TCONS_00049893 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049893
Unique NameTCONS_00049893
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1914

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049893 ID=TCONS_00049893|Name=TCONS_00049893|organism=Clytia hemisphaerica|type=transcript|length=1914bp
CTGAAAAAAAGAGTTTATGCTgaaaaaaggataaaagaatCGACTAAcag
aataaattttatttatgGTAAACTTATGATTCTCACAGACAATCAATTGT
TGGTCGATTTATTCCTGGATGGATTCTTAAAGTATACTCAATTCTCTTTC
AATATCGTAGTTATCACAGTGGATGATTGTATATTCGATATGTTTGAGAA
TGATGATGAAAATACTACAATCAATATCAAATTCcgtgaaatcaaaattt
caatgcAAGGAATAGAAGCTATAAGGCAAATCGGATATCCAATATTCGAT
ATAGGTTCTTTTTATCCTGAGGACATGAAAGTATGGATCAAAGACATGTA
TCAGATTCCTGTTGAAGAACAGACTATTGGATATCGTGACGGACCAATTT
TTACCGATAACGAAGACTTGTCACGTGTCTGGCTCGATCGATCTTATCAA
CTAGAAAATGTGGAGCTTCAACTATACGTTCATTACACTGACAAAACTGA
GTTAAAGGAAATTTATGCTCAGAACGATATAAAAATGATGGACCCTTTAA
AAATTGTTAGTGGAAACAAGGAAAATATTTGGTATTATTATAGAGGGAAC
AATGGACCATCTCTTAATGATTTTCTTCATGAAACCTTTGGAATTCGAAA
AGATCTACAAAggtttcttttctttgtaaatCAAAATCGTGTCAAATATT
CAcaaattgacatttttagaTGTAAAAAAATCAGACTAGCAATTCAAGTA
GATGATGATGAAACAGACTTATTGAAACACCTTGAACCATTAGGTTTATC
TAGAGTCGGTTCAATTATTATTAAATGCCCTAATACCGGTTCAACGTTCT
GTAGTATACCTTTATCGCAATGGGAATTTTTTGTTAATCCTGAAGATGTG
TGCAATGAGATTATTAAAAAACATCGAGAATTTTTCTATACAAAAATTTG
GCTTGCACATGATGGTAACAAGTTAGACAAAGATACCATCATAGAAAGCT
TATTCataagagaaaatgaaattttcgaaaacGTCGACGTAACCTTGTTC
GTCCTACCCAATAAAAGGGTCAAAGAAGTTTGTGAAATGCATCATTTAGT
ATACTTGAAAGAAATTAACGTTAAATTTCTGACAGGTCAATTTACAATAG
ATTTGTTTCAGCAAGAAACTCTGTTAACTGTTGGAGATCTCAAAAGAACA
ATCTATGAAATAAAAGACATTGCACCACATTTGCAATCACTGTTTTGTTA
CAAATTTAATGATTTTCAGTTAGAAGGTTTCATGgaaatattttcacttt
caaCGGTTGTCAAAGAAAATGATTCGATTACTCTTAACTTGATTGTCAAA
CCAGCAAAAGAATTACAAGTAGTTATCAAATGTGCTGGACATCTTCTCAG
TGAAACTATCGATTTAAATATGAAGGAAACAGATACGATATCAGATATTA
AGAAGGAAATATCAAAAATTACCAATCATCCGTCTTCCATTATATCAATC
CTAAGTGTGGAAAACTGTTTATGGAAATTTGGTGAGAATATAGTTGGATT
TGATGACAATGACCAACTTTggaatctgaaattttcagaaaccATTTCAA
TTAAATTATATGCAATGTTGCAGGTATTGGTTTCGATTAAAGCTACTGAT
TTAACCATCCACCAACGTTCATTTCGAATTACCAACTTCAAATCCAATAG
AATCAGAAACATTGCTCAAGCcttagaaaaagagaaaaatctttttggat
