TCONS_00049865 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049865
Unique NameTCONS_00049865
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049865 ID=TCONS_00049865|Name=TCONS_00049865|organism=Clytia hemisphaerica|type=transcript|length=1687bp
ACGAACATGATTCAAGGCTACAGcattttcaagatggcggcgaaATTTTC
GACGATTTCGTTTGTTTTTTTCCTTCTCTTTCAAACATCAAATTGTAATG
AGAGCGAATCAAGTCCTCTCTTGTTTAAGATAGAAGGCAAAGTATCAGTT
TCTAAAGACAGATCTAGACCAACAGATTGGCAAAGTGAAACATCAATCTT
GGTTGACAGCGGTGCTTATAAAGGATTTTTGAAATCAGATGGAACTTTTG
TGATTAACAACATCCCTTCAGGCTCCTACATTGTTGAGGTTGCATCAGCC
AATTATCTATTCGATAGATTCCGTGTTGATATCAACAAAGGTGGCAAGAT
CAGGGCGCGTCAGTTGAATCTATTACAACCAAAAGCTGTTCATGTTGTCC
CTTACCCACTACGATTTGTGGCATCTAAACCAGCCCCCTTCTTTGAGATC
AGAGAAACTATGAAAGTTACGGATTTCTTGTTCAACCCAATgGTAATAAT
GATGGTGCTACCTTTGATATTCGTTGTCATTATGCCTAAAATGATGTCAA
TGGCCGATCCTGAAGCCCAAAAGGAAATGCAAGAACAAATGGGAAAATAT
AATCAGCCACAAATTCCTGAACTTTCTGAAATGTTTTCCAACATGTTTGC
TGGGGGAGCTGAGAAGAAACGTACCAAACCATCACTAGCATCATCGGATA
GAGGTCCTGCTAAAAGATCAACTAAAAGACCAAGATAAGAGACTATTATT
AAATCTAGAGAGAAATCTCTGTTTTCCAATGCTTTAAAAGTCGTAATGGT
TCATGGTATTATGAGCAACTTTTATTGGCATTTTGACTCGAAGCTGTAGT
TCCAAagggaaaaaacatttttctatttAGCTAAAATGATTTGTAAGCCT
TGCAGAAGCTTACATGATGGAATTTTAAAATATCAACATTATTGAAACga
tgtttttttatcaaagataaatttttcacaaaagttgtcttgaACATGCT
cgaagttttaaatttttggtcTTGTGGTCGAATTTTTCTAATTGATTTTT
GGATATGCGAAGAAGACGAAAACATTCGTTTGTTATCGATTGTTATAAAC
AATATTCTAAATCTATTTTGACCGTTTTTCCTTAGGTTAGCAAAAATGGA
AGTCCTTATCTACCGaaaaaagggtttaaaatcgaTGTTCTTTATCTGAA
AGATTAACAGttattaaaatatttctaacaaaaatactcaatcaTCTGTT
TAACGATTTTTTGGGCAGGTGGTTTTTTCCTCgtatttaattaaaaaaag
ggaTGGGAATCTTTTTCAGAGAGAAGTAAATCcttgttattttttcttct
cttgGTTAATTTTGATTAATTCTTCTTTACTTTCTTTCATCTATCTTCAC
GTTAGTATCTCAGTAAAACCAATTTTATTTGTGCGTTTTTTTCCTGATCT
TAAACGGTTGGAAAATCGCATTAAGATTGTTTTAACTTTGATGAAAACTC
GAATAGAAGTCGGTCGGATTTCTCTTTGAAATCATAATCAGTTTACCTTA
ATGTTTTATTGACCTGAAAGATACCCAAGCGTGACAAACACCACCTGGGA
CATGCTATCAATACTTTTTTTGTGTCAGAATTATTTACTGAAAAGGTGTT
AGTATAGATtttaaaatgattgaataagatATTAAAC
Run BLAST on NCBI

protein sequence of TCONS_00049865-protein

>TCONS_00049865-protein ID=TCONS_00049865-protein|Name=TCONS_00049865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
TNMIQGYSIFKMAAKFSTISFVFFLLFQTSNCNESESSPLLFKIEGKVSV
SKDRSRPTDWQSETSILVDSGAYKGFLKSDGTFVINNIPSGSYIVEVASA
NYLFDRFRVDINKGGKIRARQLNLLQPKAVHVVPYPLRFVASKPAPFFEI
RETMKVTDFLFNPMVIMMVLPLIFVVIMPKMMSMADPEAQKEMQEQMGKY
NQPQIPELSEMFSNMFAGGAEKKRTKPSLASSDRGPAKRSTKRPR
Run BLAST on NCBI

transcript from alignment at scaffold_167:78201..95364+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049865 ID=TCONS_00049865|Name=TCONS_00049865|organism=Clytia hemisphaerica|type=transcript|length=17164bp|location=Sequence derived from alignment at scaffold_167:78201..95364+ (Clytia hemisphaerica)
ACGAACATGATTCAAGGCTACAGcattttcaagatggcggcgaaATTTTC
GACGATTTCGTTTGTTTTTTTCCTTCTCTTTCAAACATCAAATTGTAATG
AGAGCGAATCAAGTCCTCTCTTGTTTAAGATAGAAGGCAAAGTATCAGTT
TCTAAAGACAGATCTAGACCAACAGGTAACTTAAAGTCGTTTTTTTACAT
TAACTATTGCATGGAATAAGACCGAGTTTTAAAATTTATGGTGGGACAAC
CTCTCAGAAgctgatcgatcctatcgagcgtgGGAGTCtggaaaaagaaa
gtattaataaaaaacgataaaattagcttctcttgaaaactaaaaacaat
aattttcacTCATCTCTtggaacaagcacttcaaaagataGCCTAGATAT
CCAGACcataaactatttcaccgtctagtttcttataatcttgtctctgg
tttacggtctggtccaagtaactcgtctgcagggatatctgtccctgcat
