TCONS_00049867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049867
Unique NameTCONS_00049867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3245

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049867 ID=TCONS_00049867|Name=TCONS_00049867|organism=Clytia hemisphaerica|type=transcript|length=3245bp
tgaaaagaagaataaagaaattttgaaaaaagagaagatgaaaaaataga
GTAGAAAGGGTTCATGGAAGGAGAGAGATAAATACTACAGGAATAACAAC
AAACTCACAACACAAAATTATATATATTGAGAGGGAAGGAGAGAAATCAC
TTCTAAACTTGTATTACCTATCAACATTTATTACATACATTTTGCATATG
CTACCTTTCGAAGAATTTTGTTTTTGCACTACTTTAGTTGAAAATGAACT
TTGCCACGGTTGATAATCGAGTTGACCACGCTAATCCATTCACAAATCAA
ATCTTCCAAGAAGCTGTTATACGGAATGATAAAGCTATCGTAAAACTTCT
TCTCAAATACGGTATCTATCCAAAGAGAAACGAACGTAATCGTCAAGGTT
TGACTGCACTTCAGCAATGTGTTCTCGATGGAAACGGTCGAATGGCAATA
TTATTACTAGAAGCTGGAGCGGACATCGAGGCAAAAACATCAAACGGTTG
GACTTGTTTACACATCGCTTCTGCATTAGGTGATCTTGACATGTTAGCCA
CCTTAGTAAACCATTGTTGTGATTTAGTAGCCTTGACTAAGAATGAGGAA
CTACCTATTGATCTTGCAGCATCTCGTGATATCAAAATCAAACTTGCTAA
GGAAATGTCACGTATCGGTTACAGTGAGTTAGCGCAATGGTATATGCGTA
AACTAGCAGCCCGTGAAGGCGTTTTCTACGTACTTTCAGCTGATACTCTG
TTGGATTTAGCCTGTGAAGACAAACAAGAAGGAAGCCTGGGGAGTGAATT
TGCACGTCAATACAATCAACAACGTGAAATGTACATCCACTCTCCAATTC
GTAAACAAGACTCACAAGCTTTCCGTATTGATGCTTCACCGAAAAAGGAT
TTATGGCTTGAAAACCCTGCCCAAGAACAAACGAAATATCTCACATACTC
GAGTGGTTATTTATCAGAAGTCGTTTTCGACCCAGCGTCAGGACAATATT
TAAAAGCACTTTCGTCAAACCCTCCATTGTTAGATTCACCGCAACGTAAA
ACTGTGATTGAAGAGAAAATTCAACTAGCTTCAATCAGTGAGGTAGACGG
TCCACCAATCAGCATGGAGGAATCTAAATCACGTAGTGGTACTTTAAAAC
GAACATCTAGCAACAAACGACACAGTCAGAATCTACGTAAACAAAGCACA
ATTGAGCTACATATTGATTATTCACATACAacagaaagtgaaagtgatga
CGACTGCGCTTTTGTAGCCGACCAATATGACGGATACCTTACTCAACCGT
CAGATGTAACCAACTCCTTACCTAATCGCCGGAAACCCAATAATGCCGAT
TCTCATTCACCCGGACACTTAAAAACATATGAGAGAAGTTCATTTAAATC
TTCAGATCGACCTAGCTTGGAAAGTGTTGAGGAACATACTGGTTTGAGTA
ATGAGACACTTATTATTAAAGATACTCCTATTCGATCAGCCCTTGCTTCA
TCCAACGAAAGCAATAATCAGCCAGAGCTAACGGAACCGTACAGTACCAC
ACCACCAACAGCTAATTCCACTCTTAGCAGTTCAGGGAGCGGTGGCAAAT
CCAAGAACGTTAAGTTTAACCCGGTCGATAAGAACAATGAATTTTGTAAT
