaaaAGGATAGTATTTTATAGC
GCTTTCGCGCGCCATACGGGAAAAcgatattttaaaatcagacggtgacg
gtatttggcattattttttgtcattatgccggtatttgaacctgtacaaa
ccggtgtgacggtgttattatttttttcaatttttcgggattccgggact
CAGCAAAAACTTTGACAGGAAAGCGGTacttcgaacccctacaaaccccc
ctcATGAggtacctagagacaagatgatttatcatgtttttattggctga
gggaaagtaatgtatgtggagtaattagttattcaaaagactgtcgcGTT
CGCCAAAACATCTGTATTGTAGTTACGGTTAATAATCCACAAAAGCCTGC
TCAACAAAAATATCACTTCCAATGATCCACTGATTGGTTATAATTTGGAC
AGGAGGGGCTTTTGGGTTGTTTAACAGTACTGTGGTATCTCATGTTGAAT
GATTAAAAAACCTTTGTATTATAACAATAGGCCTTTGCTAGACACAATGC
TAATTTGACTACATAATatcgtaacttggtctaatgtcgacacccctcct
ctaattccgacacccctcctctaattctgacaccgtttttatcagctgaa
atttatagaaatgttgaaactgtttttctttgcttagtggtcagagagga
ataatcctttttcaatcagtgattcaagccttcatattattcctttctct
aaagaagggtgtcggaattagacgagggatgtcgatattagaccaattTA
TGGTACAGATAATAAATCAGCTATGAAAATTACTTACATCAACAAAGTAA
TTCTGgctttcaatagaccttttacTAGGTCACACTATGTATGTCAACTT
GGATATTTAAAGATTTTAGCATAAATCAAGAAAGTCGAATGGATGCAAGA
GAACCAACAGCATTAGCTAAAGTTTGGTCCCTTGAGACttcaaaaccagt
ttttgccaaACTGACAAAGCCTTTTTTGGCTTAGTGACCCTtagaaagtc
aattttctaaACTGATTGTACCATCTGATATATAGCTTGAAGAATGCAAC
TCCAAAATTGGCTCATTTACagtcttttttttataagcataaggAAAAAT
CAAGTAGATGCTCagtatgcttagcaaaatcttgttttcagccttaattt
atgcttatttatatgcttagactttgttttgttgattttctttgagttca
tggaaatttcgaatttttaagtcGAAATATTGATTCGGCTTAGAGAATta
cactttttggacctaccctaaggtagtcctttaaattaacccttgtccgt
ccgtccgttcgtctgttgccagcttttctcgggatcggctcattagtttt
ttctatttttttgcacaatgatacaaaatggcaatgcccaaaatgtgacg
gagctcgattttcgaaaaaatttatttccggccgaaaatgccggaaatat
gccggaaaaaccggttttttggcattttctcaagatttcatcattagttt
tttctgatttttTGCACAaagatgcgtattagcaatgcccaaaacttggc
tgagtccgatttttgagaaaaaaatttttccggtcgaaaatgccggaaat
atgccggaaatcaccattttgcagattttcatcagcctttttccttatat
ttcgttgttttttcacacaaaaacatttttgatagcaatgcccaccatga
agcatggttcaatcgtcaatagaactgagttttgaagccggaactttcta
aaaatcgccggtgcagcccattttcgccggaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TATGCGAGccgtactttatatttttttatgaaattttgcacactgatgca
aaatgataatacctaaaatgtgacggagcctgattttggaaaagaaattt
tccggccgaaaatgccggaaatatgccggaaaaacaggttttttggcatt
ttctcgagattttatcattagttatttctgattttttgctcaaagatgcg
tattaacaatgcccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNagatgcgtattaacaatgcccaaaacatggccgagtccg
atttttgagaaaaaattttttccggccgaaaataccggaaatatgccgga