atgcgagtatctctaattggtcagtacgcgcccagtcaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNgttcgattgatgtttgatgagttcgattgatgtttgatgagttc
gattgatgttcgatgagtttgattgatgttcgatgagtttgattgatGTT
CAATGACTTCGATTGTCGTTTAAAAAAGCATGTAATTGTAAATAGCATTT
TCCGTTTTTCGTCcaacagggatgagctggagcTTTTTTATTATGTATGC
TTCATTCATTgctcatttgaagtaatagagatgacactttctttaaagaa
agtgataaaaattaaaatcttttttttacaaattaacgaCCAACTAAATC
gtaaaagagcttgtaaaatctccagcttgtcccatctgATGGGGTAGATA
TTGGATAGCCCGCAAGAATTGCCcatgggcggccgccaatacgccctcgg
aatataaataaaaaattgggcggCAAGGTACAACAAGGTATAAGTCGAAC
TAaagctataagcaaaaagctcatACCCATGTCTTTTTTTAGCtgttaaa
gcataataatttgagttaagttgttttttaggacatgaaacttggatatt
caaaatctagTCAAAATTCCACTTCCACTGGATATATAACATGATAGGGT
TATTTTCAggttacttttgttttttttttggatttcggcCTAAAAATGAC
CCAATTTTGGCCCAAAAAGTGATGTCCAACACCAAAAACACAAATAGGAA
ATTATTTTTCTGAATTTGTAAGAAACATTAATATTTTAATGTCAATTGTC
ATAAATACATACAAGAATGAGAAAAATTAACTTTGAAAGTTAAAACATGC
ACTAAATCCTACTTTAATCGTAGAAAGGGCTTTTTACTTCCTTTTAAATT
TCCTGTTTTTCTTAGAACAGATCGCTATTTTTAGCTGAGCGATCTTTTCA
AGTCATCTCTATACAAAAAAGCAAAGCAAAAAGCCTTATCGAAAGAGAAC
ACCATAATATTTCATCGCAGAGTAACTTTTTGAATCCATCAAAGCAATTA
AAATAGTAGCAATCTTCAAATCTCAGGACATCTAAAAACTTGATTTTTCC
TTTGTTAGACGTAATAAAATACTTACCATTGTTTAAAGAATGAGTTCTTG
TAATCACTTGGGAATATAACTACTACTCGCATCGTGTTTACAACATATTT
CTCATCTCTTTACTTTTTTCTACTGTGTAGGAGTGCCAAACATGGAATTT
CTTTTAGGAAATCTGAGAAACTTCATcatagaaatattttcaatcttttg
CTGTATTTTCGGACTGCAAGTGTTGGGATAACAGAAATATATATCATCGT
GTTCCTAATAAGAGTTGCAAAACGAatattgtattttcattttcaccacA
ACTTATTATTGAACATTTTAAGTACCTAATGTTATAAGAGCATTGGTCTG
ATGGTAATGTGGCCCACACATGGAATCTCTAGGGGTATGTAGTCATATCA
AATCTTATTGATTCTGATCAATATTGATATGGGCAAGCTttaaacagtca
ttttttcTGATATATCAGGTACTCAAATTTTTCTAGAGGgggttttcatt
caaaatgtgaacggaaaataaggtttaaaaaaaaagatcaacaTCACTGT
ACAATGATTCAATCATGAAGTTTTCTCAGCCTCCAAGCTGCATTTTTagg
tttctttgacaaatttttgcattttttaagATAACTTCAAGTTGGTTTCA
ACCAGAAAAAAATCTGATAATTTTCTATTGGGAAgatttcactttatttt
tctctttcatttttatttcttgttGCGGATATAACTTTTTTGTCTAAAAC
GTTGCTGATGAAGTGTATTTGCAAGCTGGCATGCAGTTTTATTATATGGA
AGTAATGCCAAAgctattagaaatagaaaacaaatactCTGATGTCAAGT
TGAggtccaaaatgaaaattttaatagaaaaaataatctttgtttttctt
tgaaaaagatGGTTTTGAGCCTGACAGCTTGAATAAAAGTTAAATGCATT
AATTGCACATTAGTCTAAACTACAAagaattttttgccaaatttgtctCA
TTATAACTACTCTAGGTCGAATTTCTTGACTAAGCATGTTTGATTAAGCT
CTGATATTtgtattttctaaaaattgaagtctttaatgaaaaatttatct
AAGGATAAAATTGAActtaaaaactttactttttccaattttgttCACCT
TTTTGGGTGATATTACCAGATTAACGCTCATAAAagcctttgatctttct
ttttggacctacctccgggtaccccggtggaggttctataaattaaccca
tatccgttcgtccgttcgttcgtccgtccgtccgtctgttaccagctttt
ctcaggattggctcattagttttttctgattttttgcacaatgatgcaaa
atagcaatgcccaaaacgtgacggagcccaatttttgagaaaaaatttat
ttgggcaaatttgggccaaaaactacctaaaagtagggctttttggactt
tgtgcaaaatcctgtcattacttttttctgattttttgtagaaagatgga
gtgcaagattctctaaagaatgactgaagtggtttttcctggaaaattct
tattcgccttaaaatacggattttcgtatttttggggaaattccctttaa
ccaaataagaaaatatagcttttctcaaagttgactcattatttttttct
gattttttgcacaatgatgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctg
attttttgcacaatgatgcaaaatggcaatgcctaaaatgtgacggagcc
cgattttcgaaaaaaaatatatttgggcaaatttgggccaaaaactggct
aaaaatagggttttttggacactgtgcaaaatcctgtcattacttttttc
tgatattttgtacaaagatggagggcaagattctctaaagaatggctgaa
gtggtttttcccggaaaattcttattcgccttaaaaaacggattttcgta
ttttggggaaattctctttaaccaaataagaaaatatagcttttctcaaa
gttgactcattattttttttgcacaatgatgcaaaatggcaatgcctaaa
atgtgaaggagcccgattttcgaaaaaaaatatatttgggcagatttggg
ccaaaaactgcctaaaaatagggttttttggactttgtgcaaaatcctgt