CTACTCCAAAGCTTGTTACAAAACCAGGCATCACCCTGGAAACAAAGTTA
ATAGATATTGGTGAAGAATTAATTGAATTTGTTTCGCAACCTTCTTCCAC
CAAATGTTTATTGtcataaaataatatttgtgtATCTTAAAGAGAAGTCA
TTTTAACAGTAAAg
Run BLAST on NCBI

transcript from alignment at scaffold_167:412962..427771+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049893 ID=TCONS_00049893|Name=TCONS_00049893|organism=Clytia hemisphaerica|type=transcript|length=14810bp|location=Sequence derived from alignment at scaffold_167:412962..427771+ (Clytia hemisphaerica)
CTGAAAAAAAGAGTTTATGCTgaaaaaaggataaaagaatCGACTAAcag
aataaattttatttatgGTAAACTTATGATTCTCACAGACAATCAATTGT
TGGTCGATTTATTCCTGGATGGATTCTTAAAGTATACTCAATTCTCTTTC
AATATCGTAGTTATCACAGTGGATGATTGTATATTCGATATGTTTGAGAA
TGATGATGAAAATACTACAATCAATATCAAATTCcgtgaaatcaaaattt
caatgcAAGGAATAGAAGCTATAAGGCAAATCGGATATCCAATATTCGAT
ATAGGTTCTTTTTATCCTGAGGACATGAAAGTATGGATCAAAGACATGTA
TCAGATTCCTGTTGAAGAACAGACTATTGGATATCGTGACGGACCAATTT
TTACCGATAACGAAGACTTGTCACGTGTCTGGCTCGATCGATCTTATCAA
CTAGAAAATGTGGAGCTTCAACTATACGTTCATTACACTGACAAAACTGA
GTTAAAGGAAATTTATGCTCAGAACGATATAAAAATGATGGACCCTTTAA
AAATTGTTAGTGGAAACAAGGAAAATATTTGGTATTATTATAGAGGGAAC
AATGGACCATCTCTTAATGATTTTCTTCATGAAACCTTTGGAATTCGAAA
AGATCTACAAAggtttattttctttgtaaatCAAAATCCTGTCAAATATT
CAcaaattgacatttttagatttaaagaaaTCAGACTAGCAATTCAAGTA
GATGATGATGAAACAGACTTATTGAAACACCTTAAACCATTAGGTTTATC
TAGAGTCGGTTCAATTATTATTAAATGCCCTAATACCGGTTCAGTTTTCT
GTAGTTTACCCTTATCGCAATGGGAATCTTTTGTCGATCCTGAAGATGTG
TGCAATGAGATTATTAAAAAACATCGAGAACTTTTCTATACAAAAATTTG
GCTTGCACATGATGGTAACAAGTTAGGCAAAGATACTATCATAGAAAGCT
TATTTATcagagaaaatgaaattttggaaaacatCGAGTTAACCTTGTTC
GTCCTACCCAATAAAAGGGTCAAAGAAGTTTGTGAAATGCATCATTTAGT
ATACTTGAAAGAAATTAACGTTAAATTTCTGACAGGTCAATTTACAATAG
ATTTGTTTCAGCAAGAAAATCTGTTAACTGTTGGAGAACTCAAAAGAACA
ATCTATGAAATAAAAGACATTGCACCACATTTGCAATCACTGTTTTGTTA
CAAATTTAGTGATTTTCAGTTGGAAGGTtttatggaaatattttcacttt
taacAGATGTCAAAGAAAATGATTCGATTACTCTTAACTTGATTGTCAAA
CCAGCAAAAGAATTACAAGTAGTTATCAAATGTGCTGGACATCTTCACAG
TGAAACTATCGATTTAAATATGAAGGAAACAGATACAATTTCAGATATTA
AGAAGGAAGTATCAAAAATTACCAATCATCCGTCTTCCATTATATCAATC
CTAAGTGTGGAAAACTGTTTATGGAAATTTGGTGAGAATATAGTTGGATT