TGTCCGACTTGCAAGAAACTTGGATATGCGTTTTCACCGGATATTCAAGT
AGGAAGCCGGAAACCACCGACGCTGCAACAAGCACCACAGCAAAGAGAAC
AAGCGTCACATTTAACGGGTAAAACGCCACAGGAAATAATGCAGACAGGC
GCTGGGTATAATCAATTTTATTACCCTGAAACCACCACTGAAAAAGGAGG
ACTTTATTATGATCAAAGTGGTTATGAGTATAAGCCTCGCAAACGAAAGA
AGAAGCTGTTTTCAGGCATCAAGTCCATGTTTAAAGATAGTATCAAAGTG
CGGACCAATATGGACCCATCCCCTGCATGTGATGATGCTGGTATTCTTTT
CTCAGTGTCAGTTCGTGATCGTAACAAAGCCAAACAAATCCGACAACGAC
AAGAAGTGCGTCGTAGCAACTCCTTCTCCGGTATGGAATCATCGTACAAA
GCTGCTCGAGATGAAGAGGTCAGTGTATTATCACATTCTCAAGTTGTTGC
ACCACCTGCTAAATTCTCCGATATCTATCAAGAAAGAGGGGTGTTTGACC
CTACTCAGTATGAAACCAAGATGGAGTCGTCGAGTCGCGTACAACAGGGA
GAGTACCCTCATCAATCTTCAAGCCAGCAGCAATATCAACAGTCACAACA
ACAAAACCAACAAAGGGGACGTGATCAAGCACCGTCTAATTATTACCAGC
CACGAAACACGTACGAATCGAGTCGCCGTGAGAAACATCAATTCACACGT
GACCTTCCACCTCCATCAATGAACGGTGCAATAGCAGATGATATGTTGTA
TTACACCGAGGAAGAAATCAATGCTTATTTAGATGCCACGACAACTCTCC
CACATGGTTTCCACTACAGTCGCGCACCACAAACCAACAACTATCAACAA
CATCCTCAGAACATCTTACAACAACACCCTAAACAAGCTGTTCCCATCCA
ACAACAAATTCCTCCATTAGCCAACAACAGTACCGGTCAACAAAAATACC
ACAGATCTAACAACCAAAACCATCATCAACAATCTCACTCAACAAAATCT
CAGCACCCTCCAACATCTAATAACCATTCAACAAACTACCAGCAGCAATC
AACGAAATCCTCAACAGTAGTAGACCACCATCATCAACATTCTTCATCCT
CGCATCGGGAACGAGCACATGATTCACATCATTCTCACCACCATAAAGAT
GAACACAACAATGACAAGAGATTGATGGCTGGTAAGGAATCATCTTCTTC
GTCGAAAACAGCAATGGATAATTGTGAATATTGTAAAAGTAATGCACCTA
TTGCTGGTGCTATTCCTATTCAAACTGCAGAATGAGATTCTCTTGGACTA
TGTAACTTTCGATGGAAATTCTCAGTGAATGATCAACATTATTTTAATGA
GATTGAAACCAGCCGGATCTGCTGGGCATGGTGTATTATACATAGGCAAA
CTTAAACTattaatgtaaattaattgCAAAATTGTAAGGATGCAAATGAT
GTTTTAATGAAATTCTCTAATTTAAATCTGTCCTGGAATAATGAAGTTGT
TTATTAGTAAAATGCTATAATATAGTAAAATGCTATTATTTAAGC
Run BLAST on NCBI

protein sequence of TCONS_00049867-protein

>TCONS_00049867-protein ID=TCONS_00049867-protein|Name=TCONS_00049867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=913bp
MNFATVDNRVDHANPFTNQIFQEAVIRNDKAIVKLLLKYGIYPKRNERNR
QGLTALQQCVLDGNGRMAILLLEAGADIEAKTSNGWTCLHIASALGDLDM
LATLVNHCCDLVALTKNEELPIDLAASRDIKIKLAKEMSRIGYSELAQWY
MRKLAAREGVFYVLSADTLLDLACEDKQEGSLGSEFARQYNQQREMYIHS
