TCONS_00049860 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049860
Unique NameTCONS_00049860
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4304

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049860 ID=TCONS_00049860|Name=TCONS_00049860|organism=Clytia hemisphaerica|type=transcript|length=4304bp
CTTTTTAGTGTGATGAATGTGGTGTTATTAACCTGATGTCATGATGTATC
CATTTGTGATAAAATGATAGTTACACCAAAcacaataaatttcaaattAC
ACAATGAATAATGAAGATTCTGAGGATTCAGGAGAAGAACAATATCAAGG
TTACATTTCCATACCTTATGGTCCACAGGTTACTGCTGAATACGTTCATT
CATCGAAACACTGCGACTTCCAAGATGTCATTTACAACAGTAAAACTTAT
GACTATATCATTCTTGACTCTAGAGGCATCTCCAGCTGGCACCCAACTTG
TATCACAAGTACCATCAAACGTGCCATGGAATTTGAGGCTTACAAGTTCA
ATGTTTTGAGATGTTTATGTTATTCAAGATTCCATAACTTATACTTTGCT
TTGACAAAACATTTTGGAATCAACGTTTACAATTTGAATTTCCTTGAAAT
TTGTCATCAAGATGGAGATGGAGATTCGATTTCTAGACTTCTTTACAACG
ATAAAGAGAATGAACTGATAGCAATATGCagaaataaaatcaaattttta
aagtATGTCATGAAAGAAATGAAACCTTCAATTGCATTCCAAAGAGAATT
TAAAGTAGAAGAGTCATTGGTCCTTTCAAGTGCcaaatttgatgaagatt
taCAGCGTATTTACTTAATGTGTGACACTGACATTTTTTGTTACTCCCTG
GATGGTAAAGAATTGTTTTGCTTGAGAGGACCTAATTCTATTGCATACTT
TTGTGCATGTGCGTATTCTGATGAAGCCAATCTGATGGTTGCAGGTTCAA
TCAATGGAGAACTCAGTATTTATAGTCCAAATGGAGGGCTTGTGACAGCA
ATGTTAAGCCATTCAAAGATCATAACATCATTGCTTATTCACCCAAAAGA
CGGAACTATGTTTATTTCTGCGTCACTTGATGGCACtataaaagtgtttt
ctttGCAGATGTTGGGTGAAATTTACAGCATCCCTGTCTTTACAGAGGGA
ATCCTTTTCATGAAAGTATACAGTACAAACTCTTTATTTGCAGCATCACA
TAAAGGTATCCAAACGTTTGATTNAGATGTTGGGTGAAATTTACAGCATT
CCTGTCTTTACAGAGGGAATCCTTTTCATGAAAGTATACAGTACAAACTC
TTTATTTGCAGCATCACATAAAGGTATCCAAACGTTTGATTTGAACTATT
CCTTCAGATTCTGGAGCACAAGCCGTGCACCAGTCAAACACATGAATGTC
ACATCACCAATAGCTGGATTAAGACAGTATGTTGTTGTCTCCACTGCTGA
TAACAGTATCCGATTATTCAGCAAACACACTGGTCAACGACGCACAACAA
TTCTTCCACCACCGGAAATTCCCATTGGTGATGATGTAATATCTGTGGCA
TTTGATCGACAAGGACGTGTAATATACATCCTGTTCAAACCTTTACAGTT
GTGGATCTATTCAACACGCACAGATCCAGCCACTCGTGTTGCTACTTGGG
ATCTTGATCAAACTATCAAGCAAAGCAGAGAAGACCAATTCAAACATCTT
CCTGATGACGGAAATCATGGCCATTCGAGATTTGGTGCTAGCAGTCAAAG
TCAAAAACAAGCTGAAGCCAACATTACATGCTGCTCATTAACAACAATAA
AGAGGGAAGTTTTCAATACTGACTCATTATCCGACCAGGATTTATTTAAC
TTTGGTTTCCTACTGTGTGGACTGAGCAATGGTTTGATTTGCTTTCTTGA