TGATGACAATGACCAACTTTGGCATCTGAAACTTTCAGAAACCATTTCAA
TTAAATTATATGCAATGTTGCAGGTATTGGTTTCGATTAAAGCTGATTTA
ACCATCCACCAACGTTCATTTCGAATTACCAACTTCAAATCCAATAGAAT
CAGAAACATTGCACAAGTcttagaaaaagagaaaaagctTTTCGGGTCTA
CTCCAAAGATTGTTACGAAACCAGGCATCACCCTGGAAACAAAGTTAATA
GATATTGGTGAAGAATTAATTGAATTTGTTTCGCAGCCTTCCTCCACCAA
ATGTTTATTgtcatgaaaataatatttgtgTATCTTAAAGAGAAGTCATT
TTAACAGTAAAggttttttgcatgaaattgtTGTCTGTTTTTGATAAGTT
TCTTCGTTGATCTGCGATAGCTTTCTcttaattttccttgaaaaaataCG
AAACTTTTTAGATTAAAAATCCAAAAGCTCTTTCAATAAATTTGCGAGTT
CCTAGATTTTTAAAACACTGGTAATGTTAATGTCTATTAAACCATTAGAA
TCTTAACCTTGTCACTTTACACTGCTTGGCTCCTATCAAAATCTTAATCA
ATATTAGTATAATATCATTTTGAATCAacatctgcaaaataatattttta
atgaTTCAGTGTGTCTCCAAAAGAGCgaacaaatttattttataaagTAA
CCTCCTCAAAACTCATTATCTTAACTTTTTAATTGCAGTAAACATTCAAG
AAGAAATGTTTACAATGAgtaataactttttttcacacAATAACATTATT
AATAACACTACCCATCATTAAGTATGTTTCAATCGTAAAGAAAaacctga
tttttgaagccagaaCTTTCctaaaatcgccggaacagacCATTATCGCC
GGCAAAAcagattttcttgaatttctcgagctctatacttgatatttttc
atgaaCTTTAGGACACTAATAataaatggcaatacctaaaatgtgacaga
gccttATTTTAAATAAACATACTGAAAATGCATGCAAGAAATATGCTGCT
TCTTATTTTACTTACTTTTTTATTTCCATTCTATATTATTTATCATTAGG
TAGCTCCAATATGCATTGTGCTTGTTTACTTTTATTCCTATCTTGAGATT
TAAGCAATTAATTTGCTCAAAATTCAGCTATTTCAAGCTGATGATTGTTT
TTATATTGTTCTTcttatttggcatttttgagcctcatagTTCTTATCGC
ATGCCATGTAAAATAtgtgcaatctgattggttacaTTACAGTGCATCAA
CGTCATATTTTCACTTATTGCACTGTTTGTTTTATTTGCACTGTCGCGCT
TCATTTATTGCACTGATCAATGCAACAGCttcatttttttgacgtcaatt
tatttgagaaataaaaaaaggaagtaGATTTTTCAAGTCTTGCGATAAAC
CAATTAAGACATAATACCTCGTGCAATAGGGGTTTATTTTCCCATCCCAT
ATTGCACTCTCTACTATGCGATAACTAatacttattaaaaaaaatacctt
attacatgaaaataaatactgaagtatttaacggccttgaaattaacaca
caaaaaattaacacgaatttgaTTTGCTTATTCAAgcacaccacggctgg
ttttaattaagggggtttttattaattttcaattcgtgttaaatacttcc
atatttattttcatgtaataaggCAGTGTTTGTTAGGTATCAGCTAACCT
ATTCCTAAAGGTTTAAACAATCGTGATGCTCGAAAATGATAAACAATAGA
TAAAtcaatttttctactttttttttctttcagagtaaaaataaaatatg
aaaaatcattTGACTGTGAATATTGGCAACAACCCTTCCTCTATATTTTA
CTGATGTGATGCAGATTCATATGacaatttgaagaaaagtattgaaaaaC
GTTTTAAGATTCCAGTTTCATGTCAAGACATTGAACATCAAGGAATTATT
TTAGATACAGAAACTTTTGAAGAACTGTATCAAAAACGATTGCAGTTTGA