PIRKQDSQAFRIDASPKKDLWLENPAQEQTKYLTYSSGYLSEVVFDPASG
QYLKALSSNPPLLDSPQRKTVIEEKIQLASISEVDGPPISMEESKSRSGT
LKRTSSNKRHSQNLRKQSTIELHIDYSHTTESESDDDCAFVADQYDGYLT
QPSDVTNSLPNRRKPNNADSHSPGHLKTYERSSFKSSDRPSLESVEEHTG
LSNETLIIKDTPIRSALASSNESNNQPELTEPYSTTPPTANSTLSSSGSG
GKSKNVKFNPVDKNNEFCNCPTCKKLGYAFSPDIQVGSRKPPTLQQAPQQ
REQASHLTGKTPQEIMQTGAGYNQFYYPETTTEKGGLYYDQSGYEYKPRK
RKKKLFSGIKSMFKDSIKVRTNMDPSPACDDAGILFSVSVRDRNKAKQIR
QRQEVRRSNSFSGMESSYKAARDEEVSVLSHSQVVAPPAKFSDIYQERGV
FDPTQYETKMESSSRVQQGEYPHQSSSQQQYQQSQQQNQQRGRDQAPSNY
YQPRNTYESSRREKHQFTRDLPPPSMNGAIADDMLYYTEEEINAYLDATT
TLPHGFHYSRAPQTNNYQQHPQNILQQHPKQAVPIQQQIPPLANNSTGQQ
KYHRSNNQNHHQQSHSTKSQHPPTSNNHSTNYQQQSTKSSTVVDHHHQHS
SSSHRERAHDSHHSHHHKDEHNNDKRLMAGKESSSSSKTAMDNCEYCKSN
APIAGAIPIQTAE
Run BLAST on NCBI

transcript from alignment at scaffold_167:95789..99313+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049867 ID=TCONS_00049867|Name=TCONS_00049867|organism=Clytia hemisphaerica|type=transcript|length=3525bp|location=Sequence derived from alignment at scaffold_167:95789..99313+ (Clytia hemisphaerica)
tgaaaagaagaataaagaaattttgaaaaaagagaagatgaaaaaataga GTAGAAAGGGTTCATGGAAGGAGAGAGATAAATACTACAGGAATAACAAC AAACTCACAACACAAAATTATATATATTGAGAGGGAAGGAGAGAAATCAC TTCTAAACTTGTATTACCTATCAACATTTATTACATACATTTTGCATATG CTACCTTTCGAAGAATTTTGTTTTTGCACTACTTTAGTTGAAAATGGTAC AGTATTTTATATTTCTAGttatgtttttaatattttcataattaCAATCG TTTTACTTTTTACAATTCGCAATTGCAGTCTTGGATAGATTATCTACTAT TGtaattgtttttctaaaaaaaattgcctaaaaCCCTAAATTACAGCAAG GAGTTTTCACATTCGGTTTTCTCACATAACGGTAAAACGCACTTTAAGGA CTTAAAAACAAGCTACATTTATCTAGAAGTCTGAAAAGAAAACTGTAACT TTATATATATTTCTTCTTGTTAACAGAACTTTGCCACGGTTGATAATCGA GTTGACCACGCTAATCCATTCACAAATCAAATCTTCCAAGAAGCTGTTAT ACGGAATGATAAAGCTATCGTAAAACTTCTTCTCAAATACGGTATCTATC CAAAGAGAAACGAACGTAATCGTCAAGGTTTGACTGCACTTCAGCAATGT GTTCTCGATGGAAACGGTCGAATGGCAATATTATTACTAGAAGCTGGAGC GGACATCGAGGCAAAAACATCAAACGGTTGGACTTGTTTACACATCGCTT CTGCATTAGGTGATCTTGACATGTTAGCCACCTTAGTAAACCATTGTTGT GATTTAGTAGCCTTGACTAAGAATGAGGAACTACCTATTGATCTTGCAGC