aaaactgtttagttagcattttcttgagattttataattagctttttctg
attttttgctcaaagatgcctaataacaatgcccaaaacatggccgagtc
tgttctgcaaattttgcagatttgaattgggctttttccatacatttctt
tgtttttttcacttaaaaaaattattgataacaatgccaccatcaagcat
gattcaattgtcaataaaacttttgcaattttgcaaccaGAACTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagaactttctatttc
ttttttccctaaacccctcccccccatcaacaatcaatgatgacatttaa
tgcattttcgctaagcgctatattttcttaatggttgcttttctccttat
tgctatctaagtttcatcatcaggtaggtccattcagcatgttgcttgtt
ttgtaATTGGGTGCCGGCAGGTGAAAATGTTTGgtctaaaaatgataaaa
cagctttaaaagtaactctaaaaaggtcagcgttttagaaaagcaGCTGC
ACaagtttttttgcatttcagcttggaggtatgcttagctatgcttattt
tttaccaacttgagcctaagtatgcttataaacattAAGAAAACCTATAC
ACGATTTGTTATCTTAGCCCCTCATTAATGGACGATACATTTTCAAGAAT
GTAAATGTTTATGCAGAGGCGCCAgatttttttggtgaaaaaaaaTACTC
TGAACAGATCACAGCCACAGAAATATAAACTATTTtaaatgggataaact
tttgtgGAGATTAAATTTCATGATATTGTGCCTTATACTGCTAAatctag
cctgggtatccagattcaaaattttagaaaaaaaaactcttacctccaca
tacaaagtttctaaaattttagagtctggtgcaactaaaataaaccagct
gcgctggaaagtcagcccaaaAGGCTTAGAAGGCTTAGAAGTACAAATAA
GAGATCTAGCtttgttaaaatctgaaaaGCTTGAACGAGCGTATctattt
gcttgaaacgttcagACGAAAAAGTAGTGGTGCATAGTGGGATCCGCCGA
AAGCAGAAGTCGGTCAAACAAATTAATACCataattgaatttgaatttcg
ctCCTCAAAATGACAGTTGATGAATTAGCCAATGAAAGCTTGTTTTAGTT
TCTCTTTTCAAACTACCTCAGAAAAAAGGGCGATTTTTTATTGTCCAGTC
ACTTACTCATTTTTATTCAGTGAGTGAGTCCTGCGCTTGTTCAACTGtta
aaaatgtgagtccaaaattggactcacagctcgaacctgTCTAGTTTATA
TATCAGAgatatcagattataaaaaaccctCGACGGGTGTCTTGTCATAA
CAACAcagtaaaataaaataagacCCAAATAGAAGAATTTCTAAAAGTAG
TATACAACTTGACATTATTCAAAGAAAAGTAATTTCTTTAATACTCACTT
TCTCTATAATTAGTTCTCtttctttatttacaatgcaaaagTATCTTTTA
TTAACTATTGAATATGAagcaaaaaagaatctttttctttttttcttatt
attaattATACGCGTCTTTTTATGTTATGTGTTTTTCTCGTCCTATATCT
TactaagaaaaaatattttcgcgCGCTAAGTTATTCCGAAATCCTGtttc
ccgaaaataatccgaaatcggaattaaaacttaaagtcttaacgacgacc
agcgggaaaaaaattgtcaaaccGATTTGAAGAGTCACCTGGGCTGACTA
AAAATCTGGTACCATATGTGAATgtacccttgttgacagaatctcaaaac
tttggaaacccaggcatataattacttaccataaacGTCTTTCACAAAct
ctaaaaactttcaaaacttttttaaactgcatcaaaacatcagccacatt
tataaaggctcctttccagcggccattttgtttagaaatgagcctgcgtt
tttattttcatttgtttatttacaggggtcagctttttccaaaattctgc
tcagtgactgggcgcgtttTAAATAATTAGATGCAATTGCATATGCAGGG
ACAAGTATCCCTGCAGACAAGTTAGTTGGACTTGACCGTAAACCAGtgac