TATTGAACTTGATGTTAATATTACTGATAGCTTGATCGATCCCGTCTTAG
TACATGACCGCAGAAACCTCGCTTTAAAAAAAGGATCAGGAATAAGGAAT
ATTAAAATGATTTATTTATCTAGTAACTCATCAGCCTTTCAAATCAATTA
TAAAGATTTGGATATCAGTACAACAGTgttagatttgaaaaaaataattt
ctgctAAAAAAAGAGTGTCAACAAAGagaatcaattttatttatgGTAAA
AAACATATGATTCTCACAGACAATCAGTTGTTAGTCGATTTATTCCTGGA
TGGGTCCTTAGAGTATACTCAATTTTCTTTCCATGTCATAGTGATCATAG
TGGATGATTGTATATTCGATATGTTTGAAAATGATAATGAAAATGCATAT
ATCAAATTcagtgaaatcaaaatttcaatgcAAGGAATAGAAGCTATAAG
GCAAATCGGATATCCAATATTCGATATAGGTTCTTTTTATCCCGAGGACA
TGAAACTTTGGATCAAAGACTTGTATCAGATTCCTATTGAAGAACAGACT
TTTGGATATTGTGACGGACCAATTTTCACCGATAGCGAAGACTTGTCACG
TGTCTGGCTCGATCGATCTTATCAACTAGAAAATGTGGAGCTTCAGCTAT
ACGTTCATTACACTGACAAAACTGAGTTAAAGGAAATTTATGGTCAGAAC
GATACAAAAATGATGGAACCTTCAAAAATTGTTAGtggaaacaagaaaaa
tatttggtATTATTATTATAGAGGGAACAATGGACCATCTCTTAATGATT
TTCTTCATGAAACCTTTAGAATTCGAAAAGATCTACGaaggtttcttttt
tttgtaaatcaAAATCCTGTCAAACATTCACAAATTGACCTTTTTAGATG
TAAAGAAATCAAACTAGCAATTCAAGTAGATGATGATGAAACAGACTTAT
TGAAACACCTTGAACCATTAGGTTGATCTAGAGTCGGTTCAATTATTATC
AAATGCCCTAATACCGGTTCAGTTTTCTGTAGTATACCCTTATCGCAATG
GAAATTTTTTGTCGATCTTGAAGATGTGTGCAATGAGattattaaaaaac
atcaaaaacttttCTATACAAAAATTTGGCTTGCACATGATGGTAACAAG
TTAGACAAAGATACCATCATAGAAAGCTTATTCATtagagaaaatgaaat
tttcgaaaacGTCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAATT
GTTCtcctttttttcagaaaataaaaataaaaatgaaaaatcatttgACT
GTGAATATTGGCAACAATCCTCCCTCCATATTTTACTGGTGTGATGCAGA
TTCATATGacaatttgaagaaaagtattgaaaaaCGTTATGAGATTCCAG
CTTCATGTCAAGGCATTGAACATCAAGGAATTATTTTGAACACAGAAACT
TTTGAAGAACTTTATCAAAAACGATTGCAGTTTGATATTAAACTTGATGT
TATTATTGATGATAGTACTGGTAACTTGATTGATTATACCTTAGTGCATA
CCCGTAGAAATCTTGCCTTGGAAAAAAGTTCAGGAATAAGGAATATAAAA
ATTATTGATTTATCTAGACACTTGTATCAATCCTGTCAAATTATTTATAA
AGATTTGGATATCAATACAACGGTACTAGATCTGAAAAAAAGAGTTTATG
CTgaaaaaaggataaaagaatCGACTAAcagaataaattttatttatgGT
AAACTTATGATTCTCACAGACAATCAATTGTTGGTCGATTTATTCCTGGA
TGGATTCTTAAAGTATACTCAATTCTCTTTCAATATCGTAGTTATCACAG
TGGATGATTGTATATTCGATATGTTTGAGAATGATGATGAAAATACTACA
ATCAATATCAAATTCcgtgaaatcaaaatttcaatgcAAGGAATAGAAGC
TATAAGGCAAATCGGATATCCAATATTCGATATAGGTTCTTTTTATCCTG
AGGACATGAAAGTATGGATCAAAGACATGTATCAGATTCCTATTGAAGAA