ATCTCGTGATATCAAAATCAAACTTGCTAAGGAAATGTCACGTATCGGTT ACAGTGAGTTAGCGCAATGGTATATGCGTAAACTAGCAGCCCGTGAAGGC GTTTTCTACGTACTTTCAGCTGATACTCTGTTGGATTTAGCCTGTGAAGA CAAACAAGAAGGAAGCCTGGGGAGTGAATTTGCACGTCAATACAATCAAC AACGTGAAATGTACATCCACTCTCCAATTCGTAAACAAGACTCACAAGCT TTCCGTATTGATGCTTCACCGAAAAAGGATTTATGGCTTGAAAACCCTGC CCAAGAACAAACGAAATATCTCACATACTCGAGTGGTTATTTATCAGAAG TCGTTTTCGACCCAGCGTCAGGACAATATTTAAAAGCACTTTCGTCAAAC CCTCCATTGTTAGATTCACCGCAACGTAAAACTGTGATTGAAGAGAAAAT TCAACTAGCTTCAATCAGTGAGGTAGACGGTCCACCAATCAGCATGGAGG AATCTAAATCACGTAGTGGTACTTTAAAACGAACATCTAGCAACAAACGA CACAGTCAGAATCTACGTAAACAAAGCACAATTGAGCTACATATTGATTA TTCACATACAacagaaagtgaaagtgatgaCGACTGCGCTTTTGTAGCCG ACCAATATGACGGATACCTTACTCAACCGTCAGATGTAACCAACTCCTTA CCTAATCGCCGGAAACCCAATAATGCCGATTCTCATTCACCCGGACACTT AAAAACATATGAGAGAAGTTCATTTAAATCTTCAGATCGACCTAGCTTGG AAAGTGTTGAGGAACATACTGGTTTGAGTAATGAGACACTTATTATTAAA GATACTCCTATTCGATCAGCCCTTGCTTCATCCAACGAAAGCAATAATCA GCCAGAGCTAACGGAACCGTACAGTACCACACCACCAACAGCTAATTCCA CTCTTAGCAGTTCAGGGAGCGGTGGCAAATCCAAGAACGTTAAGTTTAAC CCGGTCGATAAGAACAATGAATTTTGTAATTGTCCGACTTGCAAGAAACT TGGATATGCGTTTTCACCGGATATTCAAGTAGGAAGCCGGAAACCACCGA CGCTGCAACAAGCACCACAGCAAAGAGAACAAGCGTCACATTTAACGGGT AAAACGCCACAGGAAATAATGCAGACAGGCGCTGGGTATAATCAATTTTA TTACCCTGAAACCACCACTGAAAAAGGAGGACTTTATTATGATCAAAGTG GTTATGAGTATAAGCCTCGCAAACGAAAGAAGAAGCTGTTTTCAGGCATC AAGTCCATGTTTAAAGATAGTATCAAAGTGCGGACCAATATGGACCCATC CCCTGCATGTGATGATGCTGGTATTCTTTTCTCAGTGTCAGTTCGTGATC GTAACAAAGCCAAACAAATCCGACAACGACAAGAAGTGCGTCGTAGCAAC TCCTTCTCCGGTATGGAATCATCGTACAAAGCTGCTCGAGATGAAGAGGT CAGTGTATTATCACATTCTCAAGTTGTTGCACCACCTGCTAAATTCTCCG ATATCTATCAAGAAAGAGGGGTGTTTGACCCTACTCAGTATGAAACCAAG ATGGAGTCGTCGAGTCGCGTACAACAGGGAGAGTACCCTCATCAATCTTC AAGCCAGCAGCAATATCAACAGTCACAACAACAAAACCAACAAAGGGGAC GTGATCAAGCACCGTCTAATTATTACCAGCCACGAAACACGTACGAATCG AGTCGCCGTGAGAAACATCAATTCACACGTGACCTTCCACCTCCATCAAT GAACGGTGCAATAGCAGATGATATGTTGTATTACACCGAGGAAGAAATCA ATGCTTATTTAGATGCCACGACAACTCTCCCACATGGTTTCCACTACAGT CGCGCACCACAAACCAACAACTATCAACAACATCCTCAGAACATCTTACA