TCCTTGTCAACGCGGCTTGATAGTCAAGTCACTCAAAGCTCATCCAACAA
GTCCAGTTGTCAACTTAAGGGTTGATTATTTGTCTACAGTAACTTACTTA
TTGGCTGTTATCGACACCATCAATGGGATAATGGTTCGTATTTGGAATGT
TGTTACCCTTGAATGTTGTCACCAGATGTTCTTCTTTGAAGACTTTACAC
AGTTTGTATTCAAAAATCTTCAGATTGTCGTTGGTTATTCTACTGGTCAC
ATTCACACTGAAACCATATTCCAAAATGATGTCGACAAAGAAACTCACAA
AATGCTAAAGTCTAACCCAATGAAGGAACACGATGGACATATTGTGAGTC
TTGATTTGTCTGATACCCGTCAAATATTCTGCTCTGTTGGTTCAGATAAT
TATGTCAGGGTATGGAATCTTAGCAAAGTCTTACTCGTGGAAATCAAGTT
TGACAACACCTTGAAGTATGCATTGTTTCTGAGCCATCTGGATGAGATAT
TGATCAGTTTCAAATCACAGTTGTTTGTGATTCCTTACCATATTGTTTTC
CAAAGACAGCAACTACCTACATTCAACACCACTTGTGACGATAGCAGTGG
CGATGAATCTTTTATCTTTGAGGATCCATTTGTTTGCAAGAGAAACATGT
TGCAATCGAACAATCCACCAATCAATTTGGCGAGTTATCTTGTTCCTTAT
CCACACCTTGGCCTNATCCATTTGTTTGCAAGAGAAACATGTTGCAATCG
AACAATCCACCAATCAATTTGGCGAGTTATCTTGTTCCTTATCCACACCT
TGGCCTCGAAACTCTTTGGATGTTCAATAAAGCTCTTGTTGATCCAATTC
CCAATGAAGAAATTGATGTAGACCTTATTGTTGCATCAGAATTGTCCTCC
GACAGCTTAGACTCATTTGCCAGTACCACCCTTTACCAAGATAGTGATGA
GAGTCAAGAAATAGATGTTGTAGATATACAATTTCCATCTTGTCTCAGCA
CTCCTGAGCCACTGCATTCCAAACAGCCACCAGTGGAACCCCTAAAGAAC
GACGTGGCTGAGGTTATTGATGCCAAATCAAACATTGATGTAGCAGGAAG
TATTCAAACCCATGGTGGTCTTGCCAAACCTACCAGCCCTGCCCCTCTAA
GCTATTACGATAAGATCCGCAATAAACAAACCTCGTTGCCGTCAAAGCCG
ATTTCGAATGAAAAAGAACAAACGCTGAATATAATGAAACCATATCCTTT
TGCCAGCATCGAAAGAAAGGATATTTANACGCTGAATATAATGAAACCAT
ATCCTTTTGCCAGCATCGAAAGAAAGGATATTTATAAAATTACTCCTCGC
GCCAAGAAGAAAACCAAACGGAAGTCAAAAACCAACAAGACAAAGTCGAA
ACCTACCAAATCAGCATCCGTCACAGGAAAGTCCAATTCCAAAACTTCCT
CTGAAGTTGCACCAAGTACATCATCTACCTTCTTGAAAGAATCAAACATC
CGTCAATCTGAGAAGAAACAAACCTCTAACGAATTATTGGAAGGCAAATG
TATAGATCTCAAAATCAAAGATTCTTCCAGTGTAACCCAAACCAGTTCCT
CAGCTTCGGATGAATCAAAATCGAGAACTACTAGCAATCAACGCTCTCTC
CTTTCAATGGCTCTGGGAAAACAGACGGACGATACTGCTTTGGTTTCATA
CAGAAATGTATTGGATTCTCTTGTCAACCCAGAAAGTGACAGGTCTGATA
TCGAAGGAACGAGGCCTTCTTCTGTTAAATTCAATCCGTTNGACAGGTCT
GATATCGAAGGAACGAGACCTTCTTCTGTTAAATTCAATCAGTGTGTAGC
TGAATTATCATCAGGTGACGAATCATTAATTAGTGATACAAGTGACGCCG
AGTTGAAAGCTTTGCGATTCAATGATGGAGCTAGTACTGCAAGTCGATCA
TCTCAAAGAACAATTTCCTCTTCCCGAAAGACACATTCTTTGAACATCAA
TGCAGACAGTGAAACCTACTTTACATCAGTTATCCTTAATCTCCGACAAT
CTAAAGCCCAAAAGCAGAATCAAAACCTTCGAGCCAATTCTCAGCAATCT