CAGACTTTTGGATATTGTGACGGACCAATTTTTACCGATAACGAAGACTT
GTCACGTGTCTGGCTCGATCGATCTTATCAACTAGAAAATGTGGAGCTTC
AGCTATACGTTCATTACACTGACAAAACTGAGTTAAAGGAAATTTATGGT
CAGAACGATACAAAAATGATGGAACCTTCAAAAATTGTTAGtggaaacaa
gaaaaatatttggtATTATTATTATAGAGGGAACAATGGACCATCTCTTA
ATGATTTTCTTCATGAAACCTTTAGAATTCGAAAAGATCTACGAAggttt
cttttctttgtaaatCCAAATCCTGTCAAACATTCACAAATTGACCTTTT
TAGATGTAAAGAAATCAATTTAGCAATTCAAGTAGATGATGATGAAACAG
ACTTATTGAAACACCTTGAACCATTAGGTTTATCTAGAGTCGGTTCGATT
ATTATCAAATGCCCTAATACCGGTTCAGTTTTCTGTAGTATACCCTTATC
GCAATGGAAATTTTTTGTCGATCTTGAAGATGTGTGCAATGAGattatta
aaaaacatcaaaaacttttCTATACAAAAATTTGGCTTGCACATGATGGT
AACAAGTTAGACAAAGATACCATCATAGAAAGCTTATTCataagagaaaa
tgaaattttcgaaaacGTCGACGTAACCTTGTTCGTCCTACCCAATAAAA
GGGTCAAAGAAGTTTGTGAAATGCATCATTTAGTATACTTGAAAGAAATT
AACGTTAAATTTCTGACAGGTCAATTTACAATAGATTTGTTTCAGCAAGA
AAATCTGTTAACTGTTGGAGATCTCAAAAGAACAATCTATGAAATAAAAG
ACATTGCACCACATTTGCAATCACTGTTTTGTTACAAATTTAGTGATTTT
GAGTTAGAAGGTtttatggaaatattttcacttttaacAGTTGTCAAAGA
AAATGATTCGATTACTCTAAACTTGATTGTCAAACCAGCAAAAGAATTAC
AAGTAGCTATCAAACTTGCTGGACATCTTCACAGTGAAACTATCAATTTA
NCAAATCCTGTCAAACATTCACAAATTGACCTTTTTAGATGTAAAGAAAT
CAATTTAGCAATTCAAGTAGATGATGATGAAACAGACTTATTGAAACACC
TTGAACCATTAGGTTTATCTAGAGTCGGTTCGATTATTATCAAATGCCCT
AATACCGGTTCAGTTTTCTGTAGTATACCCTTATCGCAATGGAAATTTTT
TGTCGATCTTGAAGATGTGTGCAATGAGATTAttaaaaaccatcaaaaac
ttttctttacaaaaatttGGCTTGCTCATGATGGTAACAAGTTAGACAAA
GATACCATCATAGAAAGCTTATTCATTAGAGAAAATGAAATTTTCGAAAA
CGTCGACTTAACCTTGTTCGTCCTACCCAATAAAAGGGTCAAAGAAGTTT
GTGAAATGCATCATTTAGTATACTTGAAAGAAATTAACGTTAAATTTCTG
ACAGGTCAATTTACAATAGATTTGTTTCAGCAAGAAAATCTGTTAACTGT
TGGAGATCTCAAAAGAACAATCTATGAAATAAAAGACATTGCACAACATT
TGCAATCACTGTTTTGTTACAAATTTAGTGATTTTGAGTTAGAAGGTTTT
ATGGAAATATTTTCACTTTCAACAGTTGTCAAAGAAAATGATTCGATTAC
TCTTAACTTGATTGTCAAACCAGCAAAAGAATTACAAGTAGCTATCAAAC
TTGCTGGACATCTTCACAGTGAAACTATCGATTTAAATATGAAGGAAACC
GATACGATATCAGATATTAAGAAGGAAGTATCAAAAATTACCAATCATCC
ATCTTCCATTATATCAATCCTAAGTGTGGAAAACTGTTTATGGAAATTTG
GTGAGAATATAGTTGGATTTGATGACAATGACCAACTTTGGAATCTGaag
ctttcagaaaacaattcaaTTGAATTTTTTGCATTCTTGCAGGTATTGGT
TTCAATTAAAGCTACTAATTCAGCCATCCACCAACGTTCATTTCGAATTA