cattacttttttctgattttttgtacaaagatggagggcaagattctcta
aagaatggctagcggtttttcctggaaaattcttattcgccttaaaagat
ggattttcgtattctggggaaattccctttgactaaataagaaaatatag
cttttctcaatgttgactcataatttttttctgattttttgcacaatgat
gcaaaatggcaatgcccaaaatttgaaggagccagatttttaaggaaatt
tttttgggcaaatttgggccaaaaacagcttaaactggcttaaaaggttt
tttgggcctgaatggtttaagtgattttcgtatttggggaaattcctttt
taccattttacattattcaacacacaagNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNt
ttttccattctgaatttttgtacaattattgtcacttttttcttattttc
atctgatgttaatcattaggtaggtccattcagcatgttgcttgttttct
tttgtttagtgtGGCGCTAAATGATgagattactcattttttttgcCGTT
TGAAATATGACATGTATGTGCTCGACTGAcctgttttttgttttcttgtt
gcacattttctttttttttatcatttgattttttgtgtgTATTGAGATTC
TTTTTTGGTGTGTTTTAAATATACAtggtgttttcttttcaaattcagtc
GCTCCATTCGTCATGTGAAATTTTTCAGTCTGTGGGCCTAGACTGGGGCt
ctgttattatcagttagagTTAGgattggagctcgagagtcacaatatag
gGCTGAAGACCTTCTTAGGAGCACCCATACCCTGATACTTAACCTAGGTT
CCCATAGGCAGGCTAGCTCTCAAGCTCTAAAAAAGCATCTAATAACataa
aaaccagaatatgatacTTCAATGGAAATCAAAAGATATAAAAGTGCact
cacaaacatcaatttgtcagatctaacaaaattgaTAATGGCACTGTCAT
CACTGACATCAttaattttctgtcaagaaccttgtaaacattccaacaac
ttccatcgttGAAATGATCTGCCGCAGCTAAgttgaggattgagccgaga
acgctcccaGAACGCCCGTGAGCTCCCGcacgggtgaaaaactttaatct
gtcaatctgtctttctcaagcgaagagtacgcgaagggacgctacaatct
ttcaagaaatatattgagaattccggttattttgacgtttttcgagattt
aaagttcgggcgaaaaagccgattttgggctatctcttNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNgagatcctaaggtcctaagtcttaagtctagcgttaaaac
tcagagttaaaactctacccttcgaacctactttagagcacttacaaatc
gattgtggtttcaaaacaccccggtggatttcccttttgtctcaaatatt
tcttgaaggattgtagCTTTACGATAGTCCTGCGGATCATCATCGTCCGT
CAAAGATATTTGCTAATATTTCAGAGACGAAACAAAGACTGATTCCTGAC
TGATACCTTCTGCCACAGTACCAAATCCACAAAAACTCAAGTTCTAATTC
CTAACACATCTTCTTCCATGGCAATTTGAAGACAGTTTGTCTTGTTTACA
AACCCATGGTACAGATTTGGTACAATTCACCCCCTACTCTTGGgtggggg
gtttggaataagcaggggggttggaataagaatgtcctgggtggaaaatt
taattagcgcccccccccccccggctattaggtacccgagaataGTAAGG
CTGCGATCACAAATAACTTCTGATTGGATCgtttttaggtaaaaaaatgA
GTTGGTTGATCGGGgcataaaattcaaaacagcCGGGTCACTAGTCGTTG
ATTCTGTAGAAGTCATGATGAAATTGTTGAGTACAAACAGCTTGGATAAA
TCCCAGGGGGGTCAATATTCATAATACCACCAATAGCCCAAATgcctgac
ttttgaccttttgaacTTGCCCTGAAATTGGTATCATTACCAACttaaaa
atcatgattttcaaaacaataCCTATCCCTTTAGTTTGGTATTAATACCA
ACTTGACCTTCAGGGGAGCAAAATTTCAAGgatatacatgtttttctttt
tataaccataacgcttataagcatatgaaggctcacgtttgcagaattcc
taaacataacataagcatatgtgtcagcctgaaatatttttccagttgtc
atttttatctgtttaaaaaggtttttaaaaaaaagactttccacggtttc
ctacattccactgctcccaaaatctgaacaaatttttacaaaatttctga
aatttcactttAAAACTTTGGCTcgaggtgaatcataagcatgattcata
agcatcTAATAAGCATAacctatgcctggatgcttcgAGAACTTAGACTT
ACATatacgagcctgaccaaggggtatacacttgcttataaaaagaaaaa
catgtagaAGTAGTCTAGCGACGAAATGGTCTTTTTTTGGTTCAAGCTTT
ACAAGTAGTATGTGtaggtttttggacctaccgggaggtcctttaatttg
accgttgtccgttcgtctgttacaagcttttctcgggattggctcattat
ttttttttaattttttgcagaatgatacaaaatggcCATGCCttaaaagt
gacggagcccgatttttgaaaaaagtttttggggggaaaatttgggccaa
aaactacccaaaaataaggttttttcgacttggtgcaaaattgcttcatt
agtttttcctgatttttggcagaaagatagaggtCAAGggaccctaaaat
gtggctgaaggaatttttctcggaaaatttttctttcgtcgtcaaatacg
gattttcgtttttttggggaaattctcttttaccattttcctgttagcag
cttttctcgggattgactcattagttttttttaattttttgcagaatgat
acaaaatggcCATGCCttaaaagtgacggagcccgatttttgaaaaaagt
ttttggggggaaaatttgggccaaaaactacccaaaaataaggttttttc
gacttggtgcaaaattgcttcattagtttttcctgatttttggcagaaag