aaaatatttaaaaaactagacagtgaaatagtttacggtctggatatcca
ggctatgctAAATCATACATGTTGTTTGTCGCTTTTTTGATGCCAGAAaa
catttcttttctttttttcaataatgaacTTCTAAAATTGACTTTCTAAG
GGTCTCTAGACCAAATGTCCCTTCAATACTCAATAGAAAATTTTCTTCAG
CTTTTCCAGCTTAAACAAAACCTAAGGGACCCatataacaagaaaacaaa
ttaaaaaacctTTCATTTAGACTTCTCCTGGACTCACTGAATGAGAAATT
ACTGTAGCAAagcattttcaagttttaaaacgTGCCTATAGTTGTATTTA
ATTTGTTTGTGTCAGCCTGTTTTTCGCTTAGAGTTGCATACATTATCAAG
TAAGTTTACCTTTTTCAAGGTGGAATTAATTATTCCCAGTTATCCCAAAT
cctttaaataatatttttaccTATTTCTTATAGCTTGGAGATGCTGTACC
TTGGTGGAAATAAGATTTTCCAAGTGCCACCACATCTTGGAAAACTAACC
AATCTACGGCATTTGGTTTTATGTGATAACAAAATTTCAACCATTCCTCA
AGAACTTGGTCAATTGAAGAAACTTGAATCTCTAAGTCTCcataaaaatg
aattgaaacTATTACCAATGGCAATTGTAATGCTTTTGAATCTACAAGAA
CTAACATTGAGAGATAACCCTCTTGTTCACACCTTTATTAAACGCCTAGA
ATTCAACACACCATCTTTGTTGGAGCTGGCTGGGCGAGTAGTAAAAACGC
AAAACATTCCATACAACAAAAGAGTATTACCAAAACGATTGTGCTCATAC
TTAGACAGTGCTAAAAGGTGTGTCAATCCTAAATGTGATGGAGTTTATTT
TGATTCTCGTATTAAATGTGTTAAATTTGTTGACTTTTGTGGAAAGTTCC
GCTTACCTTTAGAACAATATTTATGCTCACCATGTGATACTCACGAAGAG
TGTTGCGGTGATAGCAAATCGGTAAGCGCTCAAATGTTGAGGAAAGCCTT
ACTACCAGACAATGTTTAAAATTGGATTGTTGTATTTCACTATGGagatg
aaatttattttatgagatgggtagttttttatatttttgtacaaTCATAT
TTAGCTGTAAATTTAGCcattataaaattttaaagatctATTTTACCCCG
CAGGTTCTGATATAAATTCATATTTATTTACATACATTCTTTTGACACAA
GAGCTTTTGTTGcaagatttttaaaatagttcaaacCTGCTagataaaat
agaaaaaaagttaagcGTTTCCTTTTGCCTAAATTTTGCTGCTgttcagg
gatttttctaagcacttttttatgtccGTATACGACCGATGAGTTCTTGA
CACTCAATCCTGCTCaatccaaaatagaaaaaatattttcaagcaaaatt
aaacttttttattgtttacaaGCAAAAATAACTAATACAATTtacatatt
caaatttttttgagagcttaGCACTCTGAACCCTCTAGGGCTTCGCCCTG
AACCCACTTCAAAGCGCCCTCATATTAAAAACTCAAtctaaatttacaaa
aacagCACCAGCTCagagtgcttagaaaaatccctgctGCTGcttatttg
tttttgattctaacaaaaaaacattatttttgtaaatagctGACATcaca
attatttttttatttctaggcGATCATCTAGCTAAACCTTGCTTGGGACA
AGCCTGCTAGAACTACTAAgctagaatttttaaattttcttgaattttta
aatttgcttgaattgtaaatatttagctttttatttaaaaagaaaaaatt
ctctttgaTAAACTTTTTACTGAATGTACCTGAAAGGCCTTTTAATCCAA
AGTAGAACCTGTTACATGTAGATAAAAAAGTAATTACTGTATTAATGAGC
ATTATAACATTTTTGACAAGAACTCCaccctttttataagaacaaagtat
ataagaacatcagaCTTCAAagccaaaaatagtcaaaaactTTAGGACAC
CAGAAGGCTTCTAAAAGACCCCCATCGatatccaaaattagttctctgTT
AGAGCAAATCTACCCATGACAGAGGAGGTTGTGAATTCTTATCATCCACC
AAGGCTTTACCATAGATGGTTCTTTTTTACAGTTTTCTGTATGCAGGGTT