CCAACTTCAAATCCAATAAAATCAGAAACATTACCCAAGTcttagaaaaa
gagaaaaagctTTTCGGATCTACTCCAAAGCTTGTTGAAAAACCAGGCAT
CACCCTGGAAACGAAGTTAATAGATATTGGTGAAGAATTAATTGAATTTG
TTTCGCAATCTTCTTCCACCAAATGTTTATTgtcatgaaaataatattta
tatTCCAAAAGCTCTTTCAATACATTTGCgagtttctaaatttttaaatc
aCTGGTAATGTTAATGCTATTAAACCATTTGAATCTTAACTTTTCTCTTT
CTACGGCTTTGGCTCCTATCAGAATCTTAATCAATATTAGTATAAATATC
ATTTTGAATCAACATCTGCAAATTATTAATTTTAATGATCCAGTGTGTCA
CCataaaaacgaacaaatttattttataaagTAACCTCCTCAAAACTCAT
TATCTTAACTTTTTAATTGCAGTAAACATTcaagaagaaatatttaaaat
gagtAATAACAATTTTTCACACAAGAACATTATTAATAACACTACCTATC
ATCAAGTATGTTTCAATTGTcaaaaaaacctgatttttgaagccagaaCT
TTCTTAAAATTGCCGGAACCATGGCTttgcagcaggttttaggtgacccc
taagatttaggtaacccctggttgccaaatattttaggtgacccctaatc
CAATGACATNCACATTTCTGAGAATAAAATTCCAAAAGCTCTTTCAATAC
ATTTGCGAGTTTCTAGATTTTTAAAACACTGGTAATGTTAATGCTATTAA
ACCATTTGTATCTTAACTTTTCTCTTTCTACGGCTTTGGCTCCTNgtcaa
attttttcgaaaatcctttttaaacaatcaaataaatacaacagttagtt
tagcttattgctgAATAAaataaatgccctaagaaatAAGTAAATGACAC
AGGATTAAAGAACttttacagatcagtgccgtaggaagcattttcatatt
agtGTTGGGCTGAAGTTTTGTGACAcagcgagggccaaccatggtttggc
NAAATGACACAGGATTAAAGAACttttacagatcagtgccgtaggaagca
ttttcatattagtGTTGGGCTGAAGTTTCGTGACAcagcgagggccaacc
atggtttggtNTAATTTTAATGATCCAGTGTGTCACCataaaaacgaaca
aatttattttataaagTAACCTCCTCAAAACTCATTATCTTAACTTTTTA
ATTCCAGTAAACATTCAAGAAGAAATGTTTACAATGAGTAATAACAATTT
TTCCACACAATAACATTATTAATAACACTACCTATCATCAAGTATGTTTC
AATTGTcaaaaaaacctgatttttgaagccagNgtcaaattttttcgaaa
atcctttttaaacaatcaaataaatacaacagttagtttagcttattgct
gAATAAaataaatgccctaagaaatAAGTAAATGACACAGGATTAAAGAA
CTTTTACAGATCAGTGCACTGAAGATAATACAttagataccaaattgtca
gtttttgagcattgcttagattaaaatataagaaGAGAAAGTGCCAACCC
TATGGTCTGGTAGGCTGCTTATAATTcaatcaccaaacatagaatctagc
ccccaggtccatctggaaaaatttaggtgacccctaacatggttagtccc
ccctagccacaggctaaaaccaggtaccaattgctgcttgaccttttagc
cccccccctcaggccaggggggggggggttccagccatgCGGAACAATCC
ATTATCGCCtgaaaaacaagttttcttgaatttctcgagctgtacttaat
atttttcataaagttttgaacaCTGATGCAAATTGGCAATATCTAAAATG
TGACTGAGCATGATTCTCAACAAACATACTTTTCCGGCCTAAattgccgg
aaatatgctggaaaaccagtttttggcattttttagagatttcataatca
gtttttatgatttttgcacaaagatgcgtattagcaatgtccaaaacatg