ACAACACCCTAAACAAGCTGTTCCCATCCAACAACAAATTCCTCCATTAG CCAACAACAGTACCGGTCAACAAAAATACCACAGATCTAACAACCAAAAC CATCATCAACAATCTCACTCAACAAAATCTCAGCACCCTCCAACATCTAA TAACCATTCAACAAACTACCAGCAGCAATCAACGAAATCCTCAACAGTAG TAGACCACCATCATCAACATTCTTCATCCTCGCATCGGGAACGAGCACAT GATTCACATCATTCTCACCACCATAAAGATGAACACAACAATGACAAGAG ATTGATGGCTGGTAAGGAATCATCTTCTTCGTCGAAAACAGCAATGGATA ATTGTGAATATTGTAAAAGTAATGCACCTATTGCTGGTGCTATTCCTATT CAAACTGCAGAATGAGATTCTCTTGGACTATGTAACTTTCGATGGAAATT CTCAGTGAATGATCAACATTATTTTAATGAGATTGAAACCAGCCGGATCT GCTGGGCATGGTGTATTATACATAGGCAAACTTAAACTattaatgtaaat taattgCAAAATTGTAAGGATGCAAATGATGTTTTAATGAAATTCTCTAA TTTAAATCTGTCCTGGAATAATGAAGTTGTTTATTAGTAAAATGCTATAA TATAGTAAAATGCTATTATTTAAGC

Coding sequence (CDS) from alignment at scaffold_167:95789..99313+

>TCONS_00049867 ID=TCONS_00049867|Name=TCONS_00049867|organism=Clytia hemisphaerica|type=CDS|length=5484bp|location=Sequence derived from alignment at scaffold_167:95789..99313+ (Clytia hemisphaerica)
ATGAACTTTGCCACGGTTGATAATCGAGTTGACCACGCTAATCCATTCAC
AAATCAAATCTTCCAAGAAGCTGTTATACGGAATGATAAAGCTATCGTAA
AACTTCTTCTCAAATACGGTATCTATCCAAAGAGAAACGAACGTAATCGT
CAAGGTTTGACTGCACTTCAGCAATGTGTTCTCGATGGAAACGGTCGAAT
GGCAATATTATTACTAGAAGCTGGAGCGGACATCGAGGCAAAAACATCAA
ACGGTTGGACTTGTTTACACATCGCTTCTGCATTAGGTGATCTTGACATG
TTAGCCACCTTAGTAAACCATTGTTGTGATTTAGTAGCCTTGACTAAGAA
TGAGGAACTACCTATTGATCTTGCAGCATCTCGTGATATCAAAATCAAAC
TTGCTAAGGAAATGTCACGTATCGGTTACAGTGAGTTAGCGCAATGGTAT
ATGCGTAAACTAGCAGCCCGTGAAGGCGTTTTCTACGTACTTTCAGCTGA
TACTCTGTTGGATTTAGCCTGTGAAGACAAACAAGAAGGAAGCCTGGGGA
GTGAATTTGCACGTCAATACAATCAACAACGTGAAATGTACATCCACTCT
CCAATTCGTAAACAAGACTCACAAGCTTTCCGTATTGATGCTTCACCGAA
AAAGGATTTATGGCTTGAAAACCCTGCCCAAGAACAAACGAAATATCTCA
CATACTCGAGTGGTTATTTATCAGAAGTCGTTTTCGACCCAGCGTCAGGA
CAATATTTAAAAGCACTTTCGTCAAACCCTCCATTGTTAGATTCACCGCA
ACGTAAAACTGTGATTGAAGAGAAAATTCAACTAGCTTCAATCAGTGAGG
TAGACGGTCCACCAATCAGCATGGAGGAATCTAAATCACGTAGTGGTACT
TTAAAACGAACATCTAGCAACAAACGACACAGTCAGAATCTACGTAAACA
AAGCACAATTGAGCTACATATTGATTATTCACATACAacagaaagtgaaa
gtgatgaCGACTGCGCTTTTGTAGCCGACCAATATGACGGATACCTTACT