atagaggtCAAGggaccctaaaatgtggctgaaggaatttttctcggaaa
atttttctttcgtcgtcaaatacggattttcgtttttttggggaaattct
cttttaccattttcctgttagcagcttttctcgggattgactcattagtt
ttttttaattttttgcagaatgatacaaaatggcCATGCCttaaaagtga
cggagcccgatttttgaaaaaagtttttggggggaaaatttgggccaaaa
actacccaaaaataaggttttttcgacttggtgcaaaattgcttcattag
tttttcctgatttttggcagaaagatagaggtCAAGggaccctaaaatgt
ggctgaaggaatttttctcggaaaattttttttcgtcgtcaaatacggat
tttcgcttttttggggaaattcccttttaccattttcctgttagcagctt
ttctcgggattgactcattagttttttttaattttttgcacaatgataca
aaatagcaatgcctgaaaagtgaccgagcccgatttttgaaaaaattttt
tggggggcaaatttgggccaaaaactacctaaaaataaggttttttggac
ttggtgcaaaattgcttcattagtttttcctgatttttgtcagaaagata
GAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaccaagttacacaatgataaaagaaaataaatcagacgttt
ttgcattgttctaaaacttattgtgtttgctcaataccaatagtaaaatg
tagaacacctctgattttgatcaacaggtaggtccattcagcatgttgct
tgtttttaattttttgcacaatgatacaaaatagcaatgcctgaaaagtg
acggagcccgatttttgaaaaaaaattttggggtgcaaatttgggccaaa
aactacctaaaaataaggttttttggactttgtgcaaaattgcttcatta
gtttttcctgatttttggcagaaagatagagtgcaagNCccgattttgaa
aacaaatttggggggcaaatttgggccaaaaactacctaaaaataaggtt
ttttggacttgcttggtgcaaaattgcttcattagttttccctgattttt
gtcagaaagatagagtgcaaggtaccttaaaatgtggctgaagtaatttt
tctcggaaaattttttttcgtcgtcaaattttcaaaaaaagacgaccaag
ttacacaatgataaaagaaaataaatcagacgtttttgcattgttctaaa
acttattatgtttgctcaataccaatagtaaaatgtagaatacctacttt
tatctgattttgatcaacaggtaggtccattcagcatgttgcttgttatt
ttttttttcattatgcTCTAGGGTCCCTAAGGActggcaaagctggggaa
atTCTTTGATGGAGCATTCATGGGGTAAGTAAGGGGTCATTTTGGACCCT
TTGAAActcattttttgaaagcttttattgacaaaattgataCTATCATT
AAGTGATAAGGCTGAAAGAAAAGATCTAAAAGATGGGTTTACTGtctgat
tttttcgaaaaagtcctatggaaatggaaaaatatttatGTGAGTATTTT
TGAGACTTTTTGAGGAAAATATCCAGTCAAAGAAATTCTataaatgggct
cttccagaaaattttttacatggggggtggaggatatattgtccggtgtg
taaatttgctctgtccgggggtaatttggtgtgtccggggggtcagcaga
tgcttgtccgggggtaaaacctattgtccggggggccaaaagtccaGGGG
ATAagtcactaaaaattgttatatccttcacccccccatgtgattttttt
ttctggaagagcccaatatatTATTGGATAATACTCTTCGAGATTTTGAG
AGCCTGTTTAAAGGAATTTTCAGTACGCCTATAAGATCCAGACcagattt
tatttgatttgttttggtatGGGCTGaagtttcaatttcaattctgGGTT
GTCTTAGTGCTCTAGTAATTTTTAAAGCATGTTGACAACACAGAACTTCA
TTTTGAGTATATTTCAATAAGACACCATTCAAAtacaacacccccttctc
acagacccactggcaccccttcccattggaaaaaaaatgtccaaaatatc
gtccccggtggaaaattatcctccaatttttgtcaccaatgaaatcaaat
aaaccaatcctcactgcaaaatattatgctatttttcctatccccactga
attttttgacttgaaagcaaaggaattgaaatccccagccataagaaata
ttggaatattaatccccatcgagtttcagtccagTTCAGTCTTTTATAAG
TTTTGCAAATATATGTACTAACTGTACGGAGAGGAGGTCAAATTTGGCGT
ACTGGTTGGTTATTTTAAGGCATTGTAACAACATTTAGAGAACTTCAGAT
attattaaaacttttttttcgttttagagCTTCCCCTGAGCTCCAAAACA
AACTTCATtgactctgaaagtttttggcCATTTTACATTAATTTATTTTG
ATGTAATGAGTCAACAAAACTCGAGTCACAACTCGAAATTACCAAACTCA
TCCCCAGTTGTGATGTTGTTTGGAGGGCGTTGTAATCTGTTAGATTACCT
TTGCCCATTGCGGATTTTGTTATCAACAACTTAGTTTCTGCATTCAGCTT
ACTGAGGATTAAAgaatttatgcttaaaaaagaagaattagtATAAAGCA
ACAAAATTGCTAAGcatgtaaaaaaagttttatctaNTTATGCTTAAAAA
GAAGAATTAGTATAAAGCAACAAAAGTGCTAAGtatgtaaaaaaagtttt
tctaagaATATTAGAGAGGTATAATAAGTAAGTGTTTTATAGTAAAAAGC
GGATTTCAGGAGATTGTGAAGAGAGCTtggatataaaaataaataattta
aactaaaaaattattggctattataaaaagataacataagaattaaaaaa
atacttgggTTTGTATTACTAAAACGTAATATATGCGGCGCGTGTGTATA
GTGCGATAATATGAGGAGCCTAACCAGGCTCTCTCCCAActgtttaaaag
tttaaaaaataggtcgttttttataaaaattaccaAACTCATCCCCATCG
TAAACCGGTTTATAAAAATAGTCTTTTGGCTAAAGGTGAAGTTTTCTTAG