ACAACCCAACAAAAGATTCAACACCTTCGAACCAAATCCCAGCAATCCGA
AACTCAGCAACAGAATCAAAACAGCCGAGCCAATTCTCAGCAATCTACAA
CTCAACAAAAGATTCAACACCTCCGAGCCAATTCTCAGCAATCTACAACT
CAACAAAAGATTCAACACCTCCGAGTCAATTCTCAGCAATCTGAAACCCA
ACAACAGAGTCAACACCTCCGAGCCAATTCTCAGCAATCTGAAACCCAGG
AACAGAATCAAAACCTCCGAGCAAATTATCAGCAATCTACAACTCAACAA
AAGATTCAACACCTCCGAGCCAATTATCAGCAATCTGAAACCCAGCAATA
TAATCAAGATCTCGAAGCCAAAGTTCAACCATCTAAGGCCCGACAACAGA
ATCAAAACCCTCGAGCAAAGTTTCTGCAATCGAAATCCCAGCAACAGAAT
CGAG
Run BLAST on NCBI

protein sequence of TCONS_00049860-protein

>TCONS_00049860-protein ID=TCONS_00049860-protein|Name=TCONS_00049860-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MLQSNNPPINLASYLVPYPHLGLETLWMFNKALVDPIPNEEIDVDLIVAS
ELSSDSLDSFASTTLYQDSDESQEIDVVDIQFPSCLSTPEPLHSKQPPVE
PLKNDVAEVIDAKSNIDVAGSIQTHGGLAKPTSPAPLSYYDKIRNKQTSL
PSKPISNEKEQTLNIMKPYPFASIERKDIXTLNIMKPYPFASIERKDIYK
ITPRAKKKTKRKSKTNKTKSKPTKSASVTGKSNSKTSSEVAPSTSSTFLK
ESNIRQSEKKQTSNELLEGKCIDLKIKDSSSVTQTSSSASDESKSRTTSN
QRSLLSMALGKQTDDTALVSYRNVLDSLVNPESDRSDIEGTRPSSVKFNP
XDRSDIEGTRPSSVKFNQCVAELSSGDESLISDTSDAELKALRFNDGAST
ASRSSQRTISSSRKTHSLNINADSETYFTSVILNLRQSKAQKQNQNLRAN
SQQSTTQQKIQHLRTKSQQSETQQQNQNSRANSQQSTTQQKIQHLRANSQ
QSTTQQKIQHLRVNSQQSETQQQSQHLRANSQQSETQEQNQNLRANYQQS
TTQQKIQHLRANYQQSETQQYNQDLEAKVQPSKARQQNQNPRAKFLQSKS
QQQNR
Run BLAST on NCBI

transcript from alignment at scaffold_167:8558..13749+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049860 ID=TCONS_00049860|Name=TCONS_00049860|organism=Clytia hemisphaerica|type=transcript|length=5192bp|location=Sequence derived from alignment at scaffold_167:8558..13749+ (Clytia hemisphaerica)
CTTTTTAGTGTGATGAATGTGGTGTTATTAACCTGATGTCATGATGTATC CATTTGTGATAAAATGATAGTTACACCAAAcacaataaatttcaaattgt aaGTATTGCATgctttttctgtaaattctaaACTTTAATCATCACCATTA GCCTGGTTATGTGCCAACTGTAATCTACAGTCTCTAAAAGACTGTTTTCA TGATAATTTAGAACTTTTTCCTTTTATTCTAGACACAATGAATAATGAAG ATTCTGAGGATTCAGGAGAAGAACAATATCAAGGTTACATTTCCATACCT TATGGTCCACAGGTTACTGCTGAATACGTTCATTCATCGAAACACTGCGA CTTCCAAGATGTCATTTACAACAGTAAAACTTATGACTATATCATTCTTG ACTCTAGAGGCATCTCCAGCTGGCACCCAACTTGTATCACAAGTACCATC AAACGTGCCATGGAATTTGAGGCTTACAAGTTCAATGTTTTGAGATGTTT