CAACCGTCAGATGTAACCAACTCCTTACCTAATCGCCGGAAACCCAATAA
TGCCGATTCTCATTCACCCGGACACTTAAAAACATATGAGAGAAGTTCAT
TTAAATCTTCAGATCGACCTAGCTTGGAAAGTGTTGAGGAACATACTGGT
TTGAGTAATGAGACACTTATTATTAAAGATACTCCTATTCGATCAGCCCT
TGCTTCATCCAACGAAAGCAATAATCAGCCAGAGCTAACGGAACCGTACA
GTACCACACCACCAACAGCTAATTCCACTCTTAGCAGTTCAGGGAGCGGT
GGCAAATCCAAGAACGTTAAGTTTAACCCGGTCGATAAGAACAATGAATT
TTGTAATTGTCCGACTTGCAAGAAACTTGGATATGCGTTTTCACCGGATA
TTCAAGTAGGAAGCCGGAAACCACCGACGCTGCAACAAGCACCACAGCAA
AGAGAACAAGCGTCACATTTAACGGGTAAAACGCCACAGGAAATAATGCA
GACAGGCGCTGGGTATAATCAATTTTATTACCCTGAAACCACCACTGAAA
AAGGAGGACTTTATTATGATCAAAGTGGTTATGAGTATAAGCCTCGCAAA
CGAAAGAAGAAGCTGTTTTCAGGCATCAAGTCCATGTTTAAAGATAGTAT
CAAAGTGCGGACCAATATGGACCCATCCCCTGCATGTGATGATGCTGGTA
TTCTTTTCTCAGTGTCAGTTCGTGATCGTAACAAAGCCAAACAAATCCGA
CAACGACAAGAAGTGCGTCGTAGCAACTCCTTCTCCGGTATGGAATCATC
GTACAAAGCTGCTCGAGATGAAGAGGTCAGTGTATTATCACATTCTCAAG
TTGTTGCACCACCTGCTAAATTCTCCGATATCTATCAAGAAAGAGGGGTG
TTTGACCCTACTCAGTATGAAACCAAGATGGAGTCGTCGAGTCGCGTACA
ACAGGGAGAGTACCCTCATCAATCTTCAAGCCAGCAGCAATATCAACAGT
CACAACAACAAAACCAACAAAGGGGACGTGATCAAGCACCGTCTAATTAT
TACCAGCCACGAAACACGTACGAATCGAGTCGCCGTGAGAAACATCAATT
CACACGTGACCTTCCACCTCCATCAATGAACGGTGCAATAGCAGATGATA
TGTTGTATTACACCGAGGAAGAAATCAATGCTTATTTAGATGCCACGACA
ACTCTCCCACATGGTTTCCACTACAGTCGCGCACCACAAACCAACAACTA
TCAACAACATCCTCAGAACATCTTACAACAACACCCTAAACAAGCTGTTC
CCATCCAACAACAAATTCCTCCATTAGCCAACAACAGTACCGGTCAACAA
AAATACCACAGATCTAACAACCAAAACCATCATCAACAATCTCACTCAAC
AAAATCTCAGCACCCTCCAACATCTAATAACCATTCAACAAACTACCAGC
AGCAATCAACGAAATCCTCAACAGTAGTAGACCACCATCATCAACATTCT
TCATCCTCGCATCGGGAACGAGCACATGATTCACATCATTCTCACCACCA
TAAAGATGAACACAACAATGACAAGAGATTGATGGCTGGTAAGGAATCAT
CTTCTTCGTCGAAAACAGCAATGGATAATTGTGAATATTGTAAAAGTAAT
GCACCTATTGCTGGTGCTATTCCTATTCAAACTGCAGAATGAATGAACTT
TGCCACGGTTGATAATCGAGTTGACCACGCTAATCCATTCACAAATCAAA
TCTTCCAAGAAGCTGTTATACGGAATGATAAAGCTATCGTAAAACTTCTT
CTCAAATACGGTATCTATCCAAAGAGAAACGAACGTAATCGTCAAGGTTT
GACTGCACTTCAGCAATGTGTTCTCGATGGAAACGGTCGAATGGCAATAT
TATTACTAGAAGCTGGAGCGGACATCGAGGCAAAAACATCAAACGGTTGG