TTTGGTGCAAGGTCTACTTTTGCTGCATTAAATATTGTGTTTATTTTTGG
GCATACTTTTTGCTTTCACGTATaccaatcaaaaaaagaaatacagTAAT
AGAAAATACAGTAGTAGAAAACTGAAGAGTTTGCTCATTTGGAATAACTG
TGTGTGTGAATAATTTCCTTTGGATAAATATGTGCTATACGAAGGAGAAc
gctataaaataaaatatctgTCATATAAAAAAGGAGAGTGTTGAATAGCA
AATGCTATCTAATGAATAGAATCTTTGGTGAATTAAACCTATTAAAAATT
AATTGCCATGTTATATATGTGAAGTGAACAGATTTGTCGATGTGGTGTCt
tgttaaaaaaagtaaaaggttgcaataataacattttttcaactgagaaa
ttataaaagaaaagactttttgtacaattatcaataaaaaagtATCAATA
TATAAACgataaaaaatacattttgatatcaaaaaatAGGTGAGTATATT
TTGAACGTTTTTcaattgacatttttttaacatttccaTAGATAACAAAA
CTAAATAATAGtgtaatttaatatttttactAAAAGTCTCCCTCTTTTAT
GAGTTAAAGCTTGAacccatttttatttgaattatttGTTTATATTCCCC
TGGGGAGAACCCTTTTTCTTTATGGTTTGAGGGGTCTCTCTGTAGTTAGT
ATAGTTTTGTGAAGTTAAAGAGTGTTAAAGTTCGTTCAAAACACACGAAA
ATATGGATAAATTGtaagtttttgtattttatgaCATACAAGGCCATATC
CTAAAAAGGGAGATCTATCTATCTAAAAGGATCTACACGTTTNTTTTTAA
AATCAAATGTATGAAtggttcaatttttaatttcagaaatatATATTTCG
TACTCTACTGAGAGCCCGTTACTCGTATTATTTAAAAACAGAGACAAAGG
ATTGCAGGCTAGAAATCAGACAGACagacaaaaattttccattgGCACAA
GGCCCTATCCTAAAAAGGGAGATCTAAAAGGATCTAAAAAGCTGAGAATG
ATTACTAAATTTATAATACGTAATAATAAGTCTTTTGAGCAAAATTCAAA
CTTgaagaagaaaatcttttttttactttctcgCCTTTCCTTATTccaat
tttaagaatatttttcagaatttcctTCATATTCAATCTAGATGTAAAGA
AGAAGTTGCTTCCTTCCTAgtcaaaaaaagcaaaacgtaaACAAATTTGC
AAAAAGGAAGTTCTTCAGTCTTCATAGCTCTTGATCATTCATAGCAACAG
TGTCTATACTatgttctttttctttcaagttTCAAATCGCTGTTCTTAGG
TCTGTATTTTATAGaggaaagattaaaaaaaaaattttttagcattttat
tTAGACTAATACATCTCCCTCTCACAGGGTGGGATTTCATctgccagtgg
gggtaaaaataactaaccaaaactcgatggggattgatattctatatttt
tttatggctaaggatttgaattccattgtttcctagccagaaaattcagt
ggggatggaaaaaagagcgcaatattttgcagtggggattTGCCTATATG
ACTATTTTCAACGGGGACAAAAataagagtataattttccaccagggacg
atactttgaccaatttttccagtttgaagggtcccagtgggtctgtgaga
agggggtgtactaAGTCATTCAAATTTCCAGTTTCATTTTGCATTACATC
TTCTTTAAAACCTCTAAAGCTTAGAACTTTAGAATAGCATAGAAGGACAA
ATTTTCAGACCAGGAAGTTGCTAAGAATAATTAGCTCACCTGAATCAACG
ATTCTGCGAAATAGGAATGCCTATTTCTTCGTAGAAAGTCTTATCTCTTC
TAATTTGAGCGTTTTTTGTTAATGAACACTGCGAAATTGATTTGTTCAAA
ATTTACGGATTGTAATTGTCATTGAATTTACTCTAAAGTTTAGCTTTTTA
TCGAATTTCGAGTTTTATGGCTTAAAAGTCGTCTTTGCATGCACgaattt
ttttacttattttcccTTGGATACTgtgtaattcatgatattcgtgacgt
aatgctttctacggaaagaccccggtttttgccagtagtggcaaatttta
tacaactttcgCCTagttaaatttgccactactggttaacaccggggtat