ATGTTATTCAAGATTCCATAACTTATACTTTGCTTTGACAAAACATTTTG GAATCAACGTTTACAATTTGAATTTCCTTGAAATTTGTCATCAAGATGGA GATGGAGATTCGATTTCTAGACTTCTTTACAACGATAAAGAGAATGAACT GATAGCAATATGCagaaataaaatcaaatttttaaagtATGTCATGAAAG AAATGAAACCTTCAATTGCATTCCAAAGAGAATTTAAAGTAGAAGAGTCA TTGGTCCTTTCAAGTGCcaaatttgatgaagatttaCAGCGTATTTACTT AATGTGTGACACTGACATTTTTTGTTACTCCCTGGATGGTAAAGAATTGT TTTGCTTGAGAGGACCTAATTCTATTGCATACTTTTGTGCATGTGCGTAT TCTGATGAAGCCAATCTGATGGTTGCAGGTTCAATCAATGGAGAACTCAG TATTTATAGTCCAAATGGAGGGCTTGTGACAGCAATGTTAAGCCATTCAA AGATCATAACATCATTGCTTATTCACCCAAAAGACGGAACTATGTTTATT TCTGCGTCACTTGATGGCACtataaaagtgttttctttGCAGATGTTGGG TGAAATTTACAGCATCCCTGTCTTTACAGAGGGAATCCTTTTCATGAAAG TATACAGTACAAACTCTTTATTTGCAGCATCACATAAAGGTATCCAAACG TTTGATTNAGATGTTGGGTGAAATTTACAGCATTCCTGTCTTTACAGAGG GAATCCTTTTCATGAAAGTATACAGTACAAACTCTTTATTTGCAGCATCA CATAAAGGTATCCAAACGTTTGATTTGAACTATTCCTTCAGATTCTGGAG CACAAGCCGTGCACCAGTCAAACACATGAATGTCACATCACCAATAGCTG GATTAAGACAGTATGTTGTTGTCTCCACTGCTGATAACAGTATCCGATTA TTCAGCAAACACACTGGTCAACGACGCACAACAATTCTTCCACCACCGGA AATTCCCATTGGTGATGATGTAATATCTGTGGCATTTGATCGACAAGGAC GTGTAATATACATCCTGTTCAAACCTTTACAGTTGTGGATCTATTCAACA CGCACAGATCCAGCCACTCGTGTTGCTACTTGGGATCTTGATCAAACTAT CAAGCAAAGCAGAGAAGACCAATTCAAACATCTTCCTGATGACGGAAATC ATGGCCATTCGAGATTTGGTGCTAGCAGTCAAAGTCAAAAACAAGCTGAA GCCAACATTACATGCTGCTCATTAACAACAATAAAGAGGGAAGTTTTCAA TACTGACTCATTATCCGACCAGGATTTATTTAACTTTGGTTTCCTACTGT GTGGACTGAGCAATGGTTTGATTTGCTTTCTTGATCCTTGTCAACGCGGC TTGATAGTCAAGTCACTCAAAGCTCATCCAACAAGTCCAGTTGTCAACTT AAGGGTTGATTATTTGTCTACAGTAACTTACTTATTGGCTGTTATCGACA CCATCAATGGGATAATGGTTCGTATTTGGAATGTTGTTACCCTTGAATGT TGTCACCAGATGTTCTTCTTTGAAGACTTTACACAGTTTGTATTCAAAAA TCTTCAGATTGTCGTTGGTTATTCTACTGGTCACATTCACACTGAAACCA TATTCCAAAATGATGTCGACAAAGAAACTCACAAAATGCTAAAGTCTAAC CCAATGAAGGAACACGATGGACATATTGTGAGTCTTGATTTGTCTGATAC CCGTCAAATATTCTGCTCTGTTGGTTCAGATAATTATGTCAGGGTATGGA ATCTTAGCAAAGTCTTACTCGTGGAAATCAAGTTTGACAACACCTTGAAG TATGCATTGTTTCTGAGCCATCTGGATGAGATATTGATCAGTTTCAAATC ACAGTTGTTTGTGATTCCTTACCATATTGTTTTCCAAAGACAGCAACTAC CTACATTCAACACCACTTGTGACGATAGCAGTGGCGATGAATCTTTTATC TTTGAGGATCCATTTGTTTGCAAGAGAAACATGTTGCAATCGAACAATCC ACCAATCAATTTGGCGAGTTATCTTGTTCCTTATCCACACCTTGGCCTNA