TCONS_00049851 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049851
Unique NameTCONS_00049851
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049851 ID=TCONS_00049851|Name=TCONS_00049851|organism=Clytia hemisphaerica|type=transcript|length=121bp
TAGGACTATTAAGAGGAATCATTTACAATCACTTACGTCGATATATTTCA
TTTGGGCTTTGGAAATATAtttgtctttttaaaaagcatgttAGCTTAAC
GTATTACTATTGAGATCCTCT
Run BLAST on NCBI

transcript from alignment at scaffold_166:572350..572470

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049851 ID=TCONS_00049851|Name=TCONS_00049851|organism=Clytia hemisphaerica|type=transcript|length=121bp|location=Sequence derived from alignment at scaffold_166:572350..572470 (Clytia hemisphaerica)
AGAGGATCTCAATAGTAATACGTTAAGCTaacatgctttttaaaaagaca
aaTATATTTCCAAAGCCCAAATGAAATATATCGACGTAAGTGATTGTAAA
TGATTCCTCTTAATAGTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031610XLOC_031610Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049851-exon-scaffold_166-1491911889:572350..572470TCONS_00049851-exon-scaffold_166-1491911889:572350..572470Clytia hemisphaericaexon
TCONS_00049851-exon-scaffold_166-1510915933:572350..572470TCONS_00049851-exon-scaffold_166-1510915933:572350..572470Clytia hemisphaericaexon
TCONS_00049851-exon-scaffold_166-1575043694:572350..572470TCONS_00049851-exon-scaffold_166-1575043694:572350..572470Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_166supercontigscaffold_166:572350..572470 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049851 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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