ttccgtagaaaacattacgtcatgaatattatgAATAAAGTTTCAAATCT
CATCGTGTGCCTTCTCTTTCTCAGAAGTCAGTGTTCGTTTTTGTTGTTCC
ATTGTTTACTCaagtttcaaattttatcataacatTTAAACATTATTTTC
ACACGGAATcttaaaaattctttgaatacCAATACTTTCTTTTGCTTTAT
TAAGGCTTTAAAATTAgatcaaatttttataattGTTTCTGAAAATGTTT
CCATACCATTATTAGGACTCGAGTCTTTGCCAATCGACATGATTTTGTCC
AAGTAACTCTCTACCCTATCAACATTTTCATGGTCTTTCTATTGACAATC
ATCATGTCTCAATTCTCTCCAAACATTTACTTATCAATACCAACTAAAGA
AAAGTGGGAATTTTTAAACGATCTTATCTCGCTTTTCATTGACTTATAAA
GCCCCCTCTAAAACCAATTTATCAGTTTATATTCGAAACAgtttttagtt
taactttcagTTATAAATAGCGAGTCATCTGTTGTGGCGTGGACTagtta
ttacaattttagtcCAGTTTGGAATTTATTTTACTACTGTTTTCTTAAAG
TTGTCTATTTGCCAGGTTAGTCGACCATTATATAGTTATTTAGTTATATA
CTAATCTCCTTCGAGCCTAATTACCGATGCACTTTCAAATTGTAACTTGA
TTAATTGTTCAATTGCTCAAAATATGTATCGATGAATAATTACAAGAAAT
GTTAGTTAAGATtatttatctatatattaaaCCTCTATTACCCAATTTAC
TAAGGAGATTTACCCCTGTCTCGATAAACCTTACTGATTTTCCATGACAT
ACCTTTTATCTAGAACACTTTCAATAATTCAGGCTTCATTTCTTCCAGAA
AATAACATTCTTATTTGTCTTCCCATTTTTCAGTATTCAATGGATGAGTT
AGACCGCCCTGGAGATATTCCACCTCCCAAGACATTGAAAACAAACGCCC
AACACACCATGGGAAACCGCCCTCCTGTTGCAATGGATCAAAGCGATGCT
ATGGATGAAGTAGATCAAGTAGCGAAACCAACAATTTCACAAGGTAACTC
ATtataaaacactttttttataagaacatcaaatttCTTTGTAACCTTCG
GACGCTCTTTACTTTTTTGGTTatgagcctaaaaatgtccCTAACATGTT
CCTCATTTTATGAGTAGTGTTGTCTATTTTTCTAggaaatcgggtgtttt
ggaGTCCTCAGCCAAagcattaaaatgtttttaacttgttcttatcgAGG
GCTgatgttcttgtatagtttgctCATATAAGAAACCGTTTATTTTATCC
CATAACAGCTCATTAGGAAACCAAggtacagtggaacctctaattagcgg
acagcatcggggaaaggggttagtgtccgctaattagaagtgtccgcctt
ttagaatcttttgatctcggagctccaattttgaaattaggccatcccag
ggtgtcgaaaatacaaaattggggtctaaagtacttatctgcagacacta
ggccatagaagaacaagaaaaatgttattaaaacgcaacaatttagtttt
taactaataaaagaaaatccaGAAATATAACACCAAGATTGAAAATAcaa
ttcgttgaatgggtctcagtttttttttcgatttaggacgtctaattgga
gagctaaaataggggttttggccatttcgtgcgaaaaaaattgtccgcta
atcagagggtccgctaattgagtgtccgccttttagaaacttttttatga
ggatttgactaggaaacgaccggggaaaatgaaattgtccgctaatcaga
gggtccgctaattgagtgtccgccttttagaaacttttttatgaggattt
gactaggaaacgaccggggaaaatgaaattgtccgctaatcagaggtgcc
cgcattttagagtgtccgttaattagaggttttactgtagtTTCATTCTC
TGCTCTGAAGGGATTCGATGAATGTGAAACTTCCTTCGCTCTATATATAA
TTCAGATAGCGCGCTGCATCTACCAGTTAAAATTGGTCTAGTTCTGATTG
CTTGAGCTGAAGGGTGAATTCACgttctttgatattttcatcCAAACCAT
GATATTTTGCGAGCTCTGTATTTGTGGAATGTTGTAACTTGCTGCTATAA