TCCATTTGTTTGCAAGAGAAACATGTTGCAATCGAACAATCCACCAATCA ATTTGGCGAGTTATCTTGTTCCTTATCCACACCTTGGCCTCGAAACTCTT TGGATGTTCAATAAAGCTCTTGTTGATCCAATTCCCAATGAAGAAATTGA TGTAGACCTTATTGTTGCATCAGAATTGTCCTCCGACAGCTTAGACTCAT TTGCCAGTACCACCCTTTACCAAGATAGTGATGAGAGTCAAGAAATAGAT GTTGTAGATATACAATTTCCATCTTGTCTCAGCACTCCTGAGCCACTGCA TTCCAAACAGCCACCAGTGGAACCCCTAAAGAACGACGTGGCTGAGGTTA TTGATGCCAAATCAAACATTGATGTAGCAGGAAGTATTCAAACCCATGGT GGTCTTGCCAAACCTACCAGCCCTGCCCCTCTAAGCTATTACGATAAGAT CCGCAATAAACAAACCTCGTTGCCGTCAAAGCCGATTTCGAATGAAAAAG AACAAACGCTGAATATAATGAAACCATATCCTTTTGCCAGCATCGAAAGA AAGGATATTTANACGCTGAATATAATGAAACCATATCCTTTTGCCAGCAT CGAAAGAAAGGATATTTATAAAATTACTCCTCGCGCCAAGAAGAAAACCA AACGGAAGTCAAAAACCAACAAGACAAAGTCGAAACCTACCAAATCAGCA TCCGTCACAGGAAAGTCCAATTCCAAAACTTCCTCTGAAGTTGCACCAAG TACATCATCTACCTTCTTGAAAGAATCAAACATCCGTCAATCTGAGAAGA AACAAACCTCTAACGAATTATTGGAAGGCAAATGTATAGATCTCAAAATC AAAGATTCTTCCAGTGTAACCCAAACCAGTTCCTCAGCTTCGGATGAATC AAAATCGAGAACTACTAGCAATCAACGCTCTCTCCTTTCAATGGCTCTGG GAAAACAGACGGACGATACTGCTTTGGTTTCATACAGAAATGTATTGGAT TCTCTTGTCAACCCAGAAAGTGACAGGTCTGATATCGAAGGAACGAGGCC TTCTTCTGTTAAATTCAATCCGTTNGACAGGTCTGATATCGAAGGAACGA GACCTTCTTCTGTTAAATTCAATCAGTGTGTAGCTGAATTATCATCAGGT GACGAATCATTAATTAGTGATACAAGTGACGCCGAGTTGAAAGCTTTGCG ATTCAATGATGGAGCTAGTACTGCAAGTCGATCATCTCAAAGAACAATTT CCTCTTCCCGAAAGACACATTCTTTGAACATCAATGCAGACAGTGAAACC TACTTTACATCAGTTATCCTTAATCTCCGACAATCTAAAGCCCAAAAGCA GAATCAAAACCTTCGAGCCAATTCTCAGCAATCTACAACCCAACAAAAGA TTCAACACCTTCGAACCAAATCCCAGCAATCCGAAACTCAGCAACAGAAT CAAAACAGCCGAGCCAATTCTCAGCAATCTACAACTCAACAAAAGATTCA ACACCTCCGAGCCAATTCTCAGCAATCTACAACTCAACAAAAGATTCAAC ACCTCCGAGTCAATTCTCAGCAATCTGAAACCCAACAACAGAGTCAACAC CTCCGAGCCAATTCTCAGCAATCTGAAACCCAGGAACAGAATCAAAACCT CCGAGCAAATTATCAGCAATCTACAACTCAACAAAAGATTCAACACCTCC GAGCCAATTATCAGCAATCTGAAACCCAGCAATATAATCAAGATCTCGAA GCCAAATTTCAACCTTCTAAGGCCCAACAACAGAATCAAAACCCTCAAGC AAAGTTTCTGCAATCGAAATCCCAGCAACAGAATCGAGATCTCCTAACAA AAGCTCAACGGCTGCAAGATAAATCCAAGATTACCAAACCTGAAAGCCCA ATCAAATTGACAAGGGAGAAGAAATATTCTACAAATACCGAGAACGAAGT CATCAAGGTTGAAATTCGACCAAGTCAAACAGATCTCCATATCAATGACG AAGAAACTAACGAATCTCGACATATTGTTGAGAGACAACGAGATATGAAG AATAGCAGAAACAGTGGACGGTCATCTCGTTCTTCCCAAGATCCTGAGAT