CAAATTTGTGAATCTCAatgattcttatttttttatcaaaatttttaaga
aaagaaGACACTAGAGAaggaatttttgatatttttgaaccTACCTGGAG
gccctttaatttgaccgttgttcgtccgtccgtccgtccgtccatcCGCC
CGTCCGTCCGCCCGTCCGCTTTTCTCGGGATCAgctcattattattatta
ttttttttgcacaattatGTAAAATAGCAAGGTCTAAAAAGTgagagccc
gatttttgaaaaaaaatttttgggcaaatttgggccaaaaaaactaccta
aaataaggttttttttcttcaaaattcctTCATTAGCTTtgcctgatttt
tggcagaatgatagagtgcaaggcaccctaaaatCTGGCTGAAGTgattt
ttcttggaaatttttttttcgttgtaaaatacggattttcgttttttggg
ggaaattcccttttaccattttcctgttgccagcttttcttgtgattggc
tcattagttttttcagatattttgcacaaagatagagGGCAAAGTTCTCT
AAAATATGGCTCAAGTCGTTTTttccggaaaaattttttggcaGATTTTT
GCCGTAAAAATTNGTTTGATGGCTCAAGTcgttttttccggaaaattttt
tttgcagatttttgccgtaaaaattggattttcttatttagggaaattcc
gtttggtcatttttagggaaaatgagcatttctcgcgattggctttgtat
ttttttctgactttttgcacagTGATATAAAATAGTAATATTTAAAACCT
GATGAAAtgcgattttcgaaaaattttttgggcaaatttgggccaaaaag
tgcctaaaagtGGGGTTTTCTGGGCTTTGTGTGAAAGTGCTTCAACagtt
tcttctattttttttgcACAGAGATAGAGCAAGGTTCTCAAAAAAATGGC
TCACTGCGTTTTTTccggaaaaatttttcttaCTGTATAATTcggatttt
tttatttggagAAATACTCTTCAGTAAATTTTAGGGGAAATGAGTATTTC
TCACGATTGACTtggtatttttattattttttgtcaatCCATAAAATCTA
TCCCTCAAGGTATTCTTAAGATAATCTTAACATTTAGTCAATTTTCACCC
TAATATTCTTTTAagcactattcttataaagaaagcgTGTATTTCCCCAC
AAAAGATTTGATTCAATAAGGGCTCAGCAAACTCTCAACTACTATTGTCG
CACTCATTCCCACGATCTGTGCCGTCATagccaaatttgaatttgaaatt
tggttTCTTAATATTGTCCCTAATATTGGAGGTTCTGTGCTTCGTTGCGC
TcaaaaaattaccggccaactgaaatttccttatttgcagTACTGAGTAA
AACGTGAATTATTatattttccttttgtttttttctcacaCTTATAGATT
GGCAAAGTGAAACATCAATCTTGGTTGACAGCGGTGCTTATAAAGGATTT
TTGAAATCAGATGGAACTTTTGTGATTAACAACATCCCTTCAGGCTCCTA
CATTGTTGAGGTTGCATCAGCCAATTATCTATTCGATAGATTCCGTGTTG
ATATCAACAAAGGTGGCAAGATCAGGGCGCGTCAGTTGAATCTATTACAA
CCAAAAGCTGTTCATGTTGTCCCTTACCCACTACGATTTGTGGCATCTAA
ACCAGCCCCCTTCTTTGAGATCAGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttt
tttttttttttgtcaatccaTAAAATCTATCCCTCAAGGTATTCTTAAGA
TAATCTTAACATTTAGTCAATTTTCACCCTAATATTCTTTCAagcactat
tcttataaagaaagcgTGTATTTCCCCACAAAAGATTTGATTCAATAAGG
GCTCAGCAAACTCTCAACTACTATTGTCGCACTCATTCCCACGATCTGTG
CCGTCATagccaaatttgaatttgaaatttggttTCTTAATATTGTCCCT
AATATTGGAGGTTCTGTGCTTCGTTGCGCTcaaaaaattaccggccaact
gaaatttccttatttgcagTACTGAGTAAAACGTGAATTATTatattttc
cttttgtttttttctcacaCTTATAGATTGGCAAAGTGAAACATCAATCT
TGGTTGACAGCGGTGCTTATAAAGGATTTTTGAAATCAGATGGAACTTTT
GTGATTAACAACATCCCTTCAGGCTCCTACATTGTTGAGGTTGCATCAGC
CAATTATCTATTCGATAGATTCCGTGTTGATATCAACAAAGGTGGCAAGA
TCAGGGCGCGTCAGTTGAATCTATTACAACCAAAAGCTGTTCATGTTGTC
CCTTACCCACTACGATTTGTGGCATCTAAACCAGCCCCCTTCTTTGAGAT
CAGAGAAACTATGAAAGTTACGGATTTCTTGTTCAACCCAATggtaattt
attttattttgaaaatctcatGTTTCTGGTATTGTTGACAATACTTCCCA
AATAATTTGAGTAGAGGATTTCTCGGACTTCAATGAGCAGAGACGTGTAA
ACCTTACTTTATCTCGTCCAGTCACTAGGATACTACTATTACTACGCAAT
ACTTGATGATTGACTAAAGTTATTCGAACCAGACTATTCTATTCTAATGT
AAGCTTTAGTTTTCATCATAAACTTCTCAAGTTCATCCAAAATGACCAAT
TGGATCTTTCTTGACGTTGTAGGTAATAATGATGGTGCTACCTTTGATAT
TCGTTGTCATTATGCCTAAAATGATGTCAATGGCCGATCCTGAAGCCCAA
AAGGTAAcctaaaaatgaattattttaCTTCTGAAGTAGTCTTCTGAGAG
TATCAAAGCCGCTAATTTATTATATGTCAATTCCTTTGCTTGGTCAATGG
TTTTTTAgaccctaaattcggttaaagaCCTTTTTTGCAAGCCATATAAC
ATATCAAGGAACCGGCCTTGTAATACATGCATTTAGATGTGTCTGAAAGT
CATACAATgggttttagaatttttacTTTATCTTTTAAATCAAAGAGGAT
ATatcttttggttttatattgAACGTGACTGGGTAGCTCATTCGGTAGAG
CATTAACTTTACAAACTAAGGTTGtcggttcgatccccggtcatcACCAC
CTCAGCAGATGAGTAGCTTTGATTNAGAAACTATGAAAGTTACGGATTTC
TTGTTCAACCCAATggtaatttattttattttgaaaatctcatGTTTCTG