GCAAAGTAATTGTGCGAGAAATCAACCTTAATAAAACCTTGTATTTATTT
TAGCTGGGGAAAGTGGAACAACTGAGCGCCCCTCGGTGATCATACCCGCC
CCTGGTCAACAACAACCGCCCGACCTTGAACGTAAAGAGTCCGAAATATT
ATCCAGTATCGCAATGGACGAAACACCACCCGTTTTCCCGACTAANGATA
TTATCTAGTATCACAATGGACGAAACACCACCCGTTTTCCCGACTAAGAA
GCCCGAAAAACCGGTTGAAGAAATGCTTTCAACTATTGACATTCCTTTCG
ACAATGATAAATTTCAACTAGAGGAGATACGACCTGAATCACCTGGCGCT
GATGCGACGGACGCCCCAGCTTCGAGCCAAACTGATGGTCCTTTTAcgtc
aacatttttcaaaccaGCGCAACCGATCCAGCAATTAGTTCAACATCGTT
CAGAACGTAAGAACAGAGAAGGGATTACCATCAAACATACCACTTATCAC
CCTAAACCTTTGGAAAAGAATTCCAAAATGAGTGACCACGCATCGAACAT
TTATTCTGATAGTTTTTACAAAATGGACTGTTTTCCACGTGGGAAATTAA
CATTGATCAATGTTAAACATTTCACACGTGCTTCTGGTATGGGAGATTAT
CCACGTGAGGGTACCAATAGGGATGCAGAGGGCTTGACCGACTTATTTCT
AGATCTTGGTTTTGTCGTTGATCGTTTTGATAACCCCTCTAAGAAGGAGA
TCCTAGCCATTGTCAAAGCTGCTGCAAATGAGGATTATTCAAAACAAGCG
TGTTGCGCATGTGCAATTTTGAGTCACGGCGAAGAAGGCATTATTTACGG
TAACGACgattttgtgaaaattcgtGACATCACCAAAATGTTTCGTACGC
GTGGCCTAGCTGGGAAGCCGAAATTTTTCTTATTCCAAGCGTGTCAAGGC
TCAGAGTACATGAATCCGTACGATGCAGTGGACGGGAAACCCGGTCAAAG
ATTATCAGAGGAAGAAATGGCATTGACGCTACCGTCAGAAGCTGACTTTT
TGTACGCTTACTCCACGGTGCCTGGCTACTACTCTTGGAGAAATTCTAGA
CGGGGATCCTGGTTCATGGAAGCATTGGTTCAAGTTTTCCGTGAAAATGC
TCATCGTATGGATGTCATGCGAATGTTGGTTAGAGTCAATGATATCATTT
CATATCGCAAATCGCGTACTGATGAAATAAAAACCGATAATAAACGACAG
ATTGCTTCATTGATcactcaaatgagaaaagatttCTTCTTGTTCCCACC
ATACGGACCTTTGAAACATGCTCAATAAACTCATGTTTTTGTGTAGGTAG
TAGCTTCATTGCGTTTTATTATAACTTTGATGTTGAATTATctcttatat
tttttaaaaattttgtataTAAAACTGGCACTCATCTTGGGTTCTAAAGA
CCCTTTAAAAAATACTCCTGCTCAAGATGTTGATATACAATAAATTTGTA
TCAGTGCAAAGGTCAGTGACTCCGGTAGTACTCCGGTGACGGAACACAGT
TTCCGTGTTCAATGATCTTGAATAAAAGGAAAACTCGTGAAGGTTTCTGC
CTGAAAGAAAACTTGATTAAAGTTGATTTCTTCTTCAGTGGGAAAAACTA
ACAAAATTAACCAGTGGGATAGTCTTCCATTTTCAACCAAGCCTAGTTTT
TTAAACTCAGCTGATGATTGAGAAGAATAGGGGTATGgtttttgactgat
tttatgcgttaagattttttaatatttgaattTATCATTATTTACCATCA
TCAAAATTGAGTATAATCGTTTATATTtaggaaagaatttttttgatatt
tataaaatgtgtattttgacgaaatttgtaaaaggaaaaatattgattgc