TCTTGATCCTTTGATGATTTCACCAGTTCGAGGTACCGACCCAAACAACA AAGAAGAATCTCCATTGATAATTAAGGATGAAGAAACTCAACGTGTAATG AAATACATCCTCAGCTCCTTTCGAAAGCCAGCATCGCCAATCAGAAATAA ACGATCACAATTCAGAACTGAGCTTGCTGAAAATACTAGAGACCCTGAAA GTGATTATGCTTCAGCAGGTGACTACGAATCATCCACCNCAAAAGATTCA ACACCTCCGAGCCAATTCACAGCAATCTGAAACCCAGCAACAGAATCAAA ACCTTCGAACCAATTCTCAGCAATCTACAACCCAACAAAAGATTCAACAC CTCCGAGCCAAATCCCAGCAATCTGAAACCCAACAACAGAATCATGATCT CCAGGCCAAAGTTCAACCATCTAAGGCCCGACAACAGAATCAAAACCCTC GAGCAAAGTTTCTGCAATCGAAATCCCAGCAACAGAATCGAG

Coding sequence (CDS) from alignment at scaffold_167:8558..13749+

>TCONS_00049860 ID=TCONS_00049860|Name=TCONS_00049860|organism=Clytia hemisphaerica|type=CDS|length=3630bp|location=Sequence derived from alignment at scaffold_167:8558..13749+ (Clytia hemisphaerica)
ATGTTGCAATCGAACAATCCACCAATCAATTTGGCGAGTTATCTTGTTCC
TTATCCACACCTTGGCCTCGAAACTCTTTGGATGTTCAATAAAGCTCTTG
TTGATCCAATTCCCAATGAAGAAATTGATGTAGACCTTATTGTTGCATCA
GAATTGTCCTCCGACAGCTTAGACTCATTTGCCAGTACCACCCTTTACCA
AGATAGTGATGAGAGTCAAGAAATAGATGTTGTAGATATACAATTTCCAT
CTTGTCTCAGCACTCCTGAGCCACTGCATTCCAAACAGCCACCAGTGGAA
CCCCTAAAGAACGACGTGGCTGAGGTTATTGATGCCAAATCAAACATTGA
TGTAGCAGGAAGTATTCAAACCCATGGTGGTCTTGCCAAACCTACCAGCC
CTGCCCCTCTAAGCTATTACGATAAGATCCGCAATAAACAAACCTCGTTG
CCGTCAAAGCCGATTTCGAATGAAAAAGAACAAACGCTGAATATAATGAA
ACCATATCCTTTTGCCAGCATCGAAAGAAAGGATATTTANACGCTGAATA
TAATGAAACCATATCCTTTTGCCAGCATCGAAAGAAAGGATATTTATAAA
ATTACTCCTCGCGCCAAGAAGAAAACCAAACGGAAGTCAAAAACCAACAA
GACAAAGTCGAAACCTACCAAATCAGCATCCGTCACAGGAAAGTCCAATT
CCAAAACTTCCTCTGAAGTTGCACCAAGTACATCATCTACCTTCTTGAAA
GAATCAAACATCCGTCAATCTGAGAAGAAACAAACCTCTAACGAATTATT
GGAAGGCAAATGTATAGATCTCAAAATCAAAGATTCTTCCAGTGTAACCC
AAACCAGTTCCTCAGCTTCGGATGAATCAAAATCGAGAACTACTAGCAAT
CAACGCTCTCTCCTTTCAATGGCTCTGGGAAAACAGACGGACGATACTGC
TTTGGTTTCATACAGAAATGTATTGGATTCTCTTGTCAACCCAGAAAGTG
ACAGGTCTGATATCGAAGGAACGAGGCCTTCTTCTGTTAAATTCAATCCG
TTNGACAGGTCTGATATCGAAGGAACGAGACCTTCTTCTGTTAAATTCAA
TCAGTGTGTAGCTGAATTATCATCAGGTGACGAATCATTAATTAGTGATA
CAAGTGACGCCGAGTTGAAAGCTTTGCGATTCAATGATGGAGCTAGTACT
GCAAGTCGATCATCTCAAAGAACAATTTCCTCTTCCCGAAAGACACATTC
TTTGAACATCAATGCAGACAGTGAAACCTACTTTACATCAGTTATCCTTA