GTATTGTTGACAATACTTCCCAAATAATTTGAGTAGAGGATTTCTCGGAC
TTCAATGAGCAGAGACGTGTAAACCTTACTTTATCTCGTCCAGTCACTAG
GATACTACTATTACTACGCAATACTTGATGATTGACTAAAGTTATTCGAA
CCAGACTATTCTATTCTAATGTAAGCTTTAGTTTTCATCATAAACTTCTC
AAGTTCATCCAAAATGACCAATTGGATCTTTCTTGACGTTGTAGGTAATA
ATGATGGTGCTACCTTTGATATTCGTTGTCATTATGCCTAAAATGATGTC
AATGGCCGATCCTGAAGCCCAAAAGGTAAcctaaaaatgaattattttaC
TTCTGAAGTAGTCTTCTGAGAGTATCAAAGCCGCTAATTTATTATATGTC
AATTCCTTTGCTTGGTCAATGGTTTTTTAgaccctaaattcggttaaaga
CCTTTTTTGCAAGCCATATAACATATCAAGGAACCGGCCTTGTAATACAT
GCATTTAGATGTGTCTGAAAGTCATACAATgggttttagaatttttacTT
TATCTTTTAAATCAAAGAGGATATATCTTTTGGTTTTATGTTGAACGTGA
CTGGGTAGCTCATTCGGTAGAGCATTAACTTTACAAACTAAGGTTGtcgg
ttcgatccccggtcatcACCACCTCAGCAGATGAGTAGCTTTGATTGGGT
AAACTAGGTGATCTAGGCgttaagttactgggagcttaGGATAGGTGTGG
CGTTCCACCTCAGCATTTGACCTCCTAGGTCTAGCGTCGATAGGTAGATA
AGGGGACATACTGTCTCATTTCCGGTTTCTTcagccgacagccaccagat
gaatatgcTTACTTATTTTATATTGGCCGCACTTCGTTTATGGTCCAAAA
CCTGTGAATGATAGCTAAAGATAATAAACTTTGTGACTTTTCTTCCACAG
GAAATGCAAGAACAAATGGGAAAATATAATCAGCCACAAATTCCTGAACT
TTCTGAAATGTTTTCCAACATGTTTGCTGGGGGAGCTGAGAAGAAACGTA
CCAAACCATCACTAGCATCATCGGATAGAGGTCCTGCTAAAAGATCAACT
AAAAGACCAAGATAAGAGACTATTATTAAATCTAGAGAGAAATCTCTGTT
TTCCAATGCTTTAAAAGTCGTAATGGTTCATGGTATTATGAGCAACTTTT
ATTGGCATTTTGACTCGAAGCTGTAGTTCCAAagggaaaaaacatttttc
tatttAGCTAAAATGATTTGTAAGCCTTGCAGAAGCTTACATGATGGAAT
TTTAAAATATCAACATTATTGAAACgatgtttttttatcaaagataaatt
tttcacaaaagttgtcttgaACATGCTcgaagttttaaatttttggtcTT
GTGGTCGAATTTTTCTAATTGATTTTTGGATATGCGAAGAAGACGAAAAC
ATTCGTTTGTTATCGATTGTTATAAACAATATTCTAAATCTATTTTGACC
GTTTTTCCTTAGGTTAGCAAAAATGGAAGTCCTTATCTACCGaaaaaagg
gtttaaaatcgaTGTTCTTTATCTGAAAGATTAACAGttattaaaatatt
tctaacaaaaatactcaatcaTCTGTTTAACGATTTTTTGGGCAGGTGGT
TTTTTCCTCgtatttaattaaaaaaagggaTGGGAATCTTTTTCAGAGAG
AAGTAAATCcttgttattttttcttctcttgGTTAATTTTGATTAATTCT
TCTTTACTTTCTTTCATCTATCTTCACGTTAGTATCTCAGTAAAACCAAT
TTTATTTGTGCGTTTTTTTCCTGATCTTAAACGGTTGGAAAATCGCATTA
AGATTGTTTTAACTTTGATGAAAACTCGAATAGAAGTCGGTCGGATTTCT
CTTTGAAATCATAATCAGTTTACCTTAATGTTTTATTGACCTGAAAGATA
CCCAAGCGTGACAAACACCACCTGGGACATGCTATCAATACTTTTTTTGT
GTCAGAATTATTTACTGAAAAGGTGTTAGTATAGATtttaaaatgattga
ataagatATTAAAC

Coding sequence (CDS) from alignment at scaffold_167:78201..95364+

>TCONS_00049865 ID=TCONS_00049865|Name=TCONS_00049865|organism=Clytia hemisphaerica|type=CDS|length=3690bp|location=Sequence derived from alignment at scaffold_167:78201..95364+ (Clytia hemisphaerica)
ACGAACATGATTCAAGGCTACAGcattttcaagatggcggcgaaATTTTC
GACGATTTCGTTTGTTTTTTTCCTTCTCTTTCAAACATCAAATTGTAATG
AGAGCGAATCAAGTCCTCTCTTGTTTAAGATAGAAGGCAAAGTATCAGTT
TCTAAAGACAGATCTAGACCAACAGATTGGCAAAGTGAAACATCAATCTT
GGTTGACAGCGGTGCTTATAAAGGATTTTTGAAATCAGATGGAACTTTTG
TGATTAACAACATCCCTTCAGGCTCCTACATTGTTGAGGTTGCATCAGCC
AATTATCTATTCGATAGATTCCGTGTTGATATCAACAAAGGTGGCAAGAT
CAGGGCGCGTCAGTTGAATCTATTACAACCAAAAGCTGTTCATGTTGTCC
CTTACCCACTACGATTTGTGGCATCTAAACCAGCCCCCTTCTTTGAGATC
AGAGAAACTATGAAAGTTACGGATTTCTTGTTCAACCCAATgGTAATAAT
GATGGTGCTACCTTTGATATTCGTTGTCATTATGCCTAAAATGATGTCAA
TGGCCGATCCTGAAGCCCAAAAGGAAATGCAAGAACAAATGGGAAAATAT
AATCAGCCACAAATTCCTGAACTTTCTGAAATGTTTTCCAACATGTTTGC
TGGGGGAGCTGAGAAGAAACGTACCAAACCATCACTAGCATCATCGGATA
GAGGTCCTGCTAAAAGATCAACTAAAAGACCAAGATAAACGAACATGATT
CAAGGCTACAGcattttcaagatggcggcgaaATTTTCGACGATTTCGTT
TGTTTTTTTCCTTCTCTTTCAAACATCAAATTGTAATGAGAGCGAATCAA
GTCCTCTCTTGTTTAAGATAGAAGGCAAAGTATCAGTTTCTAAAGACAGA