ACTTGTTTACACATCGCTTCTGCATTAGGTGATCTTGACATGTTAGCCAC
CTTAGTAAACCATTGTTGTGATTTAGTAGCCTTGACTAAGAATGAGGAAC
TACCTATTGATCTTGCAGCATCTCGTGATATCAAAATCAAACTTGCTAAG
GAAATGTCACGTATCGGTTACAGTGAGTTAGCGCAATGGTATATGCGTAA
ACTAGCAGCCCGTGAAGGCGTTTTCTACGTACTTTCAGCTGATACTCTGT
TGGATTTAGCCTGTGAAGACAAACAAGAAGGAAGCCTGGGGAGTGAATTT
GCACGTCAATACAATCAACAACGTGAAATGTACATCCACTCTCCAATTCG
TAAACAAGACTCACAAGCTTTCCGTATTGATGCTTCACCGAAAAAGGATT
TATGGCTTGAAAACCCTGCCCAAGAACAAACGAAATATCTCACATACTCG
AGTGGTTATTTATCAGAAGTCGTTTTCGACCCAGCGTCAGGACAATATTT
AAAAGCACTTTCGTCAAACCCTCCATTGTTAGATTCACCGCAACGTAAAA
CTGTGATTGAAGAGAAAATTCAACTAGCTTCAATCAGTGAGGTAGACGGT
CCACCAATCAGCATGGAGGAATCTAAATCACGTAGTGGTACTTTAAAACG
AACATCTAGCAACAAACGACACAGTCAGAATCTACGTAAACAAAGCACAA
TTGAGCTACATATTGATTATTCACATACAacagaaagtgaaagtgatgaC
GACTGCGCTTTTGTAGCCGACCAATATGACGGATACCTTACTCAACCGTC
AGATGTAACCAACTCCTTACCTAATCGCCGGAAACCCAATAATGCCGATT
CTCATTCACCCGGACACTTAAAAACATATGAGAGAAGTTCATTTAAATCT
TCAGATCGACCTAGCTTGGAAAGTGTTGAGGAACATACTGGTTTGAGTAA
TGAGACACTTATTATTAAAGATACTCCTATTCGATCAGCCCTTGCTTCAT
CCAACGAAAGCAATAATCAGCCAGAGCTAACGGAACCGTACAGTACCACA
CCACCAACAGCTAATTCCACTCTTAGCAGTTCAGGGAGCGGTGGCAAATC
CAAGAACGTTAAGTTTAACCCGGTCGATAAGAACAATGAATTTTGTAATT
GTCCGACTTGCAAGAAACTTGGATATGCGTTTTCACCGGATATTCAAGTA
GGAAGCCGGAAACCACCGACGCTGCAACAAGCACCACAGCAAAGAGAACA
AGCGTCACATTTAACGGGTAAAACGCCACAGGAAATAATGCAGACAGGCG
CTGGGTATAATCAATTTTATTACCCTGAAACCACCACTGAAAAAGGAGGA
CTTTATTATGATCAAAGTGGTTATGAGTATAAGCCTCGCAAACGAAAGAA
GAAGCTGTTTTCAGGCATCAAGTCCATGTTTAAAGATAGTATCAAAGTGC
GGACCAATATGGACCCATCCCCTGCATGTGATGATGCTGGTATTCTTTTC
TCAGTGTCAGTTCGTGATCGTAACAAAGCCAAACAAATCCGACAACGACA
AGAAGTGCGTCGTAGCAACTCCTTCTCCGGTATGGAATCATCGTACAAAG
CTGCTCGAGATGAAGAGGTCAGTGTATTATCACATTCTCAAGTTGTTGCA
CCACCTGCTAAATTCTCCGATATCTATCAAGAAAGAGGGGTGTTTGACCC
TACTCAGTATGAAACCAAGATGGAGTCGTCGAGTCGCGTACAACAGGGAG
AGTACCCTCATCAATCTTCAAGCCAGCAGCAATATCAACAGTCACAACAA
CAAAACCAACAAAGGGGACGTGATCAAGCACCGTCTAATTATTACCAGCC
ACGAAACACGTACGAATCGAGTCGCCGTGAGAAACATCAATTCACACGTG
ACCTTCCACCTCCATCAATGAACGGTGCAATAGCAGATGATATGTTGTAT