gttgatttggatttttgagaaaaatattttccggtcGAAATGCTTGAAAT
ATGGTGTTTCTTattttacttactttttttattaCCATTCTATATTAttt
atcatcaggtaggtccaatataCATTGTACTTGTTTACTTTTATTCCTAT
CTTGAGATTTAAGCAATTAATTTGCTCAAAATTCAACTAATTCAGGCTGA
TGATTGTTCTTATATTGTTCTTATTATTTGACATTCTTGGAGCCTTATAG
TTCTTATTGTGTTGTTCTTGTAAAAGAAGAAGAGTGTTTGTCAGGTATCA
GCTATCTTTTTCCTAAAGATGTAAGCAATCACGACGCttgaaaatgataa
acaataaaaaaatcaatttttgtccttttttttctttcagagtaaaaata
aaaatgaaaaatcatttgACTGTGAATATTGGCAATAACCCTCCCTCCAT
ATTTTATTGGTGTGATGCAGATTCATATGACAATTTGAAGAAAAGCATTG
AAAAACGTTATGAGATTCCAGCTTCATGTCAAGGCATTGAACATCAAGGA
ATTATTTTGGATACAGAAACTTTTGAAGAACTTTATCAAAAACGATTGCA
GTTTGATATTAAACTTGATGTTATTATTGATGATAGTACTGGTAACTTGA
TTGATTCTACCTTAGTACATACCCGAAGAAATCTtgccttgaaaaaaaat
tcaggaataaggaatataaaaattattgatttgtctagACACTTGTATCA
ATCCTGTCAAATTATTTATAAAGATTTGGATATCAATACAACGGTACTAG
ATCTGAAGAAAAGAGTTTATGCTgaaaaaaggataaaagaatCGACTGAc
agaatcaattttattgatgGGTTTATGATTCTCACAGACAATCAATTGTT
GGTCGATTTATTCCTGGATGGATTCTTAAAGTATACTCAATTCTCTTTCA
ATATCGTAGTTATTACAGTGGATGATTGTATATTCGATATGTTTGAGAAT
GATGATGAAAATACTACAATCGATATCAAATTCcgtgaaatcaaaatttc
aatgcACGGAATAGAAGCTAAAAGGCAAATTGGATATCCAATATTATATA
TAGGTTCTTTTTATCTTGAGGACATAAAAGTATGGATCAGAGACTTGTAT
CAGATTCCTATTGAAGAACAGACTATTGGATATTGTGACGGACCAATTTT
TACCAATAACTTGTCACGTGTCTGGCTCGATCGATCTTATCAACTAAAAA
ATATGGAGCTTCATCTATACGTTCATTACACTGACAAAACTGATTTAAAG
GAAATTTATACTCAGAACGATATAAGAATGATGGAACCTATAAAAATTGT
TAGTGGAAACGAGGAAaatatttggtatttttattatAGAGGGAACAATG
GACCATCTCTTAATGATTTCCTTCATGAAACCTTTGGAATTCGAAAAGAT
ATACGTAggtttcttttctttgtaaatCAAAATCGTGTCAAATATTCAca
aattgacatttttagaTGTAAAAAAATCAGACTAGCAATTCAAGTAGATG
ATGATGAAACAGACTTATTGAAACACCTTGAACCATTAGGTTTATCTAGA
GTCGGTTCAATTATTATTAAATGCCCTAATACCGGTTCAACGTTCTGTAG
TATACCTTTATCGCAATGGGAATTTTTTGTTAATCCTGAAGATGTGTGCA
ATGAGATTATTAAAAAACATCGAGAATTTTTCTATACAAAAATTTGGCTT
GCACATGATGGTAACAAGTTAGACAAAGATACCATCATAGAAAGCTTATT
CataagagaaaatgaaattttcgaaaacGTCGACGTAACCTTGTTCGTCC
TACCCAATAAAAGGGTCAAAGAAGTTTGTGAAATGCATCATTTAGTATAC
TTGAAAGAAATTAACGTTAAATTTCTGACAGGTCAATTTACAATAGATTT
GTTTCAGCAAGAAACTCTGTTAACTGTTGGAGATCTCAAAAGAACAATCT
ATGAAATAAAAGACATTGCACCACATTTGCAATCACTGTTTTGTTACAAA