TCTAGACCAACAGATTGGCAAAGTGAAACATCAATCTTGGTTGACAGCGG
TGCTTATAAAGGATTTTTGAAATCAGATGGAACTTTTGTGATTAACAACA
TCCCTTCAGGCTCCTACATTGTTGAGGTTGCATCAGCCAATTATCTATTC
GATAGATTCCGTGTTGATATCAACAAAGGTGGCAAGATCAGGGCGCGTCA
GTTGAATCTATTACAACCAAAAGCTGTTCATGTTGTCCCTTACCCACTAC
GATTTGTGGCATCTAAACCAGCCCCCTTCTTTGAGATCAGAGAAACTATG
AAAGTTACGGATTTCTTGTTCAACCCAATgGTAATAATGATGGTGCTACC
TTTGATATTCGTTGTCATTATGCCTAAAATGATGTCAATGGCCGATCCTG
AAGCCCAAAAGGAAATGCAAGAACAAATGGGAAAATATAATCAGCCACAA
ATTCCTGAACTTTCTGAAATGTTTTCCAACATGTTTGCTGGGGGAGCTGA
GAAGAAACGTACCAAACCATCACTAGCATCATCGGATAGAGGTCCTGCTA
AAAGATCAACTAAAAGACCAAGATAAACGAACATGATTCAAGGCTACAGc
attttcaagatggcggcgaaATTTTCGACGATTTCGTTTGTTTTTTTCCT
TCTCTTTCAAACATCAAATTGTAATGAGAGCGAATCAAGTCCTCTCTTGT
TTAAGATAGAAGGCAAAGTATCAGTTTCTAAAGACAGATCTAGACCAACA
GATTGGCAAAGTGAAACATCAATCTTGGTTGACAGCGGTGCTTATAAAGG
ATTTTTGAAATCAGATGGAACTTTTGTGATTAACAACATCCCTTCAGGCT
CCTACATTGTTGAGGTTGCATCAGCCAATTATCTATTCGATAGATTCCGT
GTTGATATCAACAAAGGTGGCAAGATCAGGGCGCGTCAGTTGAATCTATT
ACAACCAAAAGCTGTTCATGTTGTCCCTTACCCACTACGATTTGTGGCAT
CTAAACCAGCCCCCTTCTTTGAGATCAGAGAAACTATGAAAGTTACGGAT
TTCTTGTTCAACCCAATgGTAATAATGATGGTGCTACCTTTGATATTCGT
TGTCATTATGCCTAAAATGATGTCAATGGCCGATCCTGAAGCCCAAAAGG
AAATGCAAGAACAAATGGGAAAATATAATCAGCCACAAATTCCTGAACTT
TCTGAAATGTTTTCCAACATGTTTGCTGGGGGAGCTGAGAAGAAACGTAC
CAAACCATCACTAGCATCATCGGATAGAGGTCCTGCTAAAAGATCAACTA
AAAGACCAAGATAAACGAACATGATTCAAGGCTACAGcattttcaagatg
gcggcgaaATTTTCGACGATTTCGTTTGTTTTTTTCCTTCTCTTTCAAAC
ATCAAATTGTAATGAGAGCGAATCAAGTCCTCTCTTGTTTAAGATAGAAG
GCAAAGTATCAGTTTCTAAAGACAGATCTAGACCAACAGATTGGCAAAGT
GAAACATCAATCTTGGTTGACAGCGGTGCTTATAAAGGATTTTTGAAATC
AGATGGAACTTTTGTGATTAACAACATCCCTTCAGGCTCCTACATTGTTG
AGGTTGCATCAGCCAATTATCTATTCGATAGATTCCGTGTTGATATCAAC
AAAGGTGGCAAGATCAGGGCGCGTCAGTTGAATCTATTACAACCAAAAGC
TGTTCATGTTGTCCCTTACCCACTACGATTTGTGGCATCTAAACCAGCCC
CCTTCTTTGAGATCAGAGAAACTATGAAAGTTACGGATTTCTTGTTCAAC
CCAATgGTAATAATGATGGTGCTACCTTTGATATTCGTTGTCATTATGCC
TAAAATGATGTCAATGGCCGATCCTGAAGCCCAAAAGGAAATGCAAGAAC
AAATGGGAAAATATAATCAGCCACAAATTCCTGAACTTTCTGAAATGTTT
TCCAACATGTTTGCTGGGGGAGCTGAGAAGAAACGTACCAAACCATCACT
AGCATCATCGGATAGAGGTCCTGCTAAAAGATCAACTAAAAGACCAAGAT
AAACGAACATGATTCAAGGCTACAGcattttcaagatggcggcgaaATTT
TCGACGATTTCGTTTGTTTTTTTCCTTCTCTTTCAAACATCAAATTGTAA
TGAGAGCGAATCAAGTCCTCTCTTGTTTAAGATAGAAGGCAAAGTATCAG
TTTCTAAAGACAGATCTAGACCAACAGATTGGCAAAGTGAAACATCAATC
TTGGTTGACAGCGGTGCTTATAAAGGATTTTTGAAATCAGATGGAACTTT
TGTGATTAACAACATCCCTTCAGGCTCCTACATTGTTGAGGTTGCATCAG
CCAATTATCTATTCGATAGATTCCGTGTTGATATCAACAAAGGTGGCAAG
ATCAGGGCGCGTCAGTTGAATCTATTACAACCAAAAGCTGTTCATGTTGT
CCCTTACCCACTACGATTTGTGGCATCTAAACCAGCCCCCTTCTTTGAGA
TCAGAGAAACTATGAAAGTTACGGATTTCTTGTTCAACCCAATgGTAATA
ATGATGGTGCTACCTTTGATATTCGTTGTCATTATGCCTAAAATGATGTC
AATGGCCGATCCTGAAGCCCAAAAGGAAATGCAAGAACAAATGGGAAAAT
ATAATCAGCCACAAATTCCTGAACTTTCTGAAATGTTTTCCAACATGTTT
GCTGGGGGAGCTGAGAAGAAACGTACCAAACCATCACTAGCATCATCGGA
TAGAGGTCCTGCTAAAAGATCAACTAAAAGACCAAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031620XLOC_031620Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049865-proteinTCONS_00049865-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049865-exon-scaffold_167-1491911889:78201..78375TCONS_00049865-exon-scaffold_167-1491911889:78201..78375Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1510915933:78201..78375TCONS_00049865-exon-scaffold_167-1510915933:78201..78375Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1575043694:78201..78375TCONS_00049865-exon-scaffold_167-1575043694:78201..78375Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1491911889:92177..92493TCONS_00049865-exon-scaffold_167-1491911889:92177..92493Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1510915933:92177..92493TCONS_00049865-exon-scaffold_167-1510915933:92177..92493Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1575043694:92177..92493TCONS_00049865-exon-scaffold_167-1575043694:92177..92493Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1491911889:92773..92825TCONS_00049865-exon-scaffold_167-1491911889:92773..92825Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1510915933:92773..92825TCONS_00049865-exon-scaffold_167-1510915933:92773..92825Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1575043694:92773..92825TCONS_00049865-exon-scaffold_167-1575043694:92773..92825Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1491911889:93598..93625TCONS_00049865-exon-scaffold_167-1491911889:93598..93625Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1510915933:93598..93625TCONS_00049865-exon-scaffold_167-1510915933:93598..93625Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1575043694:93598..93625TCONS_00049865-exon-scaffold_167-1575043694:93598..93625Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1491911889:94251..95364TCONS_00049865-exon-scaffold_167-1491911889:94251..95364Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1510915933:94251..95364TCONS_00049865-exon-scaffold_167-1510915933:94251..95364Clytia hemisphaericaexon
TCONS_00049865-exon-scaffold_167-1575043694:94251..95364TCONS_00049865-exon-scaffold_167-1575043694:94251..95364Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:78201..95364 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.7573	34.6469	44.3484	36.8186	7.89758	9.82899	8.34806	9.61834	44.3117	36.2149	39.4844	40.0176	36.0822	35.0403	30.1543	28.3084	34.801	38.221	33.8183	33.6696	17.7399	18.0787	24.9929	29.6603	16.4989	0.00337065	23.261	23.7205	23.0349	18.4446
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019008DUF2012
IPR013784Carb-bd-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
Blast
[Close]
BLAST of TCONS_00049865 vs. Swiss-Prot (Human)
Match: EMC7 (ER membrane protein complex subunit 7 OS=Homo sapiens GN=EMC7 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.459e-46
Identity = 81/176 (46.02%), Postives = 119/176 (67.61%), Query Frame = 1 
Query:  124 FKIEGKVSVSKDRSRPTDWQSETSILVDSGAYKGFLKSDGTFVINNIPSGSYIVEVASANYLFDRFRVDINKGGKIRARQLNLLQPKAVHVVPYPLRFVASKPAPFFEIRETMKVTDFLFNPMVIMMVLPLIFVVIMPKMMSMADPEAQKEMQEQMGKYN-QPQIPELSEMFSNMF 648
            FKIEG+  V     +P DW S   +LVD   + GFLK+DG+FV+++IPSGSY+VEV S  Y FD  RVDI   GK+RAR +N ++   V  +PYPL+  +S P  +F  RE+   TDFL NPMV+MMVLPL+  V++PK+++ +DP+ ++EM++ M   N   ++P++SE  + +F
Sbjct:   45 FKIEGRAVVPG--VKPQDWISAARVLVDGEEHVGFLKTDGSFVVHDIPSGSYVVEVVSPAYRFDPVRVDITSKGKMRARYVNYIKTSEVVRLPYPLQMKSSGPPSYFIKRESWGWTDFLMNPMVMMMVLPLLIFVLLPKVVNTSDPDMRREMEQSMNMLNSNHELPDVSEFMTRLF 218
The following BLAST results are available for this feature:
BLAST of TCONS_00049865 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EMC72.459e-4646.02ER membrane protein complex subunit 7 OS=Homo sapi... [more]
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