TACACCGAGGAAGAAATCAATGCTTATTTAGATGCCACGACAACTCTCCC
ACATGGTTTCCACTACAGTCGCGCACCACAAACCAACAACTATCAACAAC
ATCCTCAGAACATCTTACAACAACACCCTAAACAAGCTGTTCCCATCCAA
CAACAAATTCCTCCATTAGCCAACAACAGTACCGGTCAACAAAAATACCA
CAGATCTAACAACCAAAACCATCATCAACAATCTCACTCAACAAAATCTC
AGCACCCTCCAACATCTAATAACCATTCAACAAACTACCAGCAGCAATCA
ACGAAATCCTCAACAGTAGTAGACCACCATCATCAACATTCTTCATCCTC
GCATCGGGAACGAGCACATGATTCACATCATTCTCACCACCATAAAGATG
AACACAACAATGACAAGAGATTGATGGCTGGTAAGGAATCATCTTCTTCG
TCGAAAACAGCAATGGATAATTGTGAATATTGTAAAAGTAATGCACCTAT
TGCTGGTGCTATTCCTATTCAAACTGCAGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031621XLOC_031621Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049867-proteinTCONS_00049867-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049867-exon-scaffold_167-1491911889:95789..96034TCONS_00049867-exon-scaffold_167-1491911889:95789..96034Clytia hemisphaericaexon
TCONS_00049867-exon-scaffold_167-1510915933:95789..96034TCONS_00049867-exon-scaffold_167-1510915933:95789..96034Clytia hemisphaericaexon
TCONS_00049867-exon-scaffold_167-1575043694:95789..96034TCONS_00049867-exon-scaffold_167-1575043694:95789..96034Clytia hemisphaericaexon
TCONS_00049867-exon-scaffold_167-1491911889:96315..99313TCONS_00049867-exon-scaffold_167-1491911889:96315..99313Clytia hemisphaericaexon
TCONS_00049867-exon-scaffold_167-1510915933:96315..99313TCONS_00049867-exon-scaffold_167-1510915933:96315..99313Clytia hemisphaericaexon
TCONS_00049867-exon-scaffold_167-1575043694:96315..99313TCONS_00049867-exon-scaffold_167-1575043694:96315..99313Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:95789..99313 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0350571 0.0113954 0 0.0388338 10.7633 9.7132 17.9384 19.1567 3.998 5.76941 4.36865 3.29204 3.62165 3.45442 2.59449 4.50755 10.4567 10.0165 4.60862 4.49761 10.1234 10.1512 2.45194 4.2878 6.42376 7.56942 5.84854 5.28409 0.103762 0.0925021
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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