ATCTCCGACAATCTAAAGCCCAAAAGCAGAATCAAAACCTTCGAGCCAAT
TCTCAGCAATCTACAACCCAACAAAAGATTCAACACCTTCGAACCAAATC
CCAGCAATCCGAAACTCAGCAACAGAATCAAAACAGCCGAGCCAATTCTC
AGCAATCTACAACTCAACAAAAGATTCAACACCTCCGAGCCAATTCTCAG
CAATCTACAACTCAACAAAAGATTCAACACCTCCGAGTCAATTCTCAGCA
ATCTGAAACCCAACAACAGAGTCAACACCTCCGAGCCAATTCTCAGCAAT
CTGAAACCCAGGAACAGAATCAAAACCTCCGAGCAAATTATCAGCAATCT
ACAACTCAACAAAAGATTCAACACCTCCGAGCCAATTATCAGCAATCTGA
AACCCAGCAATATAATCAAGATCTCGAAGCCAAAGTTCAACCATCTAAGG
CCCGACAACAGAATCAAAACCCTCGAGCAAAGTTTCTGCAATCGAAATCC
CAGCAACAGAATCGAATGTTGCAATCGAACAATCCACCAATCAATTTGGC
GAGTTATCTTGTTCCTTATCCACACCTTGGCCTCGAAACTCTTTGGATGT
TCAATAAAGCTCTTGTTGATCCAATTCCCAATGAAGAAATTGATGTAGAC
CTTATTGTTGCATCAGAATTGTCCTCCGACAGCTTAGACTCATTTGCCAG
TACCACCCTTTACCAAGATAGTGATGAGAGTCAAGAAATAGATGTTGTAG
ATATACAATTTCCATCTTGTCTCAGCACTCCTGAGCCACTGCATTCCAAA
CAGCCACCAGTGGAACCCCTAAAGAACGACGTGGCTGAGGTTATTGATGC
CAAATCAAACATTGATGTAGCAGGAAGTATTCAAACCCATGGTGGTCTTG
CCAAACCTACCAGCCCTGCCCCTCTAAGCTATTACGATAAGATCCGCAAT
AAACAAACCTCGTTGCCGTCAAAGCCGATTTCGAATGAAAAAGAACAAAC
GCTGAATATAATGAAACCATATCCTTTTGCCAGCATCGAAAGAAAGGATA
TTTANACGCTGAATATAATGAAACCATATCCTTTTGCCAGCATCGAAAGA
AAGGATATTTATAAAATTACTCCTCGCGCCAAGAAGAAAACCAAACGGAA
GTCAAAAACCAACAAGACAAAGTCGAAACCTACCAAATCAGCATCCGTCA
CAGGAAAGTCCAATTCCAAAACTTCCTCTGAAGTTGCACCAAGTACATCA
TCTACCTTCTTGAAAGAATCAAACATCCGTCAATCTGAGAAGAAACAAAC
CTCTAACGAATTATTGGAAGGCAAATGTATAGATCTCAAAATCAAAGATT
CTTCCAGTGTAACCCAAACCAGTTCCTCAGCTTCGGATGAATCAAAATCG
AGAACTACTAGCAATCAACGCTCTCTCCTTTCAATGGCTCTGGGAAAACA
GACGGACGATACTGCTTTGGTTTCATACAGAAATGTATTGGATTCTCTTG
TCAACCCAGAAAGTGACAGGTCTGATATCGAAGGAACGAGGCCTTCTTCT
GTTAAATTCAATCCGTTNGACAGGTCTGATATCGAAGGAACGAGACCTTC
TTCTGTTAAATTCAATCAGTGTGTAGCTGAATTATCATCAGGTGACGAAT
CATTAATTAGTGATACAAGTGACGCCGAGTTGAAAGCTTTGCGATTCAAT
GATGGAGCTAGTACTGCAAGTCGATCATCTCAAAGAACAATTTCCTCTTC
CCGAAAGACACATTCTTTGAACATCAATGCAGACAGTGAAACCTACTTTA
CATCAGTTATCCTTAATCTCCGACAATCTAAAGCCCAAAAGCAGAATCAA
AACCTTCGAGCCAATTCTCAGCAATCTACAACCCAACAAAAGATTCAACA
CCTTCGAACCAAATCCCAGCAATCCGAAACTCAGCAACAGAATCAAAACA
GCCGAGCCAATTCTCAGCAATCTACAACTCAACAAAAGATTCAACACCTC
CGAGCCAATTCTCAGCAATCTACAACTCAACAAAAGATTCAACACCTCCG
AGTCAATTCTCAGCAATCTGAAACCCAACAACAGAGTCAACACCTCCGAG