TTTAATGATTTTCAGTTAGAAGGTTTCATGgaaatattttcactttcaaC
GGTTGTCAAAGAAAATGATTCGATTACTCTTAACTTGATTGTCAAACCAG
CAAAAGAATTACAAGTAGTTATCAAATGTGCTGGACATCTTCTCAGTGAA
ACTATCGATTTAAATATGAAGGAAACAGATACGATATCAGATATTAAGAA
GGAAATATCAAAAATTACCAATCATCCGTCTTCCATTATATCAATCCTAA
GTGTGGAAAACTGTTTATGGAAATTTGGTGAGAATATAGTTGGATTTGAT
GACAATGACCAACTTTggaatctgaaattttcagaaaccATTTCAATTAA
ATTATATGCAATGTTGCAGGTATTGGTTTCGATTAAAGCTACTGATTTAA
CCATCCACCAACGTTCATTTCGAATTACCAACTTCAAATCCAATAGAATC
AGAAACATTGCTCAAGCcttagaaaaagagaaaaatctttttggatCTAC
TCCAAAGCTTGTTACAAAACCAGGCATCACCCTGGAAACAAAGTTAATAG
ATATTGGTGAAGAATTAATTGAATTTGTTTCGCAACCTTCTTCCACCAAA
TGTTTATTGtcataaaataatatttgtgtATCTTAAAGAGAAGTCATTTT
AACAGTAAAg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031630XLOC_031630Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049893-exon-scaffold_167-1491911889:412962..413623TCONS_00049893-exon-scaffold_167-1491911889:412962..413623Clytia hemisphaericaexon
TCONS_00049893-exon-scaffold_167-1510915933:412962..413623TCONS_00049893-exon-scaffold_167-1510915933:412962..413623Clytia hemisphaericaexon
TCONS_00049893-exon-scaffold_167-1575043694:412962..413623TCONS_00049893-exon-scaffold_167-1575043694:412962..413623Clytia hemisphaericaexon
TCONS_00049893-exon-scaffold_167-1491911889:426520..427771TCONS_00049893-exon-scaffold_167-1491911889:426520..427771Clytia hemisphaericaexon
TCONS_00049893-exon-scaffold_167-1510915933:426520..427771TCONS_00049893-exon-scaffold_167-1510915933:426520..427771Clytia hemisphaericaexon
TCONS_00049893-exon-scaffold_167-1575043694:426520..427771TCONS_00049893-exon-scaffold_167-1575043694:426520..427771Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:412962..427771 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.658075	1.16191	0.267799	0.578019	0.326946	0.15698	0	0	0.322179	0	0	0.196324	0.19105	0.148298	0.0528526	8.21996e-06	0.195674	0.530227	0.141844	0.0921034	0.609448	0	0.206631	0.350591	0	0	0.429014	0.145546	0.265734	0.537933
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049893 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top