ttttatatttcattgattgaaaattgttttgaaaatttattttgtac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00049929-exon-scaffold_167-1491911889:1033474..1033557 | TCONS_00049929-exon-scaffold_167-1491911889:1033474..1033557 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1510915933:1033474..1033557 | TCONS_00049929-exon-scaffold_167-1510915933:1033474..1033557 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1575043694:1033474..1033557 | TCONS_00049929-exon-scaffold_167-1575043694:1033474..1033557 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1491911889:1045307..1045466 | TCONS_00049929-exon-scaffold_167-1491911889:1045307..1045466 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1510915933:1045307..1045466 | TCONS_00049929-exon-scaffold_167-1510915933:1045307..1045466 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1575043694:1045307..1045466 | TCONS_00049929-exon-scaffold_167-1575043694:1045307..1045466 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1491911889:1046627..1048520 | TCONS_00049929-exon-scaffold_167-1491911889:1046627..1048520 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1510915933:1046627..1048520 | TCONS_00049929-exon-scaffold_167-1510915933:1046627..1048520 | Clytia hemisphaerica | exon |
| TCONS_00049929-exon-scaffold_167-1575043694:1046627..1048520 | TCONS_00049929-exon-scaffold_167-1575043694:1046627..1048520 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_167 | supercontig | scaffold_167:1033474..1048520 + |
Blast
BLAST of TCONS_00049929 vs. Swiss-Prot (Human)
Match: CASP7 (Caspase-7 OS=Homo sapiens GN=CASP7 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 5.782e-53 Identity = 97/246 (39.43%), Postives = 150/246 (60.98%), Query Frame = 2
Query: 758 YKMDCFPRGKLTLINVKHFTRASGMGDYPREGTNRDAEGLTDLFLDLGFVVDRFDNPSKKEILAIVKAAANEDYSKQACCACAILSHGEEGIIYGNDDFVKIRDITKMFR---TRGLAGKPKFFLFQACQGSEYMNPYDAVDGKPGQRLSEEEMALTLPSEADFLYAYSTVPGYYSWRNSRRGSWFMEALVQVFRENAHRMDVMRMLVRVNDIIS-YRKSRTDEIKTDNKRQIASLITQMRKDFFL 1483
Y M+ GK +IN K+F + +GMG R GT++DAE L F LGF V +++ S ++ ++K A+ ED++ AC AC +LSHGEE +IYG D I+D+T FR + L KPK F QAC+G+E + A G ++ +P EADFL+AYSTVPGYYSWR+ RGSWF++AL + E+ +++M++L RVND ++ + +S++D+ K+QI +++ + K+ +
Sbjct: 60 YNMNFEKLGKCIIINNKNFDKVTGMG--VRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQACRGTELDDGIQADSGPIND--TDANPRYKIPVEADFLFAYSTVPGYYSWRSPGRGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVVSMLTKELYF 301
The following BLAST results are available for this feature:
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