CCAATTCTCAGCAATCTGAAACCCAGGAACAGAATCAAAACCTCCGAGCA
AATTATCAGCAATCTACAACTCAACAAAAGATTCAACACCTCCGAGCCAA
TTATCAGCAATCTGAAACCCAGCAATATAATCAAGATCTCGAAGCCAAAG
TTCAACCATCTAAGGCCCGACAACAGAATCAAAACCCTCGAGCAAAGTTT
CTGCAATCGAAATCCCAGCAACAGAATCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031618XLOC_031618Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049860-proteinTCONS_00049860-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049860-exon-scaffold_167-1491911889:8558..8655TCONS_00049860-exon-scaffold_167-1491911889:8558..8655Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1510915933:8558..8655TCONS_00049860-exon-scaffold_167-1510915933:8558..8655Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1575043694:8558..8655TCONS_00049860-exon-scaffold_167-1575043694:8558..8655Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1491911889:8790..12907TCONS_00049860-exon-scaffold_167-1491911889:8790..12907Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1510915933:8790..12907TCONS_00049860-exon-scaffold_167-1510915933:8790..12907Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1575043694:8790..12907TCONS_00049860-exon-scaffold_167-1575043694:8790..12907Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1491911889:13662..13749TCONS_00049860-exon-scaffold_167-1491911889:13662..13749Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1510915933:13662..13749TCONS_00049860-exon-scaffold_167-1510915933:13662..13749Clytia hemisphaericaexon
TCONS_00049860-exon-scaffold_167-1575043694:13662..13749TCONS_00049860-exon-scaffold_167-1575043694:13662..13749Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:8558..13749 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.187126 0.129643 0.182108 0.1291 2.56546 2.4166 2.62176 3.31345 0.382308 1.31903 0.557835 1.1529 0 0.777362 0.543371 0.419865 0.876565 0.940393 0.14722 0.42553 0.34552 0.325325 0.0829624 0.432125 1.59404 1.34049 0 0.190525 0.485994 0.